Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 1.8e-221 772.3 407 100.0
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 4.8e-145 518.5 349 81.9
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 9.9e-143 510.8 429 69.0
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 4.9e-142 508.4 422 69.7
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 1.1e-136 490.7 393 67.9
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 6.3e-121 438.3 337 69.1
BcaC09g50676 Brassica carinata HOM05D004448 ORTHO05D015948 2.5e-101 373.2 412 59.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.5e-101 373.2 412 59.0
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 5.2e-99 365.5 441 56.5
BcaNung02444 Brassica carinata HOM05D004448 ORTHO05D015948 5.0e-94 349.0 419 56.6
A01p17460 Brassica napus HOM05D004448 ORTHO05D015948 6.1e-92 342.0 377 54.1
BraA01t01701Z Brassica rapa HOM05D004448 ORTHO05D015948 1.1e-88 331.3 410 50.0
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 3.1e-80 303.1 496 40.3
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 2.9e-78 296.6 484 39.9
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 4.2e-77 292.7 459 46.0
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 1.4e-75 287.7 508 42.7
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 5.2e-75 285.8 516 42.4
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 2.2e-73 280.4 452 40.7
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 6.3e-73 278.9 484 39.3
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 1.1e-72 278.1 478 37.9
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 5.4e-72 275.8 484 39.0
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 2.0e-71 273.9 486 38.5
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 3.5e-71 273.1 463 40.4
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 1.3e-70 271.2 481 38.5
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 2.3e-70 270.4 484 38.4
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 3.9e-70 269.6 486 38.1
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 2.8e-68 263.5 471 40.1
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 1.8e-67 260.8 472 40.5
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 3.1e-67 260.0 466 39.9
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 8.9e-67 258.5 477 38.4
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 7.5e-66 255.4 466 42.7
BraA05t19155Z Brassica rapa HOM05D004448 ORTHO05D005919 1.3e-28 131.7 108 57.4
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 1.6e-28 131.3 332 34.9
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 2.2e-25 120.9 443 28.2
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 4.2e-24 116.7 202 35.6
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 7.1e-24 115.9 507 26.4
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 9.3e-24 115.5 484 26.4
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 9.3e-24 115.5 383 29.0
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 2.1e-23 114.4 204 35.8
Potri.006G150000 Populus trichocarpa HOM05D004448 ORTHO05D005919 2.7e-23 114.0 481 26.6
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 4.6e-23 113.2 503 27.0
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 7.9e-23 112.5 441 27.7
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 7.9e-23 112.5 506 25.7
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 3.9e-22 110.2 404 26.7
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 5.1e-22 109.8 425 26.1
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 5.1e-22 109.8 471 26.3
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 8.7e-22 109.0 431 26.5
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 1.9e-21 107.8 518 25.3
MELO3C015453.2 Cucumis melo HOM05D004448 ORTHO05D005919 3.3e-21 107.1 460 26.3
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 3.3e-21 107.1 252 32.1
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.6e-20 104.8 424 25.7
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 4.8e-20 103.2 495 25.5
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 6.2e-20 102.8 225 32.9
Medtr6g092520 Medicago truncatula HOM05D004448 ORTHO05D005919 2.4e-19 100.9 349 27.8
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 2.4e-19 100.9 422 26.3
Psat1g049640 Pisum sativum HOM05D004448 ORTHO05D005919 5.3e-19 99.8 353 27.2
GSVIVG01015227001 Vitis vinifera HOM05D004448 ORTHO05D005919 6.9e-19 99.4 178 36.5
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 1.2e-18 98.6 493 24.5
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 1.5e-18 98.2 330 28.2
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 2.6e-18 97.4 405 25.9
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 4.5e-18 96.7 379 27.4
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 5.8e-18 96.3 401 25.4
ClCG03G015750 Citrullus lanatus HOM05D004448 ORTHO05D005919 7.6e-18 95.9 252 32.9
Cfa003108 Carpinus fangiana HOM05D004448 ORTHO05D005919 1.0e-17 95.5 171 33.9
