Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 8.8e-171 603.6 319 100.0
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 3.6e-108 395.6 268 77.6
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 2.6e-106 389.4 267 77.2
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 4.5e-106 388.7 267 72.7
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 5.8e-106 388.3 266 76.7
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 7.6e-106 387.9 267 72.7
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 1.3e-105 387.1 265 76.6
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 6.4e-105 384.8 266 76.3
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 1.4e-104 383.6 266 76.3
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 1.4e-104 383.6 268 73.1
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 1.9e-104 383.3 266 76.3
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 3.2e-104 382.5 318 68.2
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 3.2e-104 382.5 271 72.0
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 3.2e-104 382.5 271 72.0
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 9.3e-104 380.9 273 74.0
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.2e-103 380.6 266 74.8
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 2.1e-103 379.8 264 75.0
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 2.1e-103 379.8 267 74.5
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 2.7e-103 379.4 265 74.0
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 4.6e-103 378.6 266 74.1
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 7.9e-103 377.9 266 75.9
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 1.8e-102 376.7 265 75.1
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 5.1e-102 375.2 265 74.3
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 1.1e-101 374.0 265 74.0
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.5e-101 373.6 268 73.5
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 9.6e-101 370.9 268 73.1
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 1.3e-100 370.5 268 73.1
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 8.1e-100 367.9 267 72.7
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 1.1e-99 367.5 267 70.0
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 3.1e-99 365.9 269 75.5
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 4.0e-99 365.5 265 72.8
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 5.3e-99 365.2 272 71.0
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 5.3e-99 365.2 311 64.6
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 5.3e-99 365.2 325 63.4
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.2e-98 364.0 249 77.9
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 2.0e-98 363.2 286 69.2
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 4.5e-98 362.1 249 76.7
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 5.8e-98 361.7 318 62.9
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 5.8e-98 361.7 268 74.3
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 7.6e-98 361.3 264 71.2
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.0e-97 360.9 271 67.9
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.3e-97 360.5 268 70.9
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.3e-97 360.5 276 69.9
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.2e-97 359.8 268 70.5
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 2.9e-97 359.4 275 71.3
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 4.9e-97 358.6 271 67.5
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 6.5e-97 358.2 268 69.0
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 8.4e-97 357.8 270 73.0
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 8.4e-97 357.8 268 69.0
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 1.9e-96 356.7 298 65.8
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 4.2e-96 355.5 275 66.5
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 7.1e-96 354.8 268 70.1
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 1.2e-95 354.0 271 69.7
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 1.6e-95 353.6 268 69.0
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 1.6e-95 353.6 268 69.8
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 2.1e-95 353.2 270 70.7
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 3.5e-95 352.4 269 69.9
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 7.9e-95 351.3 290 66.2
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 7.9e-95 351.3 281 68.0
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.8e-94 350.1 272 68.4
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 3.0e-94 349.4 268 68.3
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 5.1e-94 348.6 265 70.2
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 5.1e-94 348.6 290 65.9
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 6.7e-94 348.2 269 66.9
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 1.9e-93 346.7 271 69.7
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 3.3e-93 345.9 268 70.5
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 4.3e-93 345.5 270 70.4
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 5.7e-93 345.1 247 70.4
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 7.4e-93 344.7 320 60.6
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.6e-92 343.6 269 67.3
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 1.6e-92 343.6 328 60.1
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 6.2e-92 341.7 310 58.4
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 6.2e-92 341.7 300 62.0
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 8.2e-92 341.3 261 70.9
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 3.1e-91 339.3 272 68.8
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 4.1e-91 339.0 257 68.5
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 1.2e-90 337.4 272 66.9
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 1.5e-90 337.0 289 65.7
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 4.5e-90 335.5 289 65.4
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 7.6e-90 334.7 291 61.5
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 1.0e-89 334.3 270 69.3
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 2.2e-89 333.2 315 56.8
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 1.6e-87 327.0 257 66.9
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 1.6e-87 327.0 284 61.3
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 4.6e-87 325.5 359 52.9
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 1.3e-86 323.9 249 66.7
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 3.9e-86 322.4 268 65.3
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.1e-85 320.9 274 65.3
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 3.3e-85 319.3 270 67.0
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 3.3e-85 319.3 268 64.6
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 1.6e-84 317.0 270 65.9
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 3.7e-84 315.8 235 68.9
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 1.4e-83 313.9 268 64.6
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 2.0e-82 310.1 228 69.3
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 2.2e-81 306.6 226 70.8
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 2.2e-81 306.6 226 70.8
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 3.6e-79 299.3 280 58.6
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 6.1e-79 298.5 229 69.4
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.4e-78 297.4 268 62.3
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 3.1e-75 286.2 271 63.1
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 3.4e-74 282.7 185 76.8
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 8.5e-73 278.1 191 76.4
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 3.6e-71 272.7 272 57.7
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.2e-66 257.7 281 54.4
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 2.6e-66 256.5 188 72.9
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 5.9e-66 255.4 177 76.3
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 6.5e-65 251.9 260 57.7
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 8.5e-65 251.5 277 49.8
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 6.7e-62 241.9 253 51.4
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 2.6e-61 240.0 251 53.4
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 1.3e-60 237.7 175 72.6
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 1.1e-43 181.4 132 73.5
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 3.1e-43 179.9 192 51.6
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 5.9e-42 175.6 172 48.8
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 1.7e-36 157.5 129 62.8
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 1.7e-33 147.5 126 60.3
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 9.5e-32 141.7 107 74.8
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.4e-30 137.9 146 55.5
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 1.9e-27 127.5 236 36.0
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 8.6e-25 118.6 95 64.2
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 3.6e-23 113.2 119 52.9
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 5.4e-19 99.4 78 65.4
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 3.3e-16 90.1 101 48.5
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 3.1e-14 83.6 86 58.1
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 4.4e-13 79.7 68 52.9
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-11 75.1 119 44.5
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 6.2e-07 59.3 65 58.5
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 8.1e-07 58.9 46 73.9
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-06 58.5 65 61.5
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 5.2e-06 56.2 115 37.4


User provided reference genes

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