Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0559G230 Amborella trichopoda HOM05D000104 ORTHO05D004363 7.9e-283 976.5 501 100.0
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 4.0e-234 814.7 626 73.2
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 2.8e-147 526.2 629 50.7
Dinv09442 Davidia involucrata HOM05D000104 ORTHO05D004363 1.1e-143 514.2 629 49.3
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 5.5e-143 511.9 628 49.8
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 2.1e-142 510.0 630 49.2
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 2.7e-142 509.6 626 48.7
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 4.6e-142 508.8 628 48.2
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 3.9e-141 505.8 629 48.3
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 6.7e-141 505.0 629 49.1
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 8.8e-141 504.6 629 49.0
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 1.5e-140 503.8 626 48.1
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 9.7e-140 501.1 629 48.8
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 1.7e-139 500.4 627 48.0
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 6.3e-139 498.4 630 48.1
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 4.1e-138 495.7 629 48.3
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 7.7e-137 491.5 629 48.2
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 1.0e-136 491.1 629 47.7
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 4.2e-135 485.7 689 44.7
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 7.2e-135 485.0 625 47.8
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 9.4e-135 484.6 626 48.4
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 1.0e-133 481.1 629 47.2
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 5.1e-133 478.8 629 47.7
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 5.1e-133 478.8 629 47.1
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 8.8e-133 478.0 627 47.7
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 2.6e-132 476.5 629 46.4
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 7.4e-132 474.9 632 46.8
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 2.8e-131 473.0 629 46.6
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 3.7e-131 472.6 626 46.2
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 8.2e-131 471.5 629 47.2
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 8.2e-131 471.5 629 45.5
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 1.1e-130 471.1 629 47.1
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.8e-130 470.3 629 46.4
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 7.0e-130 468.4 629 47.5
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 2.6e-129 466.5 629 46.4
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 3.5e-129 466.1 626 46.2
Nitab4.5_0002482g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 4.5e-129 465.7 618 46.4
FAN11G0644 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.0e-128 464.5 629 46.4
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 6.5e-128 461.8 629 46.1
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 1.1e-127 461.1 628 45.5
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 3.2e-127 459.5 628 46.0
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 9.4e-127 458.0 632 45.1
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 9.4e-127 458.0 628 46.5
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 6.1e-126 455.3 629 46.4
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 6.1e-126 455.3 629 44.4
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 1.0e-125 454.5 629 44.2
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 5.2e-125 452.2 629 44.7
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 6.7e-125 451.8 628 45.5
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 1.5e-124 450.7 627 45.0
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 1.5e-124 450.7 650 44.3
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 2.6e-124 449.9 628 45.1
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 4.4e-124 449.1 629 43.9
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 2.8e-123 446.4 626 45.7
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 1.4e-122 444.1 629 43.9
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 1.4e-122 444.1 636 45.3
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 1.8e-122 443.7 629 43.6
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 3.1e-122 443.0 630 43.7
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 5.3e-122 442.2 631 43.9
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 5.3e-122 442.2 629 45.3
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 7.0e-122 441.8 628 45.5
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 1.2e-121 441.0 631 43.7
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 1.2e-121 441.0 629 45.2
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 1.6e-121 440.7 626 45.7
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 2.0e-121 440.3 631 43.9
