Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0564G251 Amborella trichopoda HOM05D001472 ORTHO05D007811 2.7e-29 131.3 67 100.0
ATR1145G100 Amborella trichopoda HOM05D001472 ORTHO05D007811 1.4e-22 109.0 62 90.3
Ciclev10014735m.g Citrus clementina HOM05D001472 ORTHO05D007811 1.2e-13 79.3 62 64.5
QL01p003604 Quercus lobata HOM05D001472 ORTHO05D007811 1.2e-13 79.3 62 62.9
FvH4_3g45770 Fragaria vesca HOM05D001472 ORTHO05D007811 1.6e-13 79.0 62 62.9
FAN11G2456 Fragaria x ananassa HOM05D001472 ORTHO05D007811 1.6e-13 79.0 62 62.9
FAN21G3965 Fragaria x ananassa HOM05D001472 ORTHO05D007811 1.6e-13 79.0 62 62.9
Hund16176 Selenicereus undatus HOM05D001472 ORTHO05D007811 1.6e-13 79.0 61 62.3
GSVIVG01025473001 Vitis vinifera HOM05D001472 ORTHO05D007811 1.6e-13 79.0 62 61.3
Aqoxy5G00018 Aquilegia oxysepala HOM05D001472 ORTHO05D007811 2.1e-13 78.6 62 64.5
Cc01_g00140 Coffea canephora HOM05D001472 ORTHO05D007811 2.1e-13 78.6 61 65.6
Lalb_Chr13g0290681 Lupinus albus HOM05D001472 ORTHO05D007811 2.1e-13 78.6 62 61.3
Nn2g15862 Nelumbo nucifera HOM05D001472 ORTHO05D007811 2.7e-13 78.2 62 66.1
Oeu004752.1 Olea europaea HOM05D001472 ORTHO05D007811 2.7e-13 78.2 61 63.9
Dinv13475 Davidia involucrata HOM05D001472 ORTHO05D007811 3.5e-13 77.8 62 62.9
Sc09g0000050 Simmondsia chinensis HOM05D001472 ORTHO05D007811 3.5e-13 77.8 61 62.3
RcHm_v2.0_Chr5g0083841 Rosa chinensis HOM05D001472 ORTHO05D007811 6.0e-13 77.0 62 61.3
arahy.Tifrunner.gnm1.ann1.WM6SSU Arachis hypogaea HOM05D001472 ORTHO05D007811 7.9e-13 76.6 62 61.3
CSS0028494 Camellia sinensis var. sinensis HOM05D001472 ORTHO05D007811 7.9e-13 76.6 62 62.9
HanXRQChr13g0405211 Helianthus annuus HOM05D001472 ORTHO05D007811 7.9e-13 76.6 62 59.7
CAN.G1834.11 Capsicum annuum HOM05D001472 ORTHO05D007811 1.0e-12 76.3 61 62.3
Medtr8g007295 Medicago truncatula HOM05D001472 ORTHO05D007811 1.3e-12 75.9 62 59.7
SGA_v2.0_scaffold6G03312 Striga asiatica HOM05D001472 ORTHO05D007811 1.3e-12 75.9 61 60.7
Atru.chr3.2103 Acer truncatum HOM05D001472 ORTHO05D007811 1.8e-12 75.5 62 59.7
Atru.chr3.2118 Acer truncatum HOM05D001472 ORTHO05D007811 1.8e-12 75.5 62 59.7
Actinidia16242 Actinidia chinensis HOM05D001472 ORTHO05D007811 1.8e-12 75.5 62 61.3
Eucgr.J01764 Eucalyptus grandis HOM05D001472 ORTHO05D007811 1.8e-12 75.5 61 60.7
VMungo0331G0364 Vigna mungo HOM05D001472 ORTHO05D007811 1.8e-12 75.5 61 60.7
Lsat_1_v5_gn_6_52060 Lactuca sativa HOM05D001472 ORTHO05D007811 3.0e-12 74.7 62 61.3
TAR633G1259 Trochodendron aralioides HOM05D001472 ORTHO05D007811 3.0e-12 74.7 62 58.1
Cpa.g.sc119.38 Carica papaya HOM05D001472 ORTHO05D007811 3.9e-12 74.3 62 58.1
AUR62040899 Chenopodium quinoa HOM05D001472 ORTHO05D007811 3.9e-12 74.3 61 62.3
Duzib168G2316 Durio zibethinus HOM05D001472 ORTHO05D007811 3.9e-12 74.3 62 58.1
Oeu059655.1 Olea europaea HOM05D001472 ORTHO05D007811 3.9e-12 74.3 60 61.7
