Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G17290 Arabidopsis thaliana HOM05D006076 ORTHO05D007506 1.1e-198 696.4 338 100.0
AL6G28370 Arabidopsis lyrata HOM05D006076 ORTHO05D007506 3.1e-190 668.3 338 96.2
CARHR195920 Cardamine hirsuta HOM05D006076 ORTHO05D007506 2.6e-181 638.6 338 90.8
Carub.0006s1548 Capsella rubella HOM05D006076 ORTHO05D007506 4.2e-179 631.3 341 90.3
Thhalv10014026m.g Eutrema salsugineum HOM05D006076 ORTHO05D007506 6.0e-178 627.5 341 88.9
Sp6g26940 Schrenkiella parvula HOM05D006076 ORTHO05D007506 2.1e-175 619.0 339 88.2
BcaB08g36791 Brassica carinata HOM05D006076 ORTHO05D007506 3.8e-172 608.2 337 88.1
BcaC04g18810 Brassica carinata HOM05D006076 ORTHO05D007506 2.5e-171 605.5 338 87.6
BcaC03g18547 Brassica carinata HOM05D006076 ORTHO05D007506 3.2e-171 605.1 337 86.4
C02p08950 Brassica napus HOM05D006076 ORTHO05D007506 2.7e-170 602.1 338 86.1
BolC2t06804H Brassica oleracea HOM05D006076 ORTHO05D007506 2.7e-170 602.1 338 86.1
BraA02t05373Z Brassica rapa HOM05D006076 ORTHO05D007506 7.9e-170 600.5 338 85.8
A02p04100 Brassica napus HOM05D006076 ORTHO05D007506 2.3e-169 599.0 338 85.5
BolC9t58826H Brassica oleracea HOM05D006076 ORTHO05D007506 1.5e-168 596.3 338 86.4
BraA10t44270Z Brassica rapa HOM05D006076 ORTHO05D007506 1.3e-167 593.2 339 86.4
A10p22110 Brassica napus HOM05D006076 ORTHO05D007506 1.6e-167 592.8 339 86.4
Aa31LG11G12390 Aethionema arabicum HOM05D006076 ORTHO05D007506 3.1e-166 588.6 345 82.9
C09p59900 Brassica napus HOM05D006076 ORTHO05D007506 4.6e-162 574.7 383 76.2
THA.LOC104820862 Tarenaya hassleriana HOM05D006076 ORTHO05D007506 2.9e-156 555.4 345 78.6
TWI53G1019 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 2.8e-135 485.7 358 65.1
TWI74G1437 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 1.5e-131 473.4 357 63.3
Dinv19079 Davidia involucrata HOM05D006076 ORTHO05D007506 2.5e-131 472.6 359 63.8
Lalb_Chr17g0345871 Lupinus albus HOM05D006076 ORTHO05D007506 3.2e-131 472.2 344 64.8
Ciclev10005246m.g Citrus clementina HOM05D006076 ORTHO05D007506 9.5e-131 470.7 357 64.7
GSVIVG01013049001 Vitis vinifera HOM05D006076 ORTHO05D007506 6.1e-130 468.0 343 64.7
TPR.G5335 Trifolium pratense HOM05D006076 ORTHO05D007506 4.0e-129 465.3 344 63.4
Rhsim10G0185200 Rhododendron simsii HOM05D006076 ORTHO05D007506 5.2e-129 464.9 361 62.9
Thecc.04G060400 Theobroma cacao HOM05D006076 ORTHO05D007506 6.8e-129 464.5 359 62.4
MD08G1242300 Malus domestica HOM05D006076 ORTHO05D007506 2.0e-128 463.0 359 62.7
CiPaw.11G066500 Carya illinoinensis HOM05D006076 ORTHO05D007506 4.4e-128 461.8 350 63.7
MD15G1436000 Malus domestica HOM05D006076 ORTHO05D007506 5.7e-128 461.5 363 63.1
LjContig00141g0009861 Lotus japonicus HOM05D006076 ORTHO05D007506 7.5e-128 461.1 340 63.8
QL04p075342 Quercus lobata HOM05D006076 ORTHO05D007506 9.8e-128 460.7 352 63.1
Glyma.14G210200 Glycine max HOM05D006076 ORTHO05D007506 2.8e-127 459.1 339 63.1