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 2.0e-121 440.3 554 47.8
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 4.5e-121 439.1 626 45.2
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 1.3e-120 437.6 631 43.6
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 1.3e-120 437.6 631 44.2
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 2.9e-120 436.4 629 44.5
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 1.5e-119 434.1 630 45.2
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 1.9e-119 433.7 629 45.2
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 1.2e-118 431.0 628 43.5
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 2.7e-118 429.9 637 44.9
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 4.7e-118 429.1 626 44.6
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 1.0e-117 427.9 629 43.2
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 1.0e-117 427.9 629 44.4
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 5.2e-117 425.6 630 43.7
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 1.2e-116 424.5 626 44.4
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 9.7e-116 421.4 629 44.4
unitig_92.g28135 Utricularia gibba HOM05D000104 ORTHO05D004363 2.7e-113 413.3 631 43.1
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 5.9e-113 412.1 656 42.1
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 1.9e-111 407.1 629 42.3
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 2.1e-110 403.7 629 42.6
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 4.7e-110 402.5 629 42.6
MD03G1000900 Malus domestica HOM05D000104 ORTHO05D004363 1.4e-106 391.0 574 43.0
vmacro00212 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 2.3e-101 373.6 565 42.3
Nitab4.5_0001131g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.1e-98 364.8 554 42.2
CsaV3_4G017750 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.4e-98 364.4 568 43.0
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 4.1e-98 362.8 589 42.4
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 1.5e-95 354.4 612 40.2
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 1.7e-88 330.9 636 37.4
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 7.3e-87 325.5 630 39.0
Cpa.g.sc73.36 Carica papaya HOM05D000104 ORTHO05D004363 2.1e-86 323.9 457 44.2
Solyc08g074500.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 9.8e-84 315.1 420 46.0
CARHR164210 Cardamine hirsuta HOM05D000104 ORTHO05D004363 2.8e-78 297.0 420 41.7
CsaV3_3G021060 Cucumis sativus L. HOM05D000104 ORTHO05D004363 3.6e-78 296.6 476 41.0
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 6.8e-77 292.4 614 37.0
Os02g0161300 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D004363 7.8e-73 278.9 420 43.3
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 4.9e-67 259.6 606 36.3
Peaxi162Scf00213g01724 Petunia axillaris HOM05D000104 ORTHO05D004363 6.9e-61 239.2 292 47.3
unitig_93.g30711 Utricularia gibba HOM05D000104 ORTHO05D004363 3.8e-59 233.4 314 49.4
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 6.7e-48 196.1 669 29.3
CARHR164200 Cardamine hirsuta HOM05D000104 ORTHO05D004363 5.3e-45 186.4 151 68.2
C04p38150 Brassica napus HOM05D000104 ORTHO05D004363 4.2e-42 176.8 150 66.0
SHI06788 Sapria himalayana HOM05D000104 ORTHO05D004363 8.2e-38 162.5 294 37.8
AagrBONN_evm.TU.Sc2ySwM_228.4035 Anthoceros agrestis HOM05D000104 ORTHO05D004363 1.5e-28 131.7 290 37.6
CsaV3_3G021050 Cucumis sativus L. HOM05D000104 ORTHO05D004363 3.6e-25 120.6 93 72.0
Cpa.g.sc73.37 Carica papaya HOM05D000104 ORTHO05D004363 1.3e-22 112.1 70 81.4
Oeu026040.2 Olea europaea HOM05D000104 ORTHO05D004363 4.8e-22 110.2 70 81.4
Solyc08g074520.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 1.1e-21 109.0 70 78.6
Nitab4.5_0023622g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.4e-21 108.6 70 80.0
CAN.G195.24 Capsicum annuum HOM05D000104 ORTHO05D004363 4.1e-21 107.1 70 78.6
vmacro00211 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 4.1e-21 107.1 70 78.6
Peaxi162Scf00213g01732 Petunia axillaris HOM05D000104 ORTHO05D004363 1.5e-20 105.1 70 75.7
SHI06790 Sapria himalayana HOM05D000190 ORTHO05D004363 1.7e-19 101.7 113 57.5
Lsat_1_v5_gn_7_28860 Lactuca sativa HOM05D000499 ORTHO05D006980 8.5e-19 99.4 70 72.9
Peaxi162Scf00213g01731 Petunia axillaris HOM05D000104 ORTHO05D004363 3.9e-16 90.5 76 61.8
Solyc08g074510.1 Solanum lycopersicum HOM05D000104 ORTHO05D004363 3.9e-16 90.5 77 62.3
CAN.G195.23 Capsicum annuum HOM05D000104 ORTHO05D004363 3.3e-15 87.4 76 60.5
BcaC02g09076 Brassica carinata HOM05D000104 ORTHO05D004363 2.8e-14 84.3 52 80.8
Nitab4.5_0011472g0010 Nicotiana tabacum HOM05D022199 ORTHO05D004363 6.3e-14 83.2 77 57.1
AagrBONN_evm.TU.Sc2ySwM_228.4068 Anthoceros agrestis HOM05D000104 ORTHO05D004363 1.8e-13 81.6 226 30.1
Cre16.g687301 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D004363 7.0e-13 79.7 149 33.6
BolC4t25391H Brassica oleracea HOM05D000104 ORTHO05D004363 9.4e-10 69.3 42 83.3
MCO02G056 Micromonas commoda HOM05D000104 ORTHO05D004363 6.3e-06 56.6 147 32.0


User provided reference genes

Program Settings