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 1.0e-17 95.5 455 24.6
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 2.2e-17 94.4 404 26.5
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 2.2e-17 94.4 188 33.0
Ciclev10008074m.g Citrus clementina HOM05D004448 ORTHO05D005919 2.9e-17 94.0 483 25.3
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 2.9e-17 94.0 339 28.0
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.9e-17 93.2 110 46.4
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.9e-17 93.2 110 46.4
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.9e-17 93.2 110 46.4
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 1.9e-16 91.3 256 31.2
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 1.9e-16 91.3 396 25.8
RcHm_v2.0_Chr2g0093031 Rosa chinensis HOM05D004448 ORTHO05D005919 1.9e-16 91.3 246 29.3
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 2.5e-16 90.9 291 28.9
Glyma.07G128700 Glycine max HOM05D004448 ORTHO05D005919 2.5e-16 90.9 134 38.8
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 5.5e-16 89.7 111 44.1
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 5.5e-16 89.7 109 44.0
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 7.1e-16 89.4 416 25.0
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 9.3e-16 89.0 262 29.4
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 2.1e-15 87.8 545 23.7
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 2.1e-15 87.8 95 46.3
Rhsim03G0233500 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.7e-15 87.4 414 23.9
CsaV3_1G040260 Cucumis sativus L. HOM05D004448 ORTHO05D005919 6.0e-15 86.3 243 31.7
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 6.0e-15 86.3 498 23.7
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 2.3e-14 84.3 139 33.1
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 2.3e-14 84.3 94 44.7
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 5.1e-14 83.2 268 27.2
PSO210G3334 Papaver somniferum HOM05D004448 ORTHO05D005919 6.7e-14 82.8 274 28.5
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 1.9e-13 81.3 430 24.7
Medtr7g090060 Medicago truncatula HOM05D004448 ORTHO05D005919 1.9e-13 81.3 209 29.2
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.9e-13 81.3 232 28.4
CsaV3_UNG066510 Cucumis sativus L. HOM05D004448 ORTHO05D005919 3.3e-13 80.5 234 31.6
Duzib150G0429 Durio zibethinus HOM05D004448 ORTHO05D005919 4.3e-13 80.1 181 32.6
QL02p063021 Quercus lobata HOM05D004448 ORTHO05D005919 5.7e-13 79.7 422 22.5
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 9.6e-13 79.0 265 28.7
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 1.3e-12 78.6 432 23.4
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 1.6e-12 78.2 265 28.7
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 2.1e-12 77.8 140 36.4
Lj2g0008301 Lotus japonicus HOM05D004448 ORTHO05D005919 3.7e-12 77.0 383 24.8
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 3.7e-12 77.0 388 26.0
PGSC0003DMG400033614 Solanum tuberosum HOM05D004448 ORTHO05D005919 4.8e-12 76.6 386 26.4
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 8.2e-12 75.9 325 26.5
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 1.1e-11 75.5 455 25.1
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 1.1e-11 75.5 417 24.5
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 3.1e-11 73.9 93 41.9
CANSAT56G3488 Cannabis sativa HOM05D004448 ORTHO05D005919 4.1e-11 73.6 208 27.9
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 4.1e-11 73.6 265 26.4
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 5.3e-11 73.2 334 25.7
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 6.9e-11 72.8 208 27.9
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 9.0e-11 72.4 394 23.4
Sed0012121 Sechium edule HOM05D004448 ORTHO05D005919 1.5e-10 71.6 169 33.1
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 2.6e-10 70.9 105 37.1
MD02G1075500 Malus domestica HOM05D004448 ORTHO05D005919 3.4e-10 70.5 156 30.8
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 2.9e-09 67.4 390 22.8
CiPaw.03G218000 Carya illinoinensis HOM05D004448 ORTHO05D005919 5.0e-09 66.6 231 28.1
FvH4_1g07231 Fragaria vesca HOM05D004448 ORTHO05D005919 6.5e-09 66.2 128 32.0
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 8.4e-09 65.9 121 36.4
Atru.chr7.1554 Acer truncatum HOM05D004448 ORTHO05D005919 1.1e-08 65.5 314 25.5
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 1.1e-08 65.5 171 30.4
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 1.9e-08 64.7 120 31.7
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 3.2e-08 63.9 357 23.8
CARHR270520 Cardamine hirsuta HOM05D004448 ORTHO05D005919 2.7e-07 60.8 386 26.9
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 1.3e-06 58.5 361 25.8
Os07g0586700 Oryza sativa ssp. japonica HOM05D004448 ORTHO05D005919 6.7e-06 56.2 235 26.0
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 8.7e-06 55.8 81 39.5


User provided reference genes

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