Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL879U10010 Arabidopsis lyrata HOM05D003924 ORTHO05D000708 7.9e-46 186.8 98 100.0
AL4G36570 Arabidopsis lyrata HOM05D003924 ORTHO05D005216 4.8e-43 177.6 94 100.0
CARHR134000 Cardamine hirsuta HOM05D003924 ORTHO05D005216 4.7e-22 107.8 59 94.9
AT2G39260 Arabidopsis thaliana HOM05D003924 ORTHO05D005216 8.0e-22 107.1 59 93.2
Carub.0004s2131 Capsella rubella HOM05D003924 ORTHO05D005216 1.4e-21 106.3 59 94.9
BcaB01g03658 Brassica carinata HOM05D003924 ORTHO05D005216 1.8e-21 105.9 59 93.2
C03p26070 Brassica napus HOM05D003924 ORTHO05D005216 1.8e-21 105.9 59 93.2
BolC3t14991H Brassica oleracea HOM05D003924 ORTHO05D005216 1.8e-21 105.9 59 93.2
BcaB01g03607 Brassica carinata HOM05D003924 ORTHO05D005216 2.3e-21 105.5 58 94.8
Sp4g21570 Schrenkiella parvula HOM05D003924 ORTHO05D005216 4.0e-21 104.8 59 91.5
SpUn0018_0100 Schrenkiella parvula HOM05D003924 ORTHO05D005216 4.0e-21 104.8 59 91.5
A03p21980 Brassica napus HOM05D003924 ORTHO05D005216 6.7e-21 104.0 59 91.5
BraA03t11433Z Brassica rapa HOM05D003924 ORTHO05D005216 6.7e-21 104.0 59 91.5
VMungo1309G1679 Vigna mungo HOM05D003924 ORTHO05D005216 6.7e-21 104.0 59 91.5
Aa31LG5G20240 Aethionema arabicum HOM05D003924 ORTHO05D005216 8.8e-21 103.6 59 89.8
Thhalv10016159m.g Eutrema salsugineum HOM05D003924 ORTHO05D005216 1.5e-20 102.8 59 91.5
THA.LOC104809987 Tarenaya hassleriana HOM05D003924 ORTHO05D005216 2.0e-20 102.4 59 89.8
BcaB06g29071 Brassica carinata HOM05D003924 ORTHO05D005216 2.6e-20 102.1 58 89.7
Phvul.009G216500 Phaseolus vulgaris HOM05D003924 ORTHO05D005216 4.4e-20 101.3 59 89.8
Cpa.g.sc1.275 Carica papaya HOM05D003924 ORTHO05D005216 5.7e-20 100.9 59 88.1
Cfa001582 Carpinus fangiana HOM05D003924 ORTHO05D005216 9.7e-20 100.1 59 88.1
Haze_16947 Corylus avellana HOM05D003924 ORTHO05D005216 9.7e-20 100.1 59 88.1
Glyma.09G087900 Glycine max HOM05D003924 ORTHO05D005216 1.3e-19 99.8 59 86.4
Glyma.15G194000 Glycine max HOM05D003924 ORTHO05D005216 1.3e-19 99.8 59 86.4
arahy.Tifrunner.gnm1.ann1.VLH7KT Arachis hypogaea HOM05D003924 ORTHO05D005216 1.7e-19 99.4 59 84.7
CiPaw.01G277600 Carya illinoinensis HOM05D003924 ORTHO05D005216 1.7e-19 99.4 59 88.1
Atru.chr2.540 Acer truncatum HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 83.1
MSTRG.9355 Avicennia marina HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 86.4
Duzib106G1600 Durio zibethinus HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 86.4
FvH4_4g12630 Fragaria vesca HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 84.7
FAN07G1557 Fragaria x ananassa HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 84.7
FAN12G0529 Fragaria x ananassa HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 84.7
FAN17G0927 Fragaria x ananassa HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 84.7
Lalb_Chr11g0073411 Lupinus albus HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 84.7
RcHm_v2.0_Chr3g0482831 Rosa chinensis HOM05D003924 ORTHO05D005216 2.8e-19 98.6 59 84.7
Actinidia03018 Actinidia chinensis HOM05D003924 ORTHO05D005216 3.7e-19 98.2 59 86.4
arahy.Tifrunner.gnm1.ann1.MQZ1GR Arachis hypogaea HOM05D003924 ORTHO05D005216 3.7e-19 98.2 59 83.1
