Gene: AT5G40070
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G40070
- Transcript Identifier AT5G40070.1
- Gene Type Coding gene
- Location Chr5 : 16039179-16039747 : positive
Gene Family Information
- ID HOM05D006887
- #Genes/#Species 117/25
- Phylogenetic origin
- ID ORTHO05D004325
- #Genes/#Species 184/17
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G40070.1
- uniprot F4KFY2
Descriptions
- Description MADS-box family protein
- Computational description MADS-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: AGAMOUS-like 75 (TAIR:AT5G41200.1); Has 52 Blast hits to 49 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D006887 |
| GO:0046983 | ISO | PLAZA Homology (enrichment) | protein dimerization activity | HOM05D006887 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |