Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0064G012 Amborella trichopoda HOM05D003939 ORTHO05D013368 5.0e-57 224.2 110 100.0
ATR0035G002 Amborella trichopoda HOM05D003939 ORTHO05D013368 1.8e-51 205.7 124 85.5
ATR1045G001 Amborella trichopoda HOM05D003939 ORTHO05D013368 3.6e-39 164.9 82 98.8
TAR371G1006 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.9e-16 89.4 71 60.6
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 2.5e-16 89.0 70 62.9
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 5.6e-16 87.8 81 54.3
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 3.6e-15 85.1 73 56.2
CiPaw.03G089600 Carya illinoinensis HOM05D003939 ORTHO05D005979 6.2e-15 84.3 67 62.7
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 1.1e-14 83.6 69 60.9
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 4.0e-14 81.6 67 62.7
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 5.2e-14 81.3 67 61.2
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 9.0e-14 80.5 72 56.9
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 9.0e-14 80.5 82 50.0
Atru.chr8.420 Acer truncatum HOM05D003939 ORTHO05D013368 1.2e-13 80.1 70 58.6
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 1.2e-13 80.1 94 47.9
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 2.6e-13 79.0 73 53.4
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 7.6e-13 77.4 67 58.2
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 1.7e-12 76.3 67 56.7
Hma1.2p1_0481F.1_g162040 Hydrangea macrophylla HOM05D003939 ORTHO05D013368 1.7e-12 76.3 79 50.6
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 2.2e-12 75.9 67 56.7
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 2.2e-12 75.9 67 56.7
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.9e-12 75.5 81 50.6
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 4.9e-12 74.7 66 57.6
MBI19_g03794_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D013368 4.9e-12 74.7 69 55.1
Nitab4.5_0001637g0020 Nicotiana tabacum HOM05D003939 ORTHO05D013368 4.9e-12 74.7 64 54.7
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 4.9e-12 74.7 71 53.5
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 6.4e-12 74.3 69 52.2
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 6.4e-12 74.3 69 53.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 6.4e-12 74.3 65 55.4
Gohir.1Z049344 Gossypium hirsutum HOM05D003939 ORTHO05D005979 6.4e-12 74.3 67 55.2
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 6.4e-12 74.3 67 55.2
Nitab4.5_0002960g0020 Nicotiana tabacum HOM05D003939 ORTHO05D013368 6.4e-12 74.3 66 53.0
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 6.4e-12 74.3 69 55.1
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 8.4e-12 73.9 65 53.8
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 8.4e-12 73.9 76 52.6
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 8.4e-12 73.9 89 47.2
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 8.4e-12 73.9 66 57.6
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.1e-11 73.6 71 52.1
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.9e-11 72.8 71 52.1
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.9e-11 72.8 71 52.1
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.9e-11 72.8 69 52.2
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 1.9e-11 72.8 67 52.2
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 2.4e-11 72.4 70 57.1
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.4e-11 72.4 70 57.1
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 2.4e-11 72.4 64 57.8
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 2.4e-11 72.4 70 54.3
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 2.4e-11 72.4 76 55.3
TAR629G2192 Trochodendron aralioides HOM05D003939 ORTHO05D013368 2.4e-11 72.4 71 53.5
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.2e-11 72.0 70 57.1
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.2e-11 72.0 70 57.1
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.2e-11 72.0 70 57.1
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 3.2e-11 72.0 71 50.7
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 3.2e-11 72.0 66 60.6
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 3.2e-11 72.0 66 60.6
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 5.4e-11 71.2 69 53.6
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 5.4e-11 71.2 70 54.3
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 5.4e-11 71.2 66 53.0
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 7.1e-11 70.9 71 50.7
Solyc03g059400.1 Solanum lycopersicum HOM05D003939 ORTHO05D013368 7.1e-11 70.9 65 56.9
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 7.1e-11 70.9 70 54.3
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 7.1e-11 70.9 64 50.0
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 9.3e-11 70.5 65 55.4
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 1.6e-10 69.7 69 53.6
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 1.6e-10 69.7 71 50.7
Glyma.19G029100 Glycine max HOM05D003939 ORTHO05D005979 1.6e-10 69.7 71 50.7
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 2.1e-10 69.3 64 53.1
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 2.1e-10 69.3 71 50.7
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 2.7e-10 68.9 64 54.7
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 4.6e-10 68.2 67 47.8
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 1.0e-09 67.0 69 50.7
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 2.3e-09 65.9 69 50.7
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 3.0e-09 65.5 65 47.7
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 3.0e-09 65.5 71 52.1
HPP92_012253 Vanilla planifolia HOM05D003939 ORTHO05D005979 3.0e-09 65.5 79 46.8
HPP92_012298 Vanilla planifolia HOM05D003939 ORTHO05D005979 3.0e-09 65.5 79 46.8
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 5.1e-09 64.7 70 50.0
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 8.7e-09 63.9 64 50.0
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 1.1e-08 63.5 70 48.6
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 3.3e-08 62.0 69 46.4
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 3.3e-08 62.0 72 45.8
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 3.3e-08 62.0 68 47.1
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 4.3e-08 61.6 64 48.4
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 4.3e-08 61.6 69 47.8
ClCG07G007370 Citrullus lanatus HOM05D003939 ORTHO05D005979 5.6e-08 61.2 72 45.8
Oeu007060.1 Olea europaea HOM05D003939 ORTHO05D005979 7.3e-08 60.8 70 48.6
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 9.6e-08 60.5 72 45.8
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 9.6e-08 60.5 64 46.9
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 2.1e-07 59.3 71 45.1
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 2.8e-07 58.9 69 44.9
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 4.8e-07 58.2 88 40.9
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 1.4e-06 56.6 92 39.1
C09p61560 Brassica napus HOM05D003939 ORTHO05D013368 1.8e-06 56.2 70 42.9
BolC9t58995H Brassica oleracea HOM05D003939 ORTHO05D013368 1.8e-06 56.2 70 42.9
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 1.8e-06 56.2 77 42.9
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 3.1e-06 55.5 70 42.9
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 3.1e-06 55.5 70 42.9
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 3.1e-06 55.5 72 44.4


User provided reference genes

Program Settings