Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0026G010 Amborella trichopoda HOM05D004528 ORTHO05D005815 3.1e-50 201.4 97 100.0
Mapoly0005s0151 Marchantia polymorpha HOM05D004528 ORTHO05D005815 3.1e-34 148.3 81 84.0
FvH4_1g07290 Fragaria vesca HOM05D004528 ORTHO05D005815 6.9e-34 147.1 80 85.0
FAN19G1322 Fragaria x ananassa HOM05D004528 ORTHO05D005815 6.9e-34 147.1 80 85.0
MELO3C004622.2 Cucumis melo HOM05D004528 ORTHO05D005815 9.0e-34 146.7 77 88.3
RcHm_v2.0_Chr2g0093221 Rosa chinensis HOM05D004528 ORTHO05D005815 9.0e-34 146.7 80 87.5
MBI01_g09956_MAGBIO Magnolia biondii HOM05D004528 ORTHO05D005815 1.5e-33 146.0 80 86.2
AUR62033986 Chenopodium quinoa HOM05D004528 ORTHO05D005815 2.0e-33 145.6 80 85.0
EL10Ac8g19227 Beta vulgaris HOM05D004528 ORTHO05D005815 3.4e-33 144.8 80 86.2
QL02p062827 Quercus lobata HOM05D004528 ORTHO05D005815 3.4e-33 144.8 80 86.2
Actinidia25256 Actinidia chinensis HOM05D004528 ORTHO05D005815 4.5e-33 144.4 80 85.0
DCAR_011978 Daucus carota HOM05D004528 ORTHO05D005815 4.5e-33 144.4 80 85.0
MD15G1206300 Malus domestica HOM05D004528 ORTHO05D005815 4.5e-33 144.4 80 86.2
Nn6g35452 Nelumbo nucifera HOM05D004528 ORTHO05D005815 4.5e-33 144.4 81 84.0
Eucgr.C00900 Eucalyptus grandis HOM05D004528 ORTHO05D005815 5.8e-33 144.1 80 85.0
Lj7A674G30 Lonicera japonica HOM05D004528 ORTHO05D005815 5.8e-33 144.1 80 86.2
Prupe.7G211100 Prunus persica HOM05D004528 ORTHO05D005815 5.8e-33 144.1 80 86.2
Rhsim05G0022000 Rhododendron simsii HOM05D004528 ORTHO05D005815 5.8e-33 144.1 80 85.0
GSVIVG01015212001 Vitis vinifera HOM05D004528 ORTHO05D005815 5.8e-33 144.1 80 85.0
CiPaw.03G217000 Carya illinoinensis HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
Duzib150G1454 Durio zibethinus HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
Gohir.A06G072200 Gossypium hirsutum HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
Gohir.D06G070800 Gossypium hirsutum HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
Gorai.010G082500 Gossypium raimondii HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
Manes.16G102700 Manihot esculenta HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
Thecc.09G090300 Theobroma cacao HOM05D004528 ORTHO05D005815 7.6e-33 143.7 80 85.0
COL.COLO4_18209 Corchorus olitorius HOM05D004528 ORTHO05D005815 9.9e-33 143.3 76 88.2
FAN23G0078 Fragaria x ananassa HOM05D004528 ORTHO05D005815 9.9e-33 143.3 80 82.5
FAN26G1375 Fragaria x ananassa HOM05D004528 ORTHO05D005815 9.9e-33 143.3 80 82.5
SEGI_06455 Sequoiadendron giganteum HOM05D004528 ORTHO05D005815 9.9e-33 143.3 80 82.5
SGA_v2.0_scaffold62G21604 Striga asiatica HOM05D004528 ORTHO05D005815 9.9e-33 143.3 80 83.8
ClCG11G001780 Citrullus lanatus HOM05D004528 ORTHO05D005815 1.3e-32 142.9 80 83.8
CsaV3_2G001490 Cucumis sativus L. HOM05D004528 ORTHO05D005815 1.3e-32 142.9 80 83.8
Hma1.2p1_0800F.1_g220090 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 1.3e-32 142.9 80 83.8
Hma1.2p1_0800F.1_g220100 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 1.3e-32 142.9 80 83.8
Oeu018425.1 Olea europaea HOM05D004528 ORTHO05D005815 1.3e-32 142.9 80 83.8
SalBow6G2464 Salvia bowleyana HOM05D004528 ORTHO05D005815 1.3e-32 142.9 80 83.8
vmacro17227 Vaccinium macrocarpon HOM05D004528 ORTHO05D005815 1.3e-32 142.9 71 94.4
BcaB08g34873 Brassica carinata HOM05D004528 ORTHO05D005815 2.2e-32 142.1 80 85.0
CSS0033534 Camellia sinensis var. sinensis HOM05D004528 ORTHO05D005815 2.2e-32 142.1 80 83.8
Haze_25904 Corylus avellana HOM05D004528 ORTHO05D005815 2.2e-32 142.1 69 97.1
ECA240G0155 Erigeron canadensis HOM05D004528 ORTHO05D005815 2.2e-32 142.1 80 85.0
