Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37415 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.0e-131 473.4 238 100.0
AT5G39750 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.6e-74 282.7 165 88.5
AL7G50480 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.5e-58 230.3 165 76.4
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 2.6e-58 229.6 165 76.4
AT5G38740 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 6.4e-57 224.9 162 72.8
AL7G50550 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.4e-56 223.8 165 74.5
AT5G41200 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.5e-55 219.2 164 70.1
AT5G39810 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 4.3e-53 212.2 164 72.0
AT5G40220 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.6e-52 209.1 165 69.7
AT5G40120 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.5e-50 203.8 165 69.1
Carub.0007s3561 Capsella rubella HOM05D006887 ORTHO05D004325 5.2e-43 178.7 163 63.2
Carub.0007s3594 Capsella rubella HOM05D006887 ORTHO05D004325 1.1e-40 171.0 167 61.1
Carub.0003s3325 Capsella rubella HOM05D006887 ORTHO05D004325 1.9e-40 170.2 162 59.3
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 3.5e-39 166.0 185 54.1
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 3.0e-38 162.9 186 53.8
Carub.0007s3559 Capsella rubella HOM05D006887 ORTHO05D004325 3.9e-38 162.5 161 58.4
AT5G65330 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 6.4e-33 145.2 166 51.8
Thhalv10005313m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.6e-31 140.6 190 43.7
AT4G11250 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.7e-30 137.1 166 47.6
AL8G42910 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 5.1e-30 135.6 163 50.3
Carub.0007s3592 Capsella rubella HOM05D006887 ORTHO05D004325 5.1e-30 135.6 143 59.4
C04p46390 Brassica napus HOM05D006887 ORTHO05D004325 1.9e-29 133.7 144 52.8
BraA04t16959Z Brassica rapa HOM05D006887 ORTHO05D004325 2.5e-29 133.3 143 53.8
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 7.3e-29 131.7 143 53.1
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 9.6e-29 131.3 146 54.1
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 6.2e-28 128.6 146 54.1
BolC4t26260H Brassica oleracea HOM05D006887 ORTHO05D004325 8.1e-28 128.3 146 52.7
BraA04t16961Z Brassica rapa HOM05D006887 ORTHO05D004325 8.1e-28 128.3 144 53.5
BcaB06g27442 Brassica carinata HOM05D006887 ORTHO05D004325 1.4e-27 127.5 143 54.5
BolC4t26255H Brassica oleracea HOM05D006887 ORTHO05D004325 1.4e-27 127.5 146 50.7
Sp2g28440 Schrenkiella parvula HOM05D006887 ORTHO05D004325 1.8e-27 127.1 185 44.3
BraA04t16949Z Brassica rapa HOM05D006887 ORTHO05D004325 2.4e-27 126.7 161 46.0
A04p13000 Brassica napus HOM05D006887 ORTHO05D004325 3.1e-27 126.3 144 52.8
A04p12860 Brassica napus HOM05D006887 ORTHO05D004325 9.0e-27 124.8 161 45.3
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 1.2e-26 124.4 146 50.7
C04p46750 Brassica napus HOM05D006887 ORTHO05D004325 2.0e-26 123.6 165 47.9
BolC4t26262H Brassica oleracea HOM05D006887 ORTHO05D004325 2.0e-26 123.6 165 47.9
Thhalv10028281m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 2.0e-26 123.6 146 56.2
BcaC03g18328 Brassica carinata HOM05D006887 ORTHO05D004325 3.4e-26 122.9 166 45.2
C02p64040 Brassica napus HOM05D006887 ORTHO05D004325 3.4e-26 122.9 166 45.2
BolC2t12470H Brassica oleracea HOM05D006887 ORTHO05D004325 3.4e-26 122.9 166 45.2
C04p46670 Brassica napus HOM05D006887 ORTHO05D004325 9.9e-26 121.3 146 48.6
A02p43880 Brassica napus HOM05D006887 ORTHO05D004325 1.3e-25 120.9 165 44.2
BraA02t09311Z Brassica rapa HOM05D006887 ORTHO05D004325 1.3e-25 120.9 165 44.2
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 2.9e-25 119.8 144 51.4
CARHR058360 Cardamine hirsuta HOM05D006887 ORTHO05D004325 3.2e-24 116.3 179 43.0
Carub.0003s1843 Capsella rubella HOM05D006887 ORTHO05D004325 1.7e-22 110.5 178 42.1
BcaB06g27392 Brassica carinata HOM05D008478 ORTHO05D000740 5.1e-22 109.0 143 49.7
Carub.0008s2621 Capsella rubella HOM05D006887 ORTHO05D004325 1.9e-21 107.1 166 43.4
CARHR094030 Cardamine hirsuta HOM05D006887 ORTHO05D004325 5.6e-21 105.5 169 40.8
AT3G18650 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.6e-20 104.0 172 40.7
CARHR157630 Cardamine hirsuta HOM05D006887 ORTHO05D004325 3.6e-20 102.8 162 42.6
BcaC05g28586 Brassica carinata HOM05D006887 ORTHO05D004325 1.5e-18 97.4 168 39.9
BolC5t33421H Brassica oleracea HOM05D006887 ORTHO05D004325 1.5e-18 97.4 168 39.9
