Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 0.0e+00 1469.5 754 100.0
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 0.0e+00 1409.8 754 95.4
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 0.0e+00 1319.3 732 91.9
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 0.0e+00 1275.8 754 87.4
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 0.0e+00 1255.4 759 86.0
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 0.0e+00 1247.3 732 87.2
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 0.0e+00 1198.3 759 82.2
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 0.0e+00 1161.7 733 82.3
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 0.0e+00 1158.7 736 82.1
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 0.0e+00 1156.7 735 81.8
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 0.0e+00 1155.2 736 81.9
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 0.0e+00 1136.3 737 80.6
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 0.0e+00 1125.2 732 80.1
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 3.4e-290 1001.5 763 70.6
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 3.0e-238 828.9 761 58.9
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 3.7e-236 822.0 656 64.3
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 4.4e-229 798.5 733 57.8
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 3.7e-228 795.4 733 57.6
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 3.7e-228 795.4 791 56.6
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 6.4e-228 794.7 705 60.7
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.4e-227 793.5 650 62.9
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 1.4e-227 793.5 705 60.6
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 7.0e-227 791.2 768 56.1
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 1.6e-226 790.0 774 55.7
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 5.1e-225 785.0 712 59.8
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 6.8e-222 774.6 735 57.6
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 5.8e-221 771.5 754 54.9
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.7e-220 770.0 691 58.0
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 1.7e-220 770.0 732 55.7
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 6.0e-218 761.5 656 59.9
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 1.9e-216 756.5 724 55.2
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.6e-215 752.3 649 59.2
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 4.7e-215 751.9 760 53.0
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 4.9e-212 741.9 661 58.5
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 6.4e-212 741.5 694 57.1
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 8.4e-212 741.1 769 53.4
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 7.8e-210 734.6 757 52.7
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 3.9e-209 732.3 710 54.8
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 1.5e-208 730.3 744 52.2
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.4e-206 723.8 759 52.0
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 5.3e-206 721.8 710 54.9
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 6.9e-206 721.5 741 52.6
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 9.0e-206 721.1 691 55.1
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 1.2e-205 720.7 755 53.2
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 5.8e-205 718.4 893 47.8
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 8.4e-204 714.5 706 53.8
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 2.3e-201 706.4 716 53.2
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.1e-200 704.1 754 50.9
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 1.9e-200 703.4 754 53.8
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 8.1e-199 698.0 732 53.3
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 5.3e-198 695.3 726 52.2
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 9.0e-198 694.5 746 50.7
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 2.6e-197 693.0 739 52.8
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 5.8e-197 691.8 773 48.9
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.3e-196 690.6 693 54.0
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 2.2e-196 689.9 782 50.3
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.1e-195 687.6 752 49.6
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.1e-195 687.6 719 51.7
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.6e-194 683.7 609 56.2
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.1e-194 683.3 746 50.0
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.8e-193 680.2 746 50.0
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 1.8e-193 680.2 759 52.0
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 6.7e-193 678.3 633 55.1
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 1.5e-192 677.2 605 57.7
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 1.9e-192 676.8 747 50.9
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 2.5e-192 676.4 704 52.3
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 7.4e-192 674.9 713 51.8
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 4.8e-191 672.2 750 50.0
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.4e-190 669.8 693 51.9
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 6.9e-190 668.3 737 51.0
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 1.2e-189 667.5 727 50.6
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 2.0e-189 666.8 685 53.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.6e-189 666.4 700 51.1
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 1.3e-188 664.1 775 49.2
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 2.2e-188 663.3 732 48.8
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 3.8e-188 662.5 736 50.0
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 7.1e-187 658.3 737 49.7
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 3.9e-185 652.5 1048 39.4
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.1e-184 651.0 636 53.3
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 1.5e-184 650.6 726 49.4
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 4.3e-184 649.0 737 49.3
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 1.1e-182 644.4 702 50.7
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 5.8e-181 638.6 698 50.3
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 2.2e-180 636.7 695 50.5
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 4.2e-179 632.5 686 51.0
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 4.6e-178 629.0 650 50.3
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.1e-176 624.4 724 48.9
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 1.1e-176 624.4 725 48.8
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.5e-176 624.0 738 47.6
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 2.5e-176 623.2 559 56.9
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 6.5e-172 608.6 738 47.0
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 3.2e-163 579.7 652 47.7
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 4.7e-162 575.9 577 51.6
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 1.8e-158 563.9 638 48.7
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 3.3e-152 543.1 649 47.0
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 1.8e-145 520.8 719 42.8
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 3.7e-143 513.1 686 44.9
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 7.2e-139 498.8 472 54.2
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.1e-122 444.1 666 41.6
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 5.2e-113 412.9 761 37.5
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.5e-104 384.8 404 53.2
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 1.5e-99 368.2 299 62.5
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 8.1e-98 362.5 574 36.1
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 2.0e-96 357.8 580 37.2
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 9.9e-96 355.5 397 48.1
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 4.9e-95 353.2 676 35.1
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 7.9e-85 319.3 259 64.1
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 3.1e-81 307.4 572 33.6
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 1.3e-74 285.4 606 33.5
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.6e-69 268.5 397 41.3
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 7.9e-69 266.2 686 31.8
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 7.9e-53 213.0 282 45.7
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 1.1e-49 202.6 606 27.7
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 1.4e-46 192.2 634 25.2
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 5.7e-35 153.7 795 23.8
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 1.3e-31 142.5 663 25.8
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 5.2e-28 130.6 175 45.7
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 8.8e-28 129.8 484 25.6
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.8e-26 124.8 243 34.6
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 9.1e-25 119.8 92 70.7
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 3.5e-24 117.9 75 81.3
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.5e-22 112.5 145 45.5
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.5e-22 111.7 154 45.5
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 4.2e-22 110.9 162 39.5
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 3.8e-15 87.8 121 43.8
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 7.3e-14 83.6 551 21.8
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 4.1e-09 67.8 72 44.4
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 3.9e-07 61.2 155 32.9
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 5.0e-07 60.8 67 44.8
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 5.0e-07 60.8 54 50.0


User provided reference genes

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