Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 2.6e-172 608.6 302 100.0
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.3e-168 596.3 302 97.0
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 3.9e-160 568.2 302 92.1
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 5.3e-157 557.8 302 91.7
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 2.3e-152 542.3 302 88.7
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 4.3e-151 538.1 302 88.4
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.1e-149 533.5 304 88.5
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 9.0e-149 530.4 303 86.8
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 1.2e-148 530.0 302 86.8
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 2.0e-148 529.3 302 86.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 5.8e-148 527.7 302 86.4
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.7e-147 526.2 302 87.4
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 2.2e-147 525.8 302 86.4
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 6.4e-147 524.2 305 85.2
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 2.4e-146 522.3 304 85.9
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 3.9e-144 515.0 302 86.8
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 9.6e-143 510.4 297 85.5
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 2.1e-142 509.2 296 85.5
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 2.1e-142 509.2 299 84.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.1e-141 505.4 296 85.1
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 6.9e-133 477.6 302 80.5
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.3e-128 463.4 302 77.5
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 1.8e-128 463.0 302 77.8
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 3.9e-128 461.8 303 76.2
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.2e-126 456.1 302 76.8
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 4.8e-126 454.9 299 75.9
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.1e-125 453.8 303 75.2
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 1.2e-124 450.3 303 74.9
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 4.5e-124 448.4 302 75.5
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.0e-123 447.2 302 75.8
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 2.2e-123 446.0 304 74.0
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 3.2e-122 442.2 304 74.3
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 4.6e-121 438.3 302 73.8
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 6.1e-121 438.0 302 72.2
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 1.0e-120 437.2 296 75.0
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.8e-120 436.4 303 72.9
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 8.8e-120 434.1 305 73.1
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 7.4e-119 431.0 302 72.5
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 1.3e-118 430.3 298 72.5
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 1.3e-118 430.3 302 71.9
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 3.7e-118 428.7 309 71.2
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 1.4e-117 426.8 298 70.1
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 6.9e-117 424.5 305 71.5
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 6.9e-117 424.5 299 69.9
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 9.1e-117 424.1 302 70.5
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 4.5e-116 421.8 305 71.1
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 2.2e-115 419.5 294 70.7
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 5.0e-115 418.3 304 71.7
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 8.5e-115 417.5 299 68.6
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.4e-114 416.8 293 69.3
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.9e-114 416.4 277 74.0
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 2.5e-114 416.0 301 71.1
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 3.2e-114 415.6 299 68.2
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 4.2e-114 415.2 300 71.7
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 5.5e-114 414.8 305 70.2
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 9.4e-114 414.1 298 68.8
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.2e-113 413.7 306 70.6
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 1.2e-113 413.7 301 70.4
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 4.7e-113 411.8 298 67.4
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 6.1e-113 411.4 336 64.3
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 7.9e-113 411.0 306 69.6
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 1.0e-112 410.6 262 80.5
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 3.9e-112 408.7 292 69.5
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 5.1e-112 408.3 292 69.5
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 6.7e-112 407.9 305 69.2
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.5e-111 406.8 299 69.9
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.3e-110 403.7 303 67.7
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 2.2e-110 402.9 299 69.2
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 4.8e-110 401.7 304 69.1
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 4.8e-110 401.7 314 66.2
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.1e-109 400.6 268 74.3
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.4e-109 400.2 319 66.1
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.4e-109 400.2 322 65.5
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.8e-109 399.8 301 67.8
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.1e-109 399.1 283 71.0
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 5.3e-109 398.3 296 68.2
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.2e-108 397.1 319 65.5
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 1.5e-108 396.7 283 71.4
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 2.5e-106 389.4 302 68.2
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 3.6e-105 385.6 287 69.0
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.5e-103 380.2 300 66.3
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 3.1e-101 372.5 293 62.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 2.6e-100 369.4 310 61.3
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 7.2e-98 361.3 278 63.7
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 7.2e-98 361.3 222 81.5
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 3.6e-97 359.0 245 73.1
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 8.0e-97 357.8 329 61.7
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 1.5e-95 353.6 300 59.7
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 3.7e-94 349.0 214 79.9
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.1e-93 347.4 249 70.3
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 1.6e-92 343.6 308 60.7
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 2.0e-92 343.2 245 72.7
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 5.0e-91 338.6 247 70.0
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 3.2e-90 335.9 305 61.3
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 2.8e-86 322.8 308 53.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 9.1e-85 317.8 212 74.5
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 8.6e-83 311.2 299 52.2
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.9e-82 310.1 247 66.0
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.2e-79 300.8 275 59.6
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 8.6e-75 284.6 220 67.7
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 5.6e-74 282.0 249 60.2
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.9e-69 266.9 324 45.7
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 2.0e-68 263.5 218 65.1
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 2.7e-68 263.1 291 51.5
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 4.6e-68 262.3 242 61.2
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.0e-68 261.9 385 44.4
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 7.3e-66 255.0 149 77.9
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 4.1e-61 239.2 254 52.4
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 4.1e-61 239.2 224 60.3
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.5e-58 230.7 184 62.5
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 2.1e-57 226.9 182 67.0
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.0e-55 220.3 236 54.7
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 9.9e-55 218.0 179 63.7
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.1e-53 214.5 211 58.8
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 2.5e-50 203.4 165 63.6
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 7.6e-47 191.8 111 75.7
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 1.3e-46 191.0 125 71.2
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 8.4e-46 188.3 135 68.9
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.5e-39 167.5 95 82.1
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 3.8e-38 162.9 280 37.5
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 7.9e-36 155.2 96 74.0
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 8.1e-33 145.2 86 77.9
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 6.9e-32 142.1 126 62.7
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 4.2e-29 132.9 336 29.5
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.7e-28 130.2 153 49.0
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 3.9e-27 126.3 249 33.7
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 1.5e-26 124.4 70 82.9
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 8.1e-25 118.6 161 43.5
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 3.1e-24 116.7 133 42.9
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.3e-18 96.3 96 58.3
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 9.6e-18 95.1 109 53.2
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.1e-12 75.9 92 53.3
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 6.7e-11 72.4 31 90.3
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.9e-10 70.9 89 52.8
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 8.2e-09 65.5 81 46.9


User provided reference genes

Program Settings