Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 4.0e-301 1037.3 528 100.0
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 3.4e-284 981.1 528 94.5
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 5.0e-280 967.2 528 92.8
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 1.4e-261 906.0 530 87.9
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 1.3e-259 899.4 529 86.2
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 8.3e-259 896.7 529 85.8
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 9.2e-258 893.3 529 85.4
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 3.5e-257 891.3 529 85.3
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 2.5e-255 885.2 532 86.7
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 1.2e-254 882.9 529 85.1
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 5.2e-253 877.5 534 85.6
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 1.8e-229 799.3 536 78.4
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 3.4e-220 768.5 538 74.3
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 1.7e-206 723.0 427 86.9
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 8.0e-193 677.6 534 67.8
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 2.6e-191 672.5 556 66.5
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.1e-189 667.2 563 65.5
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.4e-189 666.8 545 65.5
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 9.1e-189 664.1 552 65.8
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 1.6e-188 663.3 516 67.4
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 2.0e-188 662.9 519 67.6
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 3.5e-188 662.1 545 65.0
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 5.9e-188 661.4 560 64.3
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 1.3e-187 660.2 479 71.2
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 1.7e-187 659.8 479 71.2
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 2.2e-187 659.4 479 71.2
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.8e-187 658.7 520 67.1
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 5.0e-187 658.3 461 73.1
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 1.1e-186 657.1 499 68.5
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 2.5e-186 656.0 527 65.7
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 4.7e-185 651.7 464 72.8
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 6.1e-185 651.4 533 64.2
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 8.0e-185 651.0 547 65.4
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 1.8e-184 649.8 542 64.8
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 4.0e-184 648.7 504 67.1
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 6.7e-184 647.9 542 64.9
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 3.3e-183 645.6 565 62.5
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.3e-182 643.7 501 68.1
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 1.7e-182 643.3 487 69.2
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 1.7e-182 643.3 544 64.5
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.2e-182 642.9 519 66.1
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 3.7e-182 642.1 543 63.9
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 4.8e-182 641.7 484 67.6
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 1.8e-181 639.8 480 69.0
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 3.1e-181 639.0 481 69.9
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 9.1e-181 637.5 505 66.3
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 9.1e-181 637.5 535 64.9
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 2.0e-180 636.3 542 64.9
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 5.9e-180 634.8 484 68.8
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 1.3e-179 633.6 535 64.5
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 2.9e-179 632.5 471 69.2
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 2.9e-179 632.5 499 66.7
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 3.8e-179 632.1 600 60.0
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 6.5e-179 631.3 481 67.8
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 8.5e-179 630.9 485 66.4
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 8.5e-179 630.9 463 70.4
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 8.5e-179 630.9 543 63.4
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 1.9e-178 629.8 505 65.3
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 4.2e-178 628.6 495 66.7
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 7.2e-178 627.9 446 71.7
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 1.2e-177 627.1 545 62.8
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 3.6e-177 625.5 440 73.6
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 3.6e-177 625.5 502 66.3
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 6.1e-177 624.8 486 66.7
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.0e-176 624.0 498 67.1
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 2.2e-174 616.3 539 63.3
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 2.4e-173 612.8 505 64.6
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 4.1e-173 612.1 487 66.5
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 9.1e-173 610.9 499 64.3
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 2.0e-172 609.8 541 61.7
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 3.5e-172 609.0 487 65.1
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 3.5e-172 609.0 540 61.5
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 5.9e-172 608.2 483 66.0
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.3e-171 607.1 480 65.6
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 1.3e-171 607.1 510 63.7
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.3e-171 606.3 483 66.3
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 2.9e-171 605.9 501 65.5
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 2.8e-169 599.4 546 60.6
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 6.1e-169 598.2 507 63.3
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 8.0e-169 597.8 470 67.2
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.5e-167 593.6 489 63.4
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 1.5e-167 593.6 508 63.2
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.6e-167 592.8 523 62.1
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 2.6e-167 592.8 534 59.9
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 1.3e-166 590.5 483 65.0
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 8.3e-166 587.8 462 68.0
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 8.6e-163 577.8 501 62.5
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 1.4e-160 570.5 511 60.7
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 9.2e-157 557.8 487 62.8
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 1.7e-150 537.0 471 62.0
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 6.4e-150 535.0 482 59.8
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.4e-149 533.9 402 67.7
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 6.2e-145 518.5 430 62.8
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 2.8e-137 493.0 568 52.5
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 8.7e-131 471.5 512 52.5
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 9.4e-93 345.1 318 57.2
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 4.3e-90 336.3 279 65.9
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.4e-83 314.7 435 45.1
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 3.8e-78 296.6 160 85.0
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.0e-75 288.5 230 67.0
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 1.4e-75 288.1 267 58.4
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 4.8e-73 279.6 490 38.2
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 9.4e-69 265.4 251 57.0
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 1.7e-65 254.6 277 56.0
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 2.5e-61 240.7 198 66.2
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 2.5e-61 240.7 552 31.9
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.2e-60 238.4 424 37.7
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 4.5e-55 219.9 121 81.0
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 6.6e-54 216.1 121 82.6
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.5e-53 213.0 147 72.1
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 1.3e-49 201.8 141 69.5
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.2e-49 201.1 264 46.6
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 1.4e-43 181.8 165 57.0
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 9.8e-42 175.6 284 38.0
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 1.1e-32 145.6 80 81.2
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 4.3e-29 133.7 104 68.3
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 1.7e-25 121.7 219 39.3
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 1.9e-21 108.2 102 57.8
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 6.8e-19 99.8 81 64.2
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 1.1e-16 92.4 69 62.3
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 3.2e-16 90.9 102 53.9
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 1.2e-15 89.0 111 48.6
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 1.6e-15 88.6 138 47.1
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 1.7e-14 85.1 53 69.8
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 4.3e-13 80.5 55 63.6
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.1e-12 78.2 76 59.2
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 2.0e-10 71.6 76 56.6
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 1.4e-08 65.5 47 57.4
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 7.1e-08 63.2 32 93.8


User provided reference genes

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