Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G14165 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 9.7e-163 576.6 269 100.0
BcaC01g04751 Brassica carinata HOM05D001487 ORTHO05D001365 1.1e-54 217.6 196 58.2
BolC3t15728H Brassica oleracea HOM05D001487 ORTHO05D001365 2.6e-54 216.5 196 57.7
C03p34190 Brassica napus HOM05D001487 ORTHO05D001365 4.4e-54 215.7 194 57.2
BraA03t12034Z Brassica rapa HOM05D001487 ORTHO05D001365 4.1e-52 209.1 196 55.6
BcaB01g02842 Brassica carinata HOM05D001487 ORTHO05D001365 1.2e-51 207.6 184 60.9
AL1G60840 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.3e-50 204.1 216 55.6
AL7G30780 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 5.5e-49 198.7 187 58.3
Carub.0007s1850 Capsella rubella HOM05D001487 ORTHO05D001365 1.0e-47 194.5 194 54.1
Carub.0001s4156 Capsella rubella HOM05D001487 ORTHO05D001365 3.0e-47 193.0 204 56.4
Thhalv10025429m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.0e-47 193.0 201 53.7
Thhalv10026778m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.5e-46 190.7 144 66.0
AL7G31500 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.0e-46 190.3 190 55.8
Thhalv10027492m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 2.6e-46 189.9 201 53.2
CARHR229730 Cardamine hirsuta HOM05D001487 ORTHO05D001365 9.7e-46 188.0 205 51.7
AT4G22170 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 8.2e-45 184.9 191 56.0
Carub.0007s1915 Capsella rubella HOM05D001487 ORTHO05D001365 4.5e-43 179.1 197 50.3
A01p13530 Brassica napus HOM05D001487 ORTHO05D001365 2.5e-41 173.3 198 49.0
Thhalv10009751m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.2e-41 172.9 197 51.8
BraA01t01294Z Brassica rapa HOM05D001487 ORTHO05D001365 4.2e-41 172.6 198 48.5
CARHR229040 Cardamine hirsuta HOM05D001487 ORTHO05D001365 5.5e-41 172.2 196 48.0
Carub.0007s1913 Capsella rubella HOM05D001487 ORTHO05D001365 1.2e-40 171.0 194 49.0
CARHR229030 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.1e-40 170.2 191 48.7
A01p13550 Brassica napus HOM05D001487 ORTHO05D001365 4.7e-40 169.1 193 49.7
BcaNung03757 Brassica carinata HOM05D001487 ORTHO05D001365 5.2e-39 165.6 196 48.0
BraA01t01297Z Brassica rapa HOM05D001487 ORTHO05D001365 5.2e-39 165.6 193 49.2
Carub.0007s1914 Capsella rubella HOM05D001487 ORTHO05D001365 1.2e-38 164.5 199 48.7
C01p16390 Brassica napus HOM05D001487 ORTHO05D001365 1.5e-38 164.1 156 55.1
A02p04530 Brassica napus HOM05D001487 ORTHO05D001365 2.6e-38 163.3 197 49.2
AT4G22165 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.7e-38 162.2 195 47.2
BraA02t05414Z Brassica rapa HOM05D001487 ORTHO05D001365 5.7e-38 162.2 197 48.2
CARHR283650 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.2e-37 160.2 165 58.2
AL7G31490 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.1e-36 157.9 194 46.9
AT4G22660 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.8e-36 157.1 199 46.2
AT4G22180 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 3.1e-36 156.4 199 45.2
Thhalv10013780m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 2.7e-35 153.3 186 49.5
BraA03t14399Z Brassica rapa HOM05D001487 ORTHO05D001365 4.5e-35 152.5 198 46.0
BolC1t01589H Brassica oleracea HOM05D001487 ORTHO05D001365 7.7e-35 151.8 173 49.1
BcaNung00808 Brassica carinata HOM05D001487 ORTHO05D001365 1.0e-34 151.4 210 43.8
AL7G31480 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.7e-34 150.6 200 47.0