Ca_14801_v3 Cicer arietinum L. HOM05D001472 ORTHO05D007811 5.1e-12 73.9 62 59.7
Manes.03G087300 Manihot esculenta HOM05D001472 ORTHO05D007811 5.1e-12 73.9 62 61.3
Psat0s3030g0040 Pisum sativum HOM05D001472 ORTHO05D007811 5.1e-12 73.9 62 59.7
ECA233G2592 Erigeron canadensis HOM05D001472 ORTHO05D007811 6.7e-12 73.6 62 61.3
Rhsim13G0233000 Rhododendron simsii HOM05D001472 ORTHO05D007811 6.7e-12 73.6 62 58.1
PGSC0003DMG400032166 Solanum tuberosum HOM05D001472 ORTHO05D007811 6.7e-12 73.6 61 62.3
Glyma.03G109000 Glycine max HOM05D001472 ORTHO05D007811 8.7e-12 73.2 62 58.1
Nitab4.5_0006195g0050 Nicotiana tabacum HOM05D001472 ORTHO05D007811 8.7e-12 73.2 61 60.7
Phvul.011G015700 Phaseolus vulgaris HOM05D001472 ORTHO05D007811 8.7e-12 73.2 61 60.7
CiPaw.13G177500 Carya illinoinensis HOM05D001472 ORTHO05D007811 1.1e-11 72.8 60 63.3
Gohir.A08G014800 Gossypium hirsutum HOM05D001472 ORTHO05D007811 1.1e-11 72.8 60 60.0
Gohir.D08G025400 Gossypium hirsutum HOM05D001472 ORTHO05D007811 1.1e-11 72.8 60 60.0
Gorai.004G020700 Gossypium raimondii HOM05D001472 ORTHO05D007811 1.1e-11 72.8 60 60.0
Nitab4.5_0000551g0090 Nicotiana tabacum HOM05D001472 ORTHO05D007811 1.1e-11 72.8 61 60.7
AUR62042626 Chenopodium quinoa HOM05D001472 ORTHO05D007811 1.5e-11 72.4 60 61.7
Thecc.04G056800 Theobroma cacao HOM05D001472 ORTHO05D007811 1.5e-11 72.4 60 58.3
Lj2C498G7 Lonicera japonica HOM05D001472 ORTHO05D007811 1.9e-11 72.0 64 56.2
Lj2g0001026 Lotus japonicus HOM05D001472 ORTHO05D007811 1.9e-11 72.0 62 58.1
Rhsim05G0069400 Rhododendron simsii HOM05D001472 ORTHO05D007811 2.5e-11 71.6 62 56.5
EL10Ac4g10388 Beta vulgaris HOM05D001472 ORTHO05D007811 3.3e-11 71.2 60 56.7
MELO3C014727.2 Cucumis melo HOM05D001472 ORTHO05D007811 3.3e-11 71.2 61 55.7
CsaV3_4G017540 Cucumis sativus L. HOM05D001472 ORTHO05D007811 3.3e-11 71.2 61 55.7
DCAR_032192 Daucus carota HOM05D001472 ORTHO05D007811 3.3e-11 71.2 61 54.1
MD03G1003300 Malus domestica HOM05D001472 ORTHO05D007811 3.3e-11 71.2 62 54.8
arahy.Tifrunner.gnm1.ann1.NSES8Z Arachis hypogaea HOM05D001472 ORTHO05D007811 4.3e-11 70.9 62 58.1
Prupe.6G002900 Prunus persica HOM05D001472 ORTHO05D007811 4.3e-11 70.9 62 56.5
PGR119G2138 Punica granatum HOM05D001472 ORTHO05D007811 4.3e-11 70.9 59 55.9
Sabra03G0164900 Salix brachista HOM05D001472 ORTHO05D007811 7.4e-11 70.1 62 53.2
Sed0027407 Sechium edule HOM05D001472 ORTHO05D007811 7.4e-11 70.1 61 54.1
BcaC05g29175 Brassica carinata HOM05D001472 ORTHO05D007811 1.3e-10 69.3 62 58.1
A05p36040 Brassica napus HOM05D001472 ORTHO05D007811 1.3e-10 69.3 62 58.1
C05p54390 Brassica napus HOM05D001472 ORTHO05D007811 1.3e-10 69.3 62 58.1
BraA05t22411Z Brassica rapa HOM05D001472 ORTHO05D007811 1.3e-10 69.3 62 58.1
Phvul.010G046400 Phaseolus vulgaris HOM05D001472 ORTHO05D007811 1.3e-10 69.3 61 60.7
BolC5t34105H Brassica oleracea HOM05D001472 ORTHO05D007811 1.6e-10 68.9 62 58.1