Lsat_1_v5_gn_7_37341 Lactuca sativa HOM05D004528 ORTHO05D005815 2.2e-32 142.1 80 85.0
MD02G1077700 Malus domestica HOM05D004528 ORTHO05D005815 2.2e-32 142.1 80 85.0
Potri.006G221700 Populus trichocarpa HOM05D004528 ORTHO05D005815 2.2e-32 142.1 80 83.8
Cc06_g11330 Coffea canephora HOM05D004528 ORTHO05D005815 2.9e-32 141.7 80 83.8
PSO063G0639 Papaver somniferum HOM05D004528 ORTHO05D005815 2.9e-32 141.7 80 82.5
PSO832G3660 Papaver somniferum HOM05D004528 ORTHO05D005815 2.9e-32 141.7 80 82.5
Sed0012435 Sechium edule HOM05D004528 ORTHO05D005815 2.9e-32 141.7 80 82.5
Dinv36760 Davidia involucrata HOM05D004528 ORTHO05D005815 3.8e-32 141.4 80 83.8
FAN26G2732 Fragaria x ananassa HOM05D004528 ORTHO05D005815 3.8e-32 141.4 80 81.2
Oeu018237.1 Olea europaea HOM05D004528 ORTHO05D005815 3.8e-32 141.4 80 81.2
Sc18g0002070 Simmondsia chinensis HOM05D004528 ORTHO05D005815 3.8e-32 141.4 80 83.8
Atru.chr7.1579 Acer truncatum HOM05D004528 ORTHO05D005815 4.9e-32 141.0 80 83.8
THA.LOC104820025 Tarenaya hassleriana HOM05D004528 ORTHO05D005815 4.9e-32 141.0 80 83.8
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea HOM05D004528 ORTHO05D005815 6.4e-32 140.6 80 83.8
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea HOM05D004528 ORTHO05D005815 6.4e-32 140.6 80 83.8
CDE02G2136 Ceratophyllum demersum HOM05D004528 ORTHO05D005815 6.4e-32 140.6 76 86.8
Lalb_Chr13g0299741 Lupinus albus HOM05D004528 ORTHO05D005815 6.4e-32 140.6 80 83.8
Psat3g072560 Pisum sativum HOM05D004528 ORTHO05D005815 6.4e-32 140.6 80 83.8
FAN28G2769 Fragaria x ananassa HOM05D004528 ORTHO05D005815 8.4e-32 140.2 80 81.2
HPP92_010492 Vanilla planifolia HOM05D004528 ORTHO05D005815 8.4e-32 140.2 80 82.5
HPP92_010493 Vanilla planifolia HOM05D004528 ORTHO05D005815 8.4e-32 140.2 80 82.5
AL3G48690 Arabidopsis lyrata HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
AT2G19560 Arabidopsis thaliana HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
MSTRG.17774 Avicennia marina HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 82.5
BcaC06g36598 Brassica carinata HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
A07p01200 Brassica napus HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
A07p01220 Brassica napus HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
C07p02330 Brassica napus HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
BolC7t40641H Brassica oleracea HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
BraA07t27910Z Brassica rapa HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
Carub.0003s3385 Capsella rubella HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
CARHR109990 Cardamine hirsuta HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
Ciclev10008462m.g Citrus clementina HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 82.5
Thhalv10022707m.g Eutrema salsugineum HOM05D004528 ORTHO05D005815 1.1e-31 139.8 80 83.8
Phvul.003G137300 Phaseolus vulgaris HOM05D004528 ORTHO05D005815 1.1e-31 139.8 71 93.0
VMungo1215G0680 Vigna mungo HOM05D004528 ORTHO05D005815 1.1e-31 139.8 71 93.0
Glyma.13G103500 Glycine max HOM05D004528 ORTHO05D005815 1.4e-31 139.4 71 93.0
Glyma.17G055500 Glycine max HOM05D004528 ORTHO05D005815 1.4e-31 139.4 71 93.0
Pp3c17_12810 Physcomitrium patens HOM05D004528 ORTHO05D005815 1.4e-31 139.4 80 78.8
TAR626G1836 Trochodendron aralioides HOM05D004528 ORTHO05D005815 1.4e-31 139.4 76 86.8
unitig_748.g7306 Utricularia gibba HOM05D004528 ORTHO05D005815 1.9e-31 139.0 79 81.0
Aa31LG8G16570 Aethionema arabicum HOM05D004528 ORTHO05D005815 2.4e-31 138.7 80 80.0
AagrBONN_evm.TU.Sc2ySwM_344.906 Anthoceros agrestis HOM05D004528 ORTHO05D005815 2.4e-31 138.7 80 78.8