Manes.07G101600 Manihot esculenta HOM05D003924 ORTHO05D005216 3.7e-19 98.2 59 84.7
Potri.008G045400 Populus trichocarpa HOM05D003924 ORTHO05D005216 3.7e-19 98.2 59 84.7
Potri.010G216100 Populus trichocarpa HOM05D003924 ORTHO05D005216 3.7e-19 98.2 59 84.7
Sabra08G0031600 Salix brachista HOM05D003924 ORTHO05D005216 3.7e-19 98.2 59 84.7
CAN.G742.17 Capsicum annuum HOM05D003924 ORTHO05D005216 4.8e-19 97.8 59 86.4
FAN22G0546 Fragaria x ananassa HOM05D003924 ORTHO05D005216 4.8e-19 97.8 59 84.7
Lalb_Chr08g0233271 Lupinus albus HOM05D003924 ORTHO05D005216 4.8e-19 97.8 59 83.1
SalBow1G8295 Salvia bowleyana HOM05D003924 ORTHO05D005216 6.3e-19 97.4 59 84.7
Sopen04g020010 Solanum pennellii HOM05D003924 ORTHO05D005216 6.3e-19 97.4 59 86.4
Ca_02521_v3 Cicer arietinum L. HOM05D003924 ORTHO05D005216 8.2e-19 97.1 59 83.1
COL.COLO4_23765 Corchorus olitorius HOM05D003924 ORTHO05D005216 8.2e-19 97.1 58 84.5
Duzib114G0370 Durio zibethinus HOM05D003924 ORTHO05D005216 8.2e-19 97.1 59 83.1
Gohir.A06G179002 Gossypium hirsutum HOM05D003924 ORTHO05D005216 8.2e-19 97.1 58 86.2
PSO339G1038 Papaver somniferum HOM05D003924 ORTHO05D005216 8.2e-19 97.1 59 84.7
PGR142G3475 Punica granatum HOM05D003924 ORTHO05D005216 8.2e-19 97.1 59 84.7
Thecc.10G066000 Theobroma cacao HOM05D003924 ORTHO05D005216 8.2e-19 97.1 59 83.1
Cc09_g02440 Coffea canephora HOM05D003924 ORTHO05D005216 1.1e-18 96.7 59 84.7
PSO384G1475 Papaver somniferum HOM05D003924 ORTHO05D005216 1.1e-18 96.7 59 84.7
GSVIVG01016353001 Vitis vinifera HOM05D003924 ORTHO05D005216 1.1e-18 96.7 59 84.7
Ciclev10018539m.g Citrus clementina HOM05D003924 ORTHO05D005216 1.4e-18 96.3 59 84.7
MD07G1181100 Malus domestica HOM05D003924 ORTHO05D005216 1.4e-18 96.3 59 83.1
TPR.G31980 Trifolium pratense HOM05D003924 ORTHO05D005216 1.4e-18 96.3 59 83.1
Aqoxy6G01538 Aquilegia oxysepala HOM05D003924 ORTHO05D005216 1.8e-18 95.9 59 86.4
Dinv17348 Davidia involucrata HOM05D003924 ORTHO05D005216 1.8e-18 95.9 59 84.7
MD01G1113500 Malus domestica HOM05D003924 ORTHO05D005216 1.8e-18 95.9 57 86.0
Medtr2g048630 Medicago truncatula HOM05D003924 ORTHO05D005216 1.8e-18 95.9 59 83.1
Duzib128G0369 Durio zibethinus HOM05D003924 ORTHO05D005216 2.4e-18 95.5 59 83.1
Eucgr.G02792 Eucalyptus grandis HOM05D003924 ORTHO05D005216 2.4e-18 95.5 59 81.4
Gohir.D06G174100 Gossypium hirsutum HOM05D003924 ORTHO05D005216 2.4e-18 95.5 58 84.5
Gorai.010G203700 Gossypium raimondii HOM05D003924 ORTHO05D005216 2.4e-18 95.5 58 84.5
Migut.D01216 Erythranthe guttata HOM05D003924 ORTHO05D005216 3.1e-18 95.1 59 81.4
unitig_899.g14816 Utricularia gibba HOM05D003924 ORTHO05D005216 4.1e-18 94.7 59 83.1
CsaV3_5G026020 Cucumis sativus L. HOM05D003924 ORTHO05D005216 5.3e-18 94.4 59 83.1
Lj6g0026487 Lotus japonicus HOM05D003924 ORTHO05D005216 5.3e-18 94.4 58 82.8
Rhsim03G0121600 Rhododendron simsii HOM05D003924 ORTHO05D005216 5.3e-18 94.4 59 81.4
TAR623G0957 Trochodendron aralioides HOM05D003924 ORTHO05D005216 5.3e-18 94.4 59 83.1
vmacro17942 Vaccinium macrocarpon HOM05D003924 ORTHO05D005216 5.3e-18 94.4 59 81.4
ATR0810G286 Amborella trichopoda HOM05D003924 ORTHO05D005216 7.0e-18 94.0 59 79.7
MELO3C025497.2 Cucumis melo HOM05D003924 ORTHO05D005216 7.0e-18 94.0 59 83.1
Nitab4.5_0000561g0080 Nicotiana tabacum HOM05D003924 ORTHO05D005216 7.0e-18 94.0 59 84.7
Nn2g10624 Nelumbo nucifera HOM05D003924 ORTHO05D005216 9.1e-18 93.6 59 81.4
Peaxi162Scf01024g00323 Petunia axillaris HOM05D003924 ORTHO05D005216 9.1e-18 93.6 59 84.7
CSS0019567 Camellia sinensis var. sinensis HOM05D003924 ORTHO05D005216 1.6e-17 92.8 59 81.4
DCAR_027685 Daucus carota HOM05D003924 ORTHO05D005216 1.6e-17 92.8 59 83.1
MBI19_g06147_MAGBIO Magnolia biondii HOM05D003924 ORTHO05D005216 1.6e-17 92.8 59 79.7
Nitab4.5_0000061g0410 Nicotiana tabacum HOM05D003924 ORTHO05D005216 1.6e-17 92.8 59 83.1
Ah.16g101370 Amaranthus hybridus HOM05D003924 ORTHO05D005216 3.5e-17 91.7 59 78.0
CDE01G0014 Ceratophyllum demersum HOM05D003924 ORTHO05D005216 3.5e-17 91.7 59 78.0
Hund16198 Selenicereus undatus HOM05D003924 ORTHO05D005216 3.5e-17 91.7 57 82.5
Prupe.2G220200 Prunus persica HOM05D003924 ORTHO05D005216 5.9e-17 90.9 52 88.5
ClCG09G020390 Citrullus lanatus HOM05D003924 ORTHO05D005216 7.7e-17 90.5 59 79.7
TWI15G1255 Tripterygium wilfordii HOM05D003924 ORTHO05D005216 7.7e-17 90.5 65 75.4
AUR62023203 Chenopodium quinoa HOM05D003924 ORTHO05D005216 1.0e-16 90.1 59 74.6
AUR62023249 Chenopodium quinoa HOM05D003924 ORTHO05D005216 1.0e-16 90.1 59 74.6
Sed0000671 Sechium edule HOM05D003924 ORTHO05D005216 1.3e-16 89.7 59 78.0
EL10Ac2g04495 Beta vulgaris HOM05D003924 ORTHO05D005216 2.9e-16 88.6 60 76.7
Sc10g0000900 Simmondsia chinensis HOM05D003924 ORTHO05D005216 5.0e-16 87.8 55 83.6
Pp3c11_19990 Physcomitrium patens HOM05D003924 ORTHO05D005216 6.5e-16 87.4 59 76.3
ECA238G4557 Erigeron canadensis HOM05D003924 ORTHO05D005216 8.5e-16 87.0 58 75.9
HanXRQChr14g0460881 Helianthus annuus HOM05D003924 ORTHO05D005216 2.5e-15 85.5 55 81.8
SMO116G0081 Selaginella moellendorffii HOM05D003924 ORTHO05D005216 2.5e-15 85.5 59 72.9
Sabra10G0167200 Salix brachista HOM05D003924 ORTHO05D005216 5.5e-15 84.3 50 84.0
Rhsim09G0154800 Rhododendron simsii HOM05D003924 ORTHO05D005216 9.4e-15 83.6 59 74.6
SEGI_04277 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 9.4e-15 83.6 59 76.3
SEGI_05715 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 9.4e-15 83.6 59 76.3
HanXRQChr07g0200911 Helianthus annuus HOM05D003924 ORTHO05D005216 2.1e-14 82.4 58 74.1
Lsat_1_v5_gn_2_116140 Lactuca sativa HOM05D003924 ORTHO05D005216 2.7e-14 82.0 50 84.0
Zm00001eb247890 Zea mays HOM05D003924 ORTHO05D005216 3.6e-14 81.6 62 67.7
Mapoly0202s0011 Marchantia polymorpha HOM05D003924 ORTHO05D005216 8.0e-14 80.5 54 74.1
Zm00001eb185340 Zea mays HOM05D003924 ORTHO05D005216 8.0e-14 80.5 55 72.7
Oeu033837.1 Olea europaea HOM05D003924 ORTHO05D005216 1.3e-11 73.2 42 88.1
CBR_g19436 Chara braunii HOM05D003924 ORTHO05D005216 9.1e-10 67.0 54 59.3
Oeu055057.1 Olea europaea HOM05D001574 ORTHO05D000708 2.7e-09 65.5 58 70.7
HPP92_017237 Vanilla planifolia HOM05D003924 ORTHO05D005216 2.2e-08 62.4 59 59.3
QL08p057163 Quercus lobata HOM05D003924 ORTHO05D005216 5.5e-07 57.8 38 78.9
Lj8C94T13 Lonicera japonica HOM05D003924 ORTHO05D005216 2.1e-06 55.8 54 55.6


User provided reference genes

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