Lj6C105T5 Lonicera japonica HOM05D001472 ORTHO05D007811 1.6e-10 68.9 64 54.7
Potri.003G221600 Populus trichocarpa HOM05D001472 ORTHO05D007811 1.6e-10 68.9 62 53.2
Sp3g11700 Schrenkiella parvula HOM05D001472 ORTHO05D007811 1.6e-10 68.9 62 59.7
CARHR088160 Cardamine hirsuta HOM05D001472 ORTHO05D007811 2.1e-10 68.6 62 58.1
MSTRG.12798 Avicennia marina HOM05D001472 ORTHO05D007811 2.8e-10 68.2 61 54.1
BcaB04g18767 Brassica carinata HOM05D001472 ORTHO05D007811 2.8e-10 68.2 62 58.1
Sed0020866 Sechium edule HOM05D001472 ORTHO05D007811 2.8e-10 68.2 60 53.3
Solyc01g005540.4 Solanum lycopersicum HOM05D001472 ORTHO05D007811 2.8e-10 68.2 60 60.0
Sopen01g001560 Solanum pennellii HOM05D001472 ORTHO05D007811 2.8e-10 68.2 60 60.0
AT3G13490 Arabidopsis thaliana HOM05D001472 ORTHO05D007811 3.7e-10 67.8 62 56.5
PSO541G5145 Papaver somniferum HOM05D001472 ORTHO05D007811 3.7e-10 67.8 62 59.7
PSO675G5228 Papaver somniferum HOM05D001472 ORTHO05D007811 3.7e-10 67.8 62 59.7
Thhalv10020319m.g Eutrema salsugineum HOM05D001472 ORTHO05D007811 4.8e-10 67.4 62 58.1
MD11G1003100 Malus domestica HOM05D001472 ORTHO05D007811 4.8e-10 67.4 62 53.2
AL3G25400 Arabidopsis lyrata HOM05D001472 ORTHO05D007811 6.2e-10 67.0 62 56.5
Carub.0003s1296 Capsella rubella HOM05D001472 ORTHO05D007811 6.2e-10 67.0 62 58.1
Os02g0623500 Oryza sativa ssp. japonica HOM05D001472 ORTHO05D007811 8.2e-10 66.6 61 55.7
THA.LOC104810321 Tarenaya hassleriana HOM05D001472 ORTHO05D007811 1.4e-09 65.9 62 54.8
CANSAT11G2257 Cannabis sativa HOM05D001472 ORTHO05D007811 4.0e-09 64.3 62 56.5
Zm00001eb063750 Zea mays HOM05D001472 ORTHO05D007811 4.0e-09 64.3 61 55.7
FAN16G2109 Fragaria x ananassa HOM05D001472 ORTHO05D007811 5.3e-09 63.9 90 43.3
Migut.N00550 Erythranthe guttata HOM05D001472 ORTHO05D007811 6.9e-09 63.5 61 50.8
FAN25G0602 Fragaria x ananassa HOM05D001472 ORTHO05D007811 6.9e-09 63.5 90 42.2
Mapoly0003s0001 Marchantia polymorpha HOM05D001472 ORTHO05D007811 6.9e-09 63.5 61 52.5
Aa31LG8G690 Aethionema arabicum HOM05D001472 ORTHO05D007811 1.5e-08 62.4 60 55.0
HPP92_024255 Vanilla planifolia HOM05D002427 ORTHO05D002818 2.6e-08 61.6 59 57.6
HPP92_024267 Vanilla planifolia HOM05D001472 ORTHO05D007811 2.6e-08 61.6 59 57.6
SMO358G0196 Selaginella moellendorffii HOM05D001472 ORTHO05D007811 4.5e-08 60.8 61 49.2
CBR_g46728 Chara braunii HOM05D001472 ORTHO05D007811 1.3e-07 59.3 60 51.7
Pp3c19_5720 Physcomitrium patens HOM05D001472 ORTHO05D007811 2.9e-07 58.2 61 47.5
SMO358G0031 Selaginella moellendorffii HOM05D001472 ORTHO05D007811 8.4e-07 56.6 58 48.3
AagrBONN_evm.TU.Sc2ySwM_228.4006 Anthoceros agrestis HOM05D001472 ORTHO05D007811 1.4e-06 55.8 60 53.3
MCO02G308 Micromonas commoda HOM05D001472 ORTHO05D007811 4.2e-06 54.3 70 50.0


User provided reference genes

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