Gene: Sp5g22080
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp5g22080
- Transcript Identifier Sp5g22080.1
- Gene Type Coding gene
- Location ch5-6 : 103291-104208 : negative
Gene Family Information
- ID HOM05D007946
- #Genes/#Species 79/10
- Phylogenetic origin
- ID ORTHO05D004325
- #Genes/#Species 184/17
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Sp5g22080.v2.2
- pacid 45086388
Descriptions
- Description PTHR11945//PTHR11945:SF240 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000981 | IEA | InterPro | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000987 | IEA | InterPro | cis-regulatory region sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G27580 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G27090 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G27070 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |