Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G34310 Arabidopsis lyrata HOM05D005984 ORTHO05D007754 2.7e-214 748.4 394 100.0
Carub.0006s2091 Capsella rubella HOM05D005984 ORTHO05D007754 5.5e-199 697.6 412 87.9
AT5G23120 Arabidopsis thaliana HOM05D005984 ORTHO05D007754 2.8e-198 695.3 404 87.9
C07p44410 Brassica napus HOM05D005984 ORTHO05D007754 3.0e-197 691.8 402 87.8
BolC7t44963H Brassica oleracea HOM05D005984 ORTHO05D007754 4.0e-197 691.4 402 87.8
A03p46390 Brassica napus HOM05D005984 ORTHO05D007754 6.8e-197 690.6 405 87.2
BraA03t13765Z Brassica rapa HOM05D005984 ORTHO05D007754 6.8e-197 690.6 405 87.2
Thhalv10004338m.g Eutrema salsugineum HOM05D005984 ORTHO05D007754 8.8e-197 690.3 405 87.2
Sp2g24000 Schrenkiella parvula HOM05D005984 ORTHO05D007754 1.2e-196 689.9 406 91.4
CARHR190410 Cardamine hirsuta HOM05D005984 ORTHO05D007754 2.2e-195 685.6 408 91.7
Aa31LG11G2610 Aethionema arabicum HOM05D005984 ORTHO05D007754 5.4e-194 681.0 413 89.1
THA.LOC104800911 Tarenaya hassleriana HOM05D005984 ORTHO05D007754 7.0e-178 627.5 404 79.2
Cpa.g.sc44.38 Carica papaya HOM05D005984 ORTHO05D007754 6.8e-173 610.9 412 75.2
Glyma.11G100800 Glycine max HOM05D005984 ORTHO05D007754 2.9e-171 605.5 399 76.4
CDE07G0658 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 1.9e-170 602.8 407 78.1
CiPaw.06G060100 Carya illinoinensis HOM05D005984 ORTHO05D007754 3.2e-170 602.1 381 77.4
VMungo1127G1047 Vigna mungo HOM05D005984 ORTHO05D007754 2.1e-169 599.4 399 75.4
Glyma.12G026900 Glycine max HOM05D005984 ORTHO05D007754 3.5e-169 598.6 399 75.4
VMungo0647G2306 Vigna mungo HOM05D005984 ORTHO05D007754 1.3e-168 596.7 363 80.2
Thecc.02G160200 Theobroma cacao HOM05D005984 ORTHO05D007754 1.7e-168 596.3 376 78.7
Gorai.005G210500 Gossypium raimondii HOM05D005984 ORTHO05D007754 2.3e-168 595.9 404 74.3
Phvul.011G029800 Phaseolus vulgaris HOM05D005984 ORTHO05D007754 3.0e-168 595.5 399 74.9
ATR0618G114 Amborella trichopoda HOM05D005984 ORTHO05D007754 3.9e-168 595.1 407 74.2
Gohir.D02G187800 Gossypium hirsutum HOM05D005984 ORTHO05D007754 3.9e-168 595.1 404 74.3
MD13G1005900 Malus domestica HOM05D005984 ORTHO05D007754 3.9e-168 595.1 395 76.5
CsaV3_7G030600 Cucumis sativus L. HOM05D005984 ORTHO05D007754 5.1e-168 594.7 391 75.4
CANSAT56G2432 Cannabis sativa HOM05D005984 ORTHO05D007754 2.5e-167 592.4 383 81.7
Lj3g0024041 Lotus japonicus HOM05D005984 ORTHO05D007754 3.3e-167 592.0 397 80.4
TPR.G32343 Trifolium pratense HOM05D005984 ORTHO05D007754 3.3e-167 592.0 396 74.5
Actinidia13710 Actinidia chinensis HOM05D005984 ORTHO05D007754 4.3e-167 591.7 373 76.7
TWI53G1952 Tripterygium wilfordii HOM05D005984 ORTHO05D007754 4.3e-167 591.7 374 78.9
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea HOM05D005984 ORTHO05D007754 5.6e-167 591.3 393 75.6
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea HOM05D005984 ORTHO05D007754 5.6e-167 591.3 393 75.6
Cfa008738 Carpinus fangiana HOM05D005984 ORTHO05D007754 7.3e-167 590.9 381 76.4
Sed0006813 Sechium edule HOM05D005984 ORTHO05D007754 7.3e-167 590.9 399 75.4
Lalb_Chr03g0024761 Lupinus albus HOM05D005984 ORTHO05D007754 1.6e-166 589.7 396 79.5
ClCG09G004540 Citrullus lanatus HOM05D005984 ORTHO05D007754 2.1e-166 589.3 357 79.8
Psat7g177360 Pisum sativum HOM05D005984 ORTHO05D007754 2.8e-166 589.0 358 79.9
Sed0023953 Sechium edule HOM05D005984 ORTHO05D007754 2.8e-166 589.0 386 80.1
GSVIVG01012045001 Vitis vinifera HOM05D005984 ORTHO05D007754 3.6e-166 588.6 405 73.8
Actinidia38413 Actinidia chinensis HOM05D005984 ORTHO05D007754 4.7e-166 588.2 369 77.5
Gohir.A03G164600 Gossypium hirsutum HOM05D005984 ORTHO05D007754 6.2e-166 587.8 391 75.4
MSTRG.431 Avicennia marina HOM05D005984 ORTHO05D007754 3.1e-165 585.5 405 72.8
TAR629G1998 Trochodendron aralioides HOM05D005984 ORTHO05D007754 1.2e-164 583.6 403 72.7
Dinv11718 Davidia involucrata HOM05D005984 ORTHO05D007754 1.5e-164 583.2 373 81.5
CSS0012805 Camellia sinensis var. sinensis HOM05D005984 ORTHO05D007754 2.0e-164 582.8 356 78.9
Manes.04G064200 Manihot esculenta HOM05D005984 ORTHO05D007754 2.0e-164 582.8 372 81.5
vmacro08597 Vaccinium macrocarpon HOM05D005984 ORTHO05D007754 2.6e-164 582.4 388 80.2
Medtr4g075040 Medicago truncatula HOM05D005984 ORTHO05D007754 7.6e-164 580.9 368 77.2
Ca_19021_v3 Cicer arietinum L. HOM05D005984 ORTHO05D007754 1.7e-163 579.7 380 75.5
Atru.chr11.1117 Acer truncatum HOM05D005984 ORTHO05D007754 2.2e-163 579.3 402 77.6
Manes.11G108100 Manihot esculenta HOM05D005984 ORTHO05D007754 2.2e-163 579.3 390 79.7
Prupe.1G347100 Prunus persica HOM05D005984 ORTHO05D007754 2.2e-163 579.3 371 82.5
MD16G1002000 Malus domestica HOM05D005984 ORTHO05D007754 2.9e-163 578.9 404 78.5
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 4.9e-163 578.2 360 79.2
Duzib052G0297 Durio zibethinus HOM05D005984 ORTHO05D007754 6.4e-163 577.8 354 78.2
Zm00001eb271820 Zea mays HOM05D005984 ORTHO05D007754 6.4e-163 577.8 383 74.9
FAN12G1392 Fragaria x ananassa HOM05D005984 ORTHO05D007754 1.1e-162 577.0 391 80.3
COL.COLO4_19602 Corchorus olitorius HOM05D005984 ORTHO05D007754 1.4e-162 576.6 435 68.7