BraA06t27782Z Brassica rapa HOM05D001487 ORTHO05D001365 1.7e-34 150.6 204 45.6
A03p53350 Brassica napus HOM05D001487 ORTHO05D001365 2.3e-34 150.2 198 44.9
C07p41400 Brassica napus HOM05D001487 ORTHO05D001365 5.0e-34 149.1 206 46.1
AL7G31520 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.1e-33 147.9 185 47.0
BcaC09g51154 Brassica carinata HOM05D001487 ORTHO05D001365 1.1e-33 147.9 204 44.1
BcaB05g25248 Brassica carinata HOM05D001487 ORTHO05D001365 1.5e-33 147.5 210 43.8
CARHR229020 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.9e-33 147.1 168 47.6
Carub.0007s3493 Capsella rubella HOM05D001487 ORTHO05D001365 2.6e-30 136.7 209 43.5
AL7G31470 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.2e-29 133.7 176 44.9
BcaC04g19949 Brassica carinata HOM05D001487 ORTHO05D001365 1.3e-26 124.4 209 39.2
BcaB05g23284 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-26 124.0 152 48.0
CARHR061980 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.6e-26 122.1 202 40.1
BcaNung00809 Brassica carinata HOM05D001487 ORTHO05D001365 4.3e-25 119.4 171 42.1
AT4G22060 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 7.3e-25 118.6 204 38.7
A03p05530 Brassica napus HOM05D001487 ORTHO05D001365 9.5e-25 118.2 210 37.6
BcaC03g13551 Brassica carinata HOM05D001487 ORTHO05D001365 2.1e-24 117.1 197 40.1
BcaB01g05410 Brassica carinata HOM05D001487 ORTHO05D001365 3.6e-24 116.3 205 39.0
CARHR229070 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.7e-24 115.9 177 42.9
CARHR072250 Cardamine hirsuta HOM05D001487 ORTHO05D001365 8.0e-24 115.2 205 37.1
BcaB01g05409 Brassica carinata HOM05D001487 ORTHO05D001365 1.0e-23 114.8 205 38.5
BolC9t52936H Brassica oleracea HOM05D001487 ORTHO05D001365 1.0e-23 114.8 185 41.6
Carub.0007s1930 Capsella rubella HOM05D001487 ORTHO05D001365 1.0e-23 114.8 186 37.6
BraA03t09892Z Brassica rapa HOM05D001487 ORTHO05D001365 1.8e-23 114.0 210 36.7
BcaB01g05408 Brassica carinata HOM05D001487 ORTHO05D001365 2.3e-23 113.6 205 38.0
BraA03t14387Z Brassica rapa HOM05D001487 ORTHO05D001365 2.3e-23 113.6 205 40.0
C07p51640 Brassica napus HOM05D001487 ORTHO05D001365 4.0e-23 112.8 176 40.3
C03p06480 Brassica napus HOM05D001487 ORTHO05D001365 6.8e-23 112.1 210 36.2
C03p06520 Brassica napus HOM05D001487 ORTHO05D001365 6.8e-23 112.1 210 36.2
Thhalv10028141m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.5e-22 110.9 211 36.0
A03p53240 Brassica napus HOM05D001487 ORTHO05D001365 2.0e-22 110.5 206 35.9
BcaNung01709 Brassica carinata HOM05D001487 ORTHO05D001365 2.6e-22 110.2 204 36.8
A03p28270 Brassica napus HOM05D001487 ORTHO05D001365 2.6e-22 110.2 98 57.1
BolC3t13152H Brassica oleracea HOM05D001487 ORTHO05D001365 2.6e-22 110.2 210 35.7
BcaB01g05407 Brassica carinata HOM05D001487 ORTHO05D001365 3.4e-22 109.8 205 37.6
BcaNung00818 Brassica carinata HOM05D001487 ORTHO05D001365 5.7e-22 109.0 192 38.5
C08p52970 Brassica napus HOM05D001487 ORTHO05D001365 9.8e-22 108.2 209 37.8
Carub.0008s0080 Capsella rubella HOM05D001487 ORTHO05D001365 1.3e-21 107.8 196 36.7
AT5G66830 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.9e-21 106.7 209 35.9
BraA03t09894Z Brassica rapa HOM05D001487 ORTHO05D001365 3.7e-21 106.3 212 35.4
A09p68400 Brassica napus HOM05D001487 ORTHO05D001365 6.4e-21 105.5 204 37.7
BraA09t42176Z Brassica rapa HOM05D001487 ORTHO05D001365 6.4e-21 105.5 204 37.7
BcaNung01710 Brassica carinata HOM05D001487 ORTHO05D001365 1.1e-20 104.8 189 38.6