BcaC05g26001 Brassica carinata HOM05D004528 ORTHO05D005815 2.4e-31 138.7 80 82.5
C05p19590 Brassica napus HOM05D004528 ORTHO05D005815 2.4e-31 138.7 80 82.5
BolC5t30662H Brassica oleracea HOM05D004528 ORTHO05D005815 2.4e-31 138.7 80 82.5
Lj4g0008156 Lotus japonicus HOM05D004528 ORTHO05D005815 2.4e-31 138.7 69 94.2
TPR.G3725 Trifolium pratense HOM05D004528 ORTHO05D005815 2.4e-31 138.7 69 94.2
TWI34G0432 Tripterygium wilfordii HOM05D004528 ORTHO05D005815 2.4e-31 138.7 80 81.2
Aqoxy7G01232 Aquilegia oxysepala HOM05D004528 ORTHO05D005815 3.2e-31 138.3 76 84.2
CANSAT56G0596 Cannabis sativa HOM05D004528 ORTHO05D005815 3.2e-31 138.3 80 83.8
CANSAT56G1313 Cannabis sativa HOM05D004528 ORTHO05D005815 3.2e-31 138.3 80 83.8
CAN.G1208.1 Capsicum annuum HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
Migut.J00603 Erythranthe guttata HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
Nitab4.5_0005634g0070 Nicotiana tabacum HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
Nitab4.5_0011030g0010 Nicotiana tabacum HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
Os09g0386400 Oryza sativa ssp. japonica HOM05D004528 ORTHO05D005815 9.3e-31 136.7 79 78.5
SHI24590 Sapria himalayana HOM05D004528 ORTHO05D005815 9.3e-31 136.7 88 77.3
Solyc07g039210.4 Solanum lycopersicum HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
Sopen07g017560 Solanum pennellii HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
PGSC0003DMG400013151 Solanum tuberosum HOM05D004528 ORTHO05D005815 9.3e-31 136.7 80 80.0
Peaxi162Scf00709g00003 Petunia axillaris HOM05D004528 ORTHO05D005815 1.2e-30 136.3 80 78.8
Zm00001eb311810 Zea mays HOM05D004528 ORTHO05D005815 6.0e-30 134.0 79 77.2
BcaB03g16744 Brassica carinata HOM05D004528 ORTHO05D005815 7.9e-30 133.7 77 84.4
PGR142G0229 Punica granatum HOM05D004528 ORTHO05D005815 1.3e-29 132.9 80 80.0
SMO117G0048 Selaginella moellendorffii HOM05D004528 ORTHO05D005815 1.8e-29 132.5 81 72.8
Medtr7g091650 Medicago truncatula HOM05D004528 ORTHO05D005815 9.6e-28 126.7 69 88.4
Sp3g32930 Schrenkiella parvula HOM05D004528 ORTHO05D005815 1.3e-27 126.3 83 75.9
CARHR054270 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.1e-27 125.6 80 72.5
BcaB03g16690 Brassica carinata HOM05D004528 ORTHO05D005815 1.2e-25 119.8 97 66.0
BcaB03g16691 Brassica carinata HOM05D004528 ORTHO05D005815 1.2e-25 119.8 97 66.0
AUR62027494 Chenopodium quinoa HOM05D004528 ORTHO05D005815 6.7e-21 104.0 52 92.3
Ca_08460_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 1.5e-20 102.8 52 92.3
BcaB04g16932 Brassica carinata HOM05D004528 ORTHO05D005815 1.9e-20 102.4 82 65.9
CARHR052830 Cardamine hirsuta HOM05D004528 ORTHO05D005815 3.3e-20 101.7 71 64.8
Sabra06G0171200 Salix brachista HOM05D004528 ORTHO05D005815 1.3e-19 99.8 82 64.6
BcaB04g16933 Brassica carinata HOM05D004528 ORTHO05D005815 1.4e-18 96.3 82 62.2
PGSC0003DMG400022053 Solanum tuberosum HOM05D004528 ORTHO05D005815 9.0e-18 93.6 58 74.1
CBR_g78884 Chara braunii HOM05D004528 ORTHO05D005815 5.5e-15 84.3 69 55.1
CARHR122310 Cardamine hirsuta HOM05D004528 ORTHO05D005815 6.3e-11 70.9 44 72.7
MCO16G315 Micromonas commoda HOM05D004528 ORTHO05D005815 8.5e-08 60.5 65 38.5
Cre02.g110400 Chlamydomonas reinhardtii HOM05D004528 ORTHO05D005815 2.5e-07 58.9 73 38.4
PRCOL_00001383 Prasinoderma coloniale HOM05D004528 ORTHO05D005815 3.2e-07 58.5 80 37.5
CARHR052790 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.1e-06 55.8 33 75.8
MD15G1352000 Malus domestica HOM05D004528 ORTHO05D005815 6.1e-06 54.3 58 55.2


User provided reference genes

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