Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 0.0e+00 1713.0 847 100.0
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 7.9e-235 817.8 717 56.8
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 6.3e-224 781.6 716 55.9
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 6.3e-224 781.6 721 55.8
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 1.2e-222 777.3 719 55.1
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 2.0e-222 776.5 717 54.7
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 3.2e-220 769.2 717 54.5
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 1.2e-219 767.3 720 54.2
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 5.1e-218 761.9 717 53.8
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 8.8e-218 761.1 718 53.2
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 2.0e-217 760.0 716 53.9
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 4.4e-217 758.8 718 53.2
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 2.8e-216 756.1 717 54.3
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 6.3e-216 755.0 717 54.0
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 3.1e-215 752.7 720 53.6
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 5.3e-215 751.9 719 53.8
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 5.3e-215 751.9 718 52.9
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 1.3e-213 747.3 715 52.9
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 5.0e-213 745.3 720 54.0
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 1.1e-212 744.2 718 53.6
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 1.1e-212 744.2 717 53.3
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.6e-211 740.3 718 52.2
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.6e-211 740.3 717 53.1
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.1e-211 740.0 717 52.6
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 2.1e-211 740.0 718 52.6
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 3.9e-210 735.7 717 53.0
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 3.3e-209 732.6 720 52.2
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.3e-208 730.7 718 52.9
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.7e-208 730.3 719 52.3
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 3.7e-208 729.2 716 52.0
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 6.3e-208 728.4 717 52.3
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.8e-207 726.9 718 53.2
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 7.0e-207 724.9 717 52.3
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 1.2e-206 724.2 719 53.0
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 1.3e-205 720.7 719 51.6
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 1.1e-204 717.6 723 54.6
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 4.2e-204 715.7 716 51.7
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 4.7e-203 712.2 719 51.3
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 6.1e-203 711.8 719 52.2
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 8.0e-203 711.4 717 51.5
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 1.0e-202 711.1 721 52.3
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 1.4e-202 710.7 739 51.2
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 1.4e-202 710.7 718 50.7
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 1.8e-202 710.3 739 50.2
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 2.0e-201 706.8 717 51.2
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 2.0e-201 706.8 722 51.5
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 2.0e-201 706.8 717 51.0
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.3e-200 704.1 720 51.4
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.7e-200 703.7 723 51.0
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 2.8e-200 703.0 717 51.0
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 4.8e-200 702.2 717 51.9
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 8.2e-200 701.4 714 51.0
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 1.8e-199 700.3 722 50.3
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.4e-199 699.9 719 50.5
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 2.4e-199 699.9 717 51.7
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 3.1e-199 699.5 719 50.8
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 9.1e-199 698.0 718 53.3
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 2.0e-198 696.8 718 50.8
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 2.7e-198 696.4 718 51.1
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 5.9e-198 695.3 718 51.9
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 1.0e-197 694.5 719 49.9
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.7e-197 693.7 763 50.5
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.9e-196 690.3 717 51.0
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 2.5e-196 689.9 722 50.1
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 2.7e-195 686.4 722 49.7
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.8e-194 683.7 717 50.6
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 1.2e-193 681.0 694 51.3
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 7.5e-193 678.3 716 49.3
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 3.7e-192 676.0 688 51.0
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 1.1e-191 674.5 717 49.2
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 5.5e-188 662.1 718 49.3
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 7.2e-188 661.8 718 49.0
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 9.5e-188 661.4 718 48.6
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.2e-187 661.0 719 48.8
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.8e-186 657.1 719 48.5
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 2.0e-185 653.7 803 45.6
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 3.4e-185 652.9 631 52.5
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 9.8e-185 651.4 718 48.3
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 2.2e-184 650.2 718 48.3
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 4.9e-184 649.0 720 51.7
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 9.2e-183 644.8 745 47.1
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 4.5e-182 642.5 722 48.3
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.9e-182 642.1 626 54.3
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.9e-182 642.1 626 54.3
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 2.3e-181 640.2 718 47.2
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 3.9e-181 639.4 732 47.1
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 5.6e-180 635.6 662 49.5
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 1.6e-179 634.0 722 47.4
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 1.8e-178 630.6 719 46.2
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 1.7e-176 624.0 621 52.3
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 3.7e-176 622.9 630 53.5
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.2e-175 619.8 629 52.9
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 3.0e-173 613.2 599 53.4
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 2.8e-171 606.7 718 46.5
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 2.3e-170 603.6 714 47.8
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.3e-168 597.8 718 45.3
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 5.2e-162 575.9 716 44.7
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 2.0e-161 573.9 629 49.8
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 1.2e-142 511.5 729 40.9
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 1.3e-141 508.1 556 48.6
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 5.6e-140 502.7 700 41.4
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 8.7e-133 478.8 769 38.6
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 6.9e-130 469.2 721 40.8
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 4.9e-128 463.0 551 47.5
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 7.9e-118 429.1 491 49.1
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 2.8e-115 420.6 461 47.7
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 1.5e-113 414.8 464 47.4
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 6.3e-107 392.9 404 53.7
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 3.2e-103 380.6 295 60.0
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 2.0e-92 344.7 405 48.4
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 3.7e-83 313.9 232 61.6
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.5e-79 300.1 232 57.8
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 7.2e-79 299.7 232 57.8
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.4e-77 295.4 307 50.2
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 2.0e-76 291.6 796 28.6
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 5.0e-72 276.9 490 39.2
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 5.9e-65 253.4 186 60.8
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 2.1e-62 245.0 255 49.8
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 4.4e-60 237.3 243 49.8
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 3.1e-53 214.5 387 39.5
Solyc11g020180.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 4.3e-47 194.1 144 60.4
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.2e-45 187.2 251 41.8
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 5.4e-42 177.2 129 61.2
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 6.6e-40 170.2 150 52.0
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.5e-39 169.1 241 43.2
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.7e-32 145.6 172 50.0
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 3.3e-31 141.4 172 48.8
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 7.3e-31 140.2 176 46.6
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 9.6e-31 139.8 233 42.1
SEGI_03850 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 5.8e-28 130.6 134 47.0
FAN06G2580 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.5e-20 104.4 90 45.6
MCO09G726 Micromonas commoda HOM05D005539 ORTHO05D006644 3.5e-17 94.7 663 21.9
Cre06.g278900 Chlamydomonas reinhardtii HOM05D005539 ORTHO05D006644 1.6e-09 69.3 224 27.7
BolC3t14133H Brassica oleracea HOM05D001640 ORTHO05D001612 5.1e-08 64.3 72 47.2
Solyc11g020170.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.5e-07 62.8 65 44.6
C03p17190 Brassica napus HOM05D001640 ORTHO05D001612 5.7e-07 60.8 73 47.9


User provided reference genes

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