AL3G31960 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 2.2e-17 93.6 170 36.5
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 3.8e-17 92.8 109 50.5
BraA05t21939Z Brassica rapa HOM05D006887 ORTHO05D004325 3.8e-17 92.8 166 39.8
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 2.4e-16 90.1 179 38.0
Carub.0006s2465 Capsella rubella HOM05D007946 ORTHO05D004325 4.2e-16 89.4 175 37.7
Carub.0006s2523 Capsella rubella HOM05D007946 ORTHO05D004325 4.2e-16 89.4 165 40.0
AT5G40070 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.2e-15 87.8 127 47.2
BcaB06g25916 Brassica carinata HOM05D006887 ORTHO05D004325 1.2e-15 87.8 167 35.9
AT4G02235 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.6e-15 87.4 164 38.4
BcaB04g20759 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-15 87.4 166 39.2
BcaC09g48822 Brassica carinata HOM05D006887 ORTHO05D004325 1.0e-14 84.7 171 36.8
C01p45590 Brassica napus HOM05D006887 ORTHO05D004325 1.0e-14 84.7 171 36.8
BolC1t04520H Brassica oleracea HOM05D006887 ORTHO05D004325 1.0e-14 84.7 171 36.8
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 1.8e-14 84.0 169 39.1
CARHR283740 Cardamine hirsuta HOM05D006887 ORTHO05D004325 3.0e-14 83.2 173 37.0
BcaC01g03686 Brassica carinata HOM05D006887 ORTHO05D004325 5.1e-14 82.4 157 36.9
C03p49630 Brassica napus HOM05D006887 ORTHO05D004325 5.1e-14 82.4 157 36.9
BcaB06g27440 Brassica carinata HOM05D006887 ORTHO05D004325 7.4e-13 78.6 47 72.3
CARHR279290 Cardamine hirsuta HOM05D006887 ORTHO05D004325 1.3e-12 77.8 129 41.9
THA.LOC104805962 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 6.2e-12 75.5 145 33.8
THA.LOC104801507 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 1.4e-11 74.3 145 33.8
Thhalv10022126m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 2.4e-11 73.6 179 36.9
A01p35810 Brassica napus HOM05D006887 ORTHO05D004325 4.0e-11 72.8 121 42.1
AL6G40080 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 6.9e-11 72.0 163 31.9
BraA01t03660Z Brassica rapa HOM05D006887 ORTHO05D004325 9.0e-11 71.6 121 41.3
THA.LOC104810872 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 1.5e-10 70.9 145 32.4
AL6G38970 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 7.6e-10 68.6 165 36.4
Sp5g22080 Schrenkiella parvula HOM05D007946 ORTHO05D004325 7.6e-10 68.6 181 32.0
AT5G26950 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 1.7e-09 67.4 166 34.3
Thhalv10002808m.g Eutrema salsugineum HOM05D007946 ORTHO05D004325 1.7e-09 67.4 129 37.2
AL6G40090 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 2.2e-09 67.0 165 32.7
Thhalv10005435m.g Eutrema salsugineum HOM05D007946 ORTHO05D004325 2.9e-09 66.6 214 29.9
AT5G27070 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 4.9e-09 65.9 166 33.7
CARHR262050 Cardamine hirsuta HOM05D006887 ORTHO05D004325 4.9e-09 65.9 52 55.8
Thhalv10005452m.g Eutrema salsugineum HOM05D007946 ORTHO05D004325 6.4e-09 65.5 120 35.0
AL6G38960 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 8.4e-09 65.1 162 33.3
BcaB01g00130 Brassica carinata HOM05D007946 ORTHO05D004325 8.4e-09 65.1 162 28.4
AT5G27580 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 1.1e-08 64.7 164 33.5
BcaC08g43051 Brassica carinata HOM05D007946 ORTHO05D004325 1.1e-08 64.7 159 32.7
AT5G27944 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 4.2e-08 62.8 168 31.0
CARHR186490 Cardamine hirsuta HOM05D007946 ORTHO05D004325 4.2e-08 62.8 78 44.9
BraA04t16923Z Brassica rapa HOM05D006887 ORTHO05D004325 9.3e-08 61.6 82 48.8
CARHR186690 Cardamine hirsuta HOM05D007946 ORTHO05D004325 9.3e-08 61.6 93 41.9
THA.LOC109116042 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 9.3e-08 61.6 129 33.3
Sp1g35160 Schrenkiella parvula HOM05D007946 ORTHO05D004325 1.6e-07 60.8 138 34.1
THA.LOC109116041 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.1e-07 60.5 125 33.6
A09p48100 Brassica napus HOM05D007946 ORTHO05D004325 2.7e-07 60.1 159 30.8
THA.LOC104804829 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.7e-07 60.1 125 32.0
AT5G27050 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 3.5e-07 59.7 74 47.3
Aa31LG8G6760 Aethionema arabicum HOM05D006887 ORTHO05D004325 1.3e-06 57.8 137 27.0
PSO541G0906 Papaver somniferum HOM05D000307 ORTHO05D000166 1.3e-06 57.8 163 29.4
AT5G26865 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 3.9e-06 56.2 63 50.8
BolC8t50656H Brassica oleracea HOM05D007946 ORTHO05D004325 6.7e-06 55.5 169 30.2


User provided reference genes

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