FvH4_4g36890 Fragaria vesca HOM05D005984 ORTHO05D007754 1.4e-162 576.6 392 80.1
RcHm_v2.0_Chr4g0446671 Rosa chinensis HOM05D005984 ORTHO05D007754 1.4e-162 576.6 407 77.4
Sopen02g003530 Solanum pennellii HOM05D005984 ORTHO05D007754 1.2e-161 573.5 365 78.6
PGSC0003DMG400002324 Solanum tuberosum HOM05D005984 ORTHO05D007754 1.2e-161 573.5 363 78.5
Potri.007G071300 Populus trichocarpa HOM05D005984 ORTHO05D007754 2.7e-161 572.4 377 74.5
PSO782G0234 Papaver somniferum HOM05D005984 ORTHO05D007754 3.5e-161 572.0 415 71.1
Ciclev10031672m.g Citrus clementina HOM05D005984 ORTHO05D007754 6.0e-161 571.2 414 74.4
DCAR_002576 Daucus carota HOM05D005984 ORTHO05D007754 6.0e-161 571.2 358 77.1
Sabra07G0060100 Salix brachista HOM05D005984 ORTHO05D007754 6.0e-161 571.2 377 74.3
PSO063G6567 Papaver somniferum HOM05D005984 ORTHO05D007754 1.0e-160 570.5 355 78.6
PGR044G2022 Punica granatum HOM05D005984 ORTHO05D007754 1.0e-160 570.5 360 77.5
Aqoxy3G04258 Aquilegia oxysepala HOM05D005984 ORTHO05D007754 1.3e-160 570.1 368 76.1
ECA246G1868 Erigeron canadensis HOM05D005984 ORTHO05D007754 1.3e-160 570.1 367 81.2
CAN.G157.24 Capsicum annuum HOM05D005984 ORTHO05D007754 3.9e-160 568.5 391 74.2
Oeu026903.3 Olea europaea HOM05D005984 ORTHO05D007754 3.9e-160 568.5 417 75.5
unitig_8.g2892 Utricularia gibba HOM05D005984 ORTHO05D007754 3.9e-160 568.5 385 74.3
Cc11_g02280 Coffea canephora HOM05D005984 ORTHO05D007754 5.1e-160 568.2 389 72.8
Os06g0729650 Oryza sativa ssp. japonica HOM05D005984 ORTHO05D007754 8.6e-160 567.4 369 75.9
Haze_11755 Corylus avellana HOM05D005984 ORTHO05D007754 1.1e-159 567.0 391 72.4
HPP92_012878 Vanilla planifolia HOM05D005984 ORTHO05D007754 1.5e-159 566.6 373 76.1
AUR62017696 Chenopodium quinoa HOM05D005984 ORTHO05D007754 4.3e-159 565.1 354 83.1
Eucgr.J00865 Eucalyptus grandis HOM05D005984 ORTHO05D007754 5.6e-159 564.7 358 81.8
FAN07G1379 Fragaria x ananassa HOM05D005984 ORTHO05D007754 5.6e-159 564.7 420 75.0
Lj3A850G95 Lonicera japonica HOM05D005984 ORTHO05D007754 5.6e-159 564.7 410 70.7
Lsat_1_v5_gn_3_35480 Lactuca sativa HOM05D005984 ORTHO05D007754 8.1e-158 560.8 360 80.8
SGA_v2.0_scaffold88G27230 Striga asiatica HOM05D005984 ORTHO05D007754 8.1e-158 560.8 362 80.4
Hund08579 Selenicereus undatus HOM05D005984 ORTHO05D007754 1.8e-157 559.7 380 74.2
AUR62015232 Chenopodium quinoa HOM05D005984 ORTHO05D007754 5.2e-157 558.1 327 86.9
AUR62015234 Chenopodium quinoa HOM05D005984 ORTHO05D007754 5.2e-157 558.1 327 86.9
EL10Ac9g22946 Beta vulgaris HOM05D005984 ORTHO05D007754 1.5e-156 556.6 418 68.9
MELO3C023596.2 Cucumis melo HOM05D005984 ORTHO05D007