C07p51560 Brassica napus HOM05D001487 ORTHO05D001365 1.1e-20 104.8 206 35.4
Carub.0004s0068 Capsella rubella HOM05D001487 ORTHO05D001365 1.1e-20 104.8 208 37.0
BolC8t52813H Brassica oleracea HOM05D001487 ORTHO05D001365 1.8e-20 104.0 209 37.3
AT1G69090 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 7.0e-20 102.1 211 33.6
CARHR229010 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.6e-19 100.9 182 41.2
Carub.0007s2121 Capsella rubella HOM05D001487 ORTHO05D001365 2.0e-19 100.5 210 31.4
Carub.0007s3024 Capsella rubella HOM05D001487 ORTHO05D001365 2.0e-19 100.5 204 35.8
BcaC01g00756 Brassica carinata HOM05D001487 ORTHO05D001365 2.7e-19 100.1 204 34.8
A03p05550 Brassica napus HOM05D001487 ORTHO05D001365 2.7e-19 100.1 209 34.0
A03p53270 Brassica napus HOM05D001487 ORTHO05D001365 2.7e-19 100.1 174 37.9
C08p53010 Brassica napus HOM05D001487 ORTHO05D001365 2.7e-19 100.1 209 36.8
BolC3t13163H Brassica oleracea HOM05D001487 ORTHO05D001365 2.7e-19 100.1 211 34.6
Carub.0007s1928 Capsella rubella HOM05D001487 ORTHO05D001365 2.7e-19 100.1 203 31.5
BolC1t01588H Brassica oleracea HOM05D001487 ORTHO05D001365 3.5e-19 99.8 103 53.4
CARHR062010 Cardamine hirsuta HOM05D001487 ORTHO05D001365 5.9e-19 99.0 233 35.2
CARHR229110 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.0e-18 98.2 103 54.4
A01p24100 Brassica napus HOM05D001487 ORTHO05D001365 1.3e-18 97.8 209 34.0
BraA01t02323Z Brassica rapa HOM05D001487 ORTHO05D001365 1.3e-18 97.8 209 34.0
A08p15560 Brassica napus HOM05D001487 ORTHO05D001365 1.7e-18 97.4 203 34.5
BraA08t33536Z Brassica rapa HOM05D001487 ORTHO05D001365 1.7e-18 97.4 203 34.5
CARHR229050 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.3e-18 97.1 103 49.5
BraA03t14390Z Brassica rapa HOM05D001487 ORTHO05D001365 9.5e-17 91.7 184 35.3
Thhalv10026894m.g Eutrema salsugineum HOM05D001110 ORTHO05D000942 1.4e-15 87.8 187 35.8
AT5G14160 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 3.1e-15 86.7 181 34.3
BcaNung00814 Brassica carinata HOM05D001487 ORTHO05D001365 2.6e-14 83.6 182 33.5
Thhalv10015550m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 5.8e-14 82.4 202 34.2
A03p53200 Brassica napus HOM05D001487 ORTHO05D001365 1.3e-13 81.3 123 40.7
C07p51570 Brassica napus HOM05D001487 ORTHO05D001365 1.7e-13 80.9 182 34.1
BcaNung00815 Brassica carinata HOM05D001487 ORTHO05D001365 2.2e-13 80.5 179 33.0
AL3G11210 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.9e-13 80.1 205 33.2
BcaB02g09869 Brassica carinata HOM05D001487 ORTHO05D001365 8.3e-13 78.6 194 32.0
Carub.0003s0112 Capsella rubella HOM05D001487 ORTHO05D001365 1.1e-12 78.2 205 29.8
BolC7t46800H Brassica oleracea HOM05D001487 ORTHO05D001365 3.2e-12 76.6 101 45.5
Carub.0002s2025 Capsella rubella HOM05D001487 ORTHO05D001365 4.1e-12 76.3 222 29.7
BcaC09g47807 Brassica carinata HOM05D001487 ORTHO05D001365 7.0e-12 75.5 209 31.1
AT4G17565 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.2e-11 74.7 201 28.4
BolC7t44671H Brassica oleracea HOM05D001487 ORTHO05D001365 1.6e-11 74.3 86 48.8
BraA01t00906Z Brassica rapa HOM05D001487 ORTHO05D001365 3.5e-11 73.2 206 31.1
Carub.0001s3411 Capsella rubella HOM05D001487 ORTHO05D001365 3.5e-11 73.2 173 32.9
BNapus_Darmor_BZH_scaffold_146p00010 Brassica napus HOM05D001487 ORTHO05D001365 4.6e-11 72.8 74 54.1
Sp3g24140 Schrenkiella parvula HOM05D001487 ORTHO05D001365 7.8e-11 72.0 215 30.2