SGA_v2.0_scaffold115G32050 Striga asiatica HOM05D006076 ORTHO05D007506 2.8e-127 459.1 334 65.6
COL.COLO4_20049 Corchorus olitorius HOM05D006076 ORTHO05D007506 4.9e-127 458.4 359 62.4
arahy.Tifrunner.gnm1.ann1.T03I92 Arachis hypogaea HOM05D006076 ORTHO05D007506 6.3e-127 458.0 348 63.5
DCAR_003407 Daucus carota HOM05D006076 ORTHO05D007506 1.1e-126 457.2 358 62.0
Nitab4.5_0002648g0050 Nicotiana tabacum HOM05D006076 ORTHO05D007506 1.4e-126 456.8 355 63.1
Manes.01G123200 Manihot esculenta HOM05D006076 ORTHO05D007506 1.8e-126 456.4 360 62.5
Cc07_g12790 Coffea canephora HOM05D006076 ORTHO05D007506 2.4e-126 456.1 364 59.3
arahy.Tifrunner.gnm1.ann1.19NIP2 Arachis hypogaea HOM05D006076 ORTHO05D007506 5.4e-126 454.9 346 63.0
RcHm_v2.0_Chr7g0220631 Rosa chinensis HOM05D006076 ORTHO05D007506 2.0e-125 453.0 363 61.4
Gohir.D11G176000 Gossypium hirsutum HOM05D006076 ORTHO05D007506 2.7e-125 452.6 359 61.3
Nitab4.5_0000005g0100 Nicotiana tabacum HOM05D006076 ORTHO05D007506 4.5e-125 451.8 355 62.0
FAN08G1959 Fragaria x ananassa HOM05D006076 ORTHO05D007506 5.9e-125 451.4 363 60.3
Phvul.008G241000 Phaseolus vulgaris HOM05D006076 ORTHO05D007506 5.9e-125 451.4 340 62.6
PGR042G3996 Punica granatum HOM05D006076 ORTHO05D007506 5.9e-125 451.4 358 61.7
Sopen02g011760 Solanum pennellii HOM05D006076 ORTHO05D007506 5.9e-125 451.4 355 60.6
FvH4_5g28670 Fragaria vesca HOM05D006076 ORTHO05D007506 7.7e-125 451.1 356 61.0
CSS0031022 Camellia sinensis var. sinensis HOM05D006076 ORTHO05D007506 1.0e-124 450.7 368 62.0
Glyma.02G240700 Glycine max HOM05D006076 ORTHO05D007506 1.3e-124 450.3 340 63.2
TAR629G1722 Trochodendron aralioides HOM05D006076 ORTHO05D007506 1.3e-124 450.3 365 60.5
FAN18G0334 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.7e-124 449.9 356 61.0
Ca_05760_v3 Cicer arietinum L. HOM05D006076 ORTHO05D007506 2.3e-124 449.5 344 62.5
Potri.017G139700 Populus trichocarpa HOM05D006076 ORTHO05D007506 2.3e-124 449.5 356 61.8
VMungo0647G0600 Vigna mungo HOM05D006076 ORTHO05D007506 3.8e-124 448.7 335 63.9
FAN04G0499 Fragaria x ananassa HOM05D006076 ORTHO05D007506 5.0e-124 448.4 363 60.3
Lsat_1_v5_gn_3_67061 Lactuca sativa HOM05D006076 ORTHO05D007506 5.0e-124 448.4 332 64.5
Sabra17G0117900 Salix brachista HOM05D006076 ORTHO05D007506 5.0e-124 448.4 355 61.7
Eucgr.J01641 Eucalyptus grandis HOM05D006076 ORTHO05D007506 8.6e-124 447.6 360 60.8
Psat2g042920 Pisum sativum HOM05D006076 ORTHO05D007506 8.6e-124 447.6 344 61.0
Manes.02G080800 Manihot esculenta HOM05D006076 ORTHO05D007506 1.1e-123 447.2 351 61.3
Medtr5g076920 Medicago truncatula HOM05D006076 ORTHO05D007506 1.2e-122 443.7 354 59.6
Actinidia17164 Actinidia chinensis HOM05D006076 ORTHO05D007506 1.6e-122 443.4 362 61.9
HanXRQChr16g0532291 Helianthus annuus HOM05D006076 ORTHO05D007506 2.1e-122 443.0 337 63.2
MSTRG.15638 Avicennia marina HOM05D006076 ORTHO05D007506 1.5e-120 436.8 351 60.1
Migut.K00743 Erythranthe guttata HOM05D006076 ORTHO05D007506 3.4e-120 435.6 342 62.6
Hma1.2p1_0034F.1_g021380 Hydrangea macrophylla HOM05D006076 ORTHO05D007506 9.8e-120 434.1 359 59.3
CANSAT11G2533 Cannabis sativa HOM05D006076 ORTHO05D007506 1.3e-119 433.7 360 58.1
Sc09g0004490 Simmondsia chinensis HOM05D006076 ORTHO05D007506 2.9e-119 432.6 356 56.5
AUR62004772 Chenopodium quinoa HOM05D006076 ORTHO05D007506 6.4e-119 431.4 350 60.3
unitig_0.g2639 Utricularia gibba HOM05D006076 ORTHO05D007506 6.4e-119 431.4 356 59.0
Solyc02g036380.3 Solanum lycopersicum HOM05D006076 ORTHO05D007506 8.3e-119 431.0 403 53.3
MELO3C019565.2 Cucumis melo HOM05D006076 ORTHO05D007506 7.0e-118 427.9 350 60.6
Cfa019426 Carpinus fangiana HOM05D006076 ORTHO05D007506 2.7e-117 426.0 318 64.2
SalBow5G0086 Salvia bowleyana HOM05D006076 ORTHO05D007506 3.5e-117 425.6 354 59.3
SalBow5G5467 Salvia bowleyana HOM05D006076 ORTHO05D007506 3.5e-117 425.6 354 59.3
ClCG05G010470 Citrullus lanatus HOM05D006076 ORTHO05D007506 7.8e-117 424.5 355 58.6
Gorai.007G188600 Gossypium raimondii HOM05D006076 ORTHO05D007506 1.3e-116 423.7 432 50.9
RcHm_v2.0_Chr2g0106631 Rosa chinensis HOM05D006076 ORTHO05D007506 1.1e-115 420.6 361 57.1
PSO782G3474 Papaver somniferum HOM05D006076 ORTHO05D007506 4.3e-115 418.7 369 56.4
Aqoxy3G04116 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 1.6e-114 416.8 370 56.5
EL10Ac4g08929 Beta vulgaris HOM05D006076 ORTHO05D007506 3.6e-114 415.6 350 56.9
CAN.G123.2 Capsicum annuum HOM05D006076 ORTHO05D007506 6.2e-114 414.8 340 58.8
CsaV3_3G018020 Cucumis sativus L. HOM05D006076 ORTHO05D007506 8.0e-114 414.5 353 59.2
PSO063G3081 Papaver somniferum HOM05D006076 ORTHO05D007506 3.1e-113 412.5 369 55.8
Lj4A252G57 Lonicera japonica HOM05D006076 ORTHO05D007506 1.5e-112 410.2 321 63.6
Oeu012318.2 Olea europaea HOM05D006076 ORTHO05D007506 1.5e-112 410.2 426 49.5
vmacro20467 Vaccinium macrocarpon HOM05D006076 ORTHO05D007506 3.7e-111 405.6 485 46.6
CDE04G2995 Ceratophyllum demersum HOM05D006076 ORTHO05D007506 6.0e-109 398.3 341 56.3
Duzib138G0191 Durio zibethinus HOM05D006076 ORTHO05D007506 1.3e-108 397.1 359 56.0
Solyc06g043140.4 Solanum lycopersicum HOM05D006076 ORTHO05D007506 5.6e-107 391.7 352 55.1
Atru.chr1.2153 Acer truncatum HOM05D006076 ORTHO05D007506 3.4e-104 382.5 247 70.4
ECA246G5189 Erigeron canadensis HOM05D006076 ORTHO05D000091 1.3e-103 380.6 315 59.0
Os02g0117800 Oryza sativa ssp. japonica HOM05D006076 ORTHO05D007506 1.3e-103 380.6 363 52.1
Zm00001eb230080 Zea mays HOM05D006076 ORTHO05D007506 1.3e-103 380.6 358 50.8
RcHm_v2.0_Chr5g0080521 Rosa chinensis HOM05D006076 ORTHO05D007506 1.1e-102 377.5 292 60.6
Gohir.A11G169800 Gossypium hirsutum HOM05D006076 ORTHO05D007506 1.2e-101 374.0 359 54.0
ATR0807G042 Amborella trichopoda HOM05D006076 ORTHO05D007506 2.3e-100 369.8 362 53.9
SEGI_25199 Sequoiadendron giganteum HOM05D006076 ORTHO05D007506 3.1e-97 359.4 384 47.1
Sed0003951 Sechium edule HOM05D006076 ORTHO05D007506 5.2e-97 358.6 358 54.2
Hund22204 Selenicereus undatus HOM05D006076 ORTHO05D007506 2.1e-93 346.7 348 50.6
Peaxi162Scf00294g00628 Petunia axillaris HOM05D006076 ORTHO05D007506 3.5e-93 345.9 354 51.7
Ah.05g177670 Amaranthus hybridus HOM05D006076 ORTHO05D007506 9.6e-91 337.8 319 53.6
Actinidia40417 Actinidia chinensis HOM05D006076 ORTHO05D007506 5.2e-89 332.0 246 64.6
Nn4g24719 Nelumbo nucifera HOM05D006076 ORTHO05D007506 2.1e-85 320.1 294 56.5
Prupe.1G579800 Prunus persica HOM05D006076 ORTHO05D007506 1.7e-84 317.0 209 70.3
Mapoly0019s0054 Marchantia polymorpha HOM05D006076 ORTHO05D007506 3.9e-84 315.8 421 39.7
AUR62037480 Chenopodium quinoa HOM05D006076 ORTHO05D007506 3.8e-79 299.3 208 65.4
AagrBONN_evm.TU.Sc2ySwM_344.1639 Anthoceros agrestis HOM05D006076 ORTHO05D007506 1.4e-78 297.4 411 38.2
MBI06_g30602_MAGBIO Magnolia biondii HOM05D006076 ORTHO05D007506 5.1e-76 288.9 285 51.2
Cpa.g.sc178.26 Carica papaya HOM05D006076 ORTHO05D007506 1.9e-75 287.0 158 79.7
SMO116G0154 Selaginella moellendorffii HOM05D006076 ORTHO05D007506 2.5e-75 286.6 340 41.8
Pp3c4_11110 Physcomitrium patens HOM05D006076 ORTHO05D007506 5.3e-73 278.9 378 39.2
BcaNung00408 Brassica carinata HOM05D006076 ORTHO05D007506 1.0e-68 264.6 186 76.3
Haze_08537 Corylus avellana HOM05D006076 ORTHO05D007506 8.2e-66 255.0 344 42.4
QL04p075308 Quercus lobata HOM05D006076 ORTHO05D007506 2.1e-61 240.4 133 78.2
TAR629G0059 Trochodendron aralioides HOM05D006076 ORTHO05D007506 1.9e-59 233.8 131 74.0
QL04p075158 Quercus lobata HOM05D006076 ORTHO05D007506 2.1e-58 230.3 226 53.1
HPP92_002577 Vanilla planifolia HOM05D006076 ORTHO05D007506 3.6e-53 213.0 255 45.1
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 3.6e-53 213.0 255 45.1
HanXRQChr16g0508921 Helianthus annuus HOM05D006076 ORTHO05D007506 3.0e-44 183.3 181 53.0
HanXRQChr02g0046461 Helianthus annuus HOM05D006076 ORTHO05D007506 6.7e-44 182.2 182 52.2
Cpa.g.sc178.27 Carica papaya HOM05D006076 ORTHO05D007506 1.4e-36 157.9 152 53.9
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 2.3e-36 157.1 93 75.3
CBR_g50474 Chara braunii HOM05D001161 ORTHO05D000497 3.9e-36 156.4 123 52.0
QL04p075322 Quercus lobata HOM05D006076 ORTHO05D007506 5.7e-27 125.9 76 72.4
Aqoxy531s001 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 1.2e-21 108.2 129 45.7
Cre14.g630907 Chlamydomonas reinhardtii HOM05D006076 ORTHO05D007506 8.8e-20 102.1 191 34.6
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 3.4e-19 100.1 90 52.2
AUR62037479 Chenopodium quinoa HOM05D006076 ORTHO05D007506 1.8e-17 94.4 118 43.2
Actinidia40416 Actinidia chinensis HOM05D006076 ORTHO05D007506 2.7e-08 63.9 102 37.3


User provided reference genes

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