AL919U10020 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.0e-10 71.6 203 28.6
A02p29050 Brassica napus HOM05D001487 ORTHO05D001365 1.0e-10 71.6 233 30.9
CARHR076060 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.3e-10 71.2 222 29.3
C03p06460 Brassica napus HOM05D001487 ORTHO05D001365 1.7e-10 70.9 129 37.2
Thhalv10027445m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.7e-10 70.9 203 28.1
BcaB05g22373 Brassica carinata HOM05D001487 ORTHO05D001365 3.9e-10 69.7 195 29.7
BcaB01g04511 Brassica carinata HOM05D001487 ORTHO05D001365 6.6e-10 68.9 212 31.1
BcaB01g04516 Brassica carinata HOM05D001487 ORTHO05D001365 6.6e-10 68.9 212 31.1
A09p39270 Brassica napus HOM05D001487 ORTHO05D001365 8.6e-10 68.6 229 30.1
CARHR228860 Cardamine hirsuta HOM05D001487 ORTHO05D001365 8.6e-10 68.6 114 39.5
BcaC09g47801 Brassica carinata HOM05D001487 ORTHO05D001365 1.1e-09 68.2 231 29.4
BolC1t05751H Brassica oleracea HOM05D001487 ORTHO05D001365 1.1e-09 68.2 231 29.4
BolC3t13870H Brassica oleracea HOM05D001487 ORTHO05D001365 1.1e-09 68.2 220 29.5
AL3G13540 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.5e-09 67.8 203 28.6
AL7G37040 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.9e-09 67.4 198 28.3
AT2G05970 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 4.3e-09 66.2 119 35.3
BcaC01g06628 Brassica carinata HOM05D001487 ORTHO05D001365 4.3e-09 66.2 221 29.9
BcaC01g06632 Brassica carinata HOM05D001487 ORTHO05D001365 4.3e-09 66.2 210 31.0
BcaNung01706 Brassica carinata HOM05D001487 ORTHO05D001365 4.3e-09 66.2 116 37.9
C01p16380 Brassica napus HOM05D001487 ORTHO05D001365 4.3e-09 66.2 48 64.6
A03p12160 Brassica napus HOM05D001487 ORTHO05D001365 7.3e-09 65.5 179 30.7
BcaC03g18566 Brassica carinata HOM05D001487 ORTHO05D001365 9.5e-09 65.1 185 30.8
C02p13880 Brassica napus HOM05D001487 ORTHO05D001365 9.5e-09 65.1 185 30.8
BolC2t07507H Brassica oleracea HOM05D001487 ORTHO05D001365 9.5e-09 65.1 185 30.8
CARHR052960 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.1e-08 63.9 75 46.7
BolC3t13871H Brassica oleracea HOM05D001487 ORTHO05D001365 3.6e-08 63.2 179 30.7
BraA03t14395Z Brassica rapa HOM05D001487 ORTHO05D001365 3.6e-08 63.2 76 47.4
CARHR229570 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.2e-08 62.4 125 36.0
A01p09640 Brassica napus HOM05D001487 ORTHO05D001365 8.1e-08 62.0 181 29.8
BraA03t14393Z Brassica rapa HOM05D001487 ORTHO05D001365 1.1e-07 61.6 117 34.2
BcaB02g09867 Brassica carinata HOM05D027275 ORTHO05D001365 1.8e-07 60.8 178 30.9
BcaNung01712 Brassica carinata HOM05D001487 ORTHO05D001365 2.3e-07 60.5 113 35.4
Carub.0003s2251 Capsella rubella HOM05D001487 ORTHO05D001365 3.1e-07 60.1 183 29.5
BcaB01g04515 Brassica carinata HOM05D001487 ORTHO05D001365 4.0e-07 59.7 72 44.4
Thhalv10022303m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 5.2e-07 59.3 199 28.6
BcaC09g51630 Brassica carinata HOM05D001487 ORTHO05D001365 8.9e-07 58.5 199 30.2
Aa31LG7G13440 Aethionema arabicum HOM05D001487 ORTHO05D001365 1.2e-06 58.2 186 28.5
BcaB02g09872 Brassica carinata HOM05D001487 ORTHO05D001365 1.5e-06 57.8 149 30.9
Carub.0005s0756 Capsella rubella HOM05D001487 ORTHO05D001365 2.0e-06 57.4 231 23.4
AL1G20800 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 5.8e-06 55.8 217 24.4
BcaC01g06627 Brassica carinata HOM05D001487 ORTHO05D001365 5.8e-06 55.8 184 29.9


User provided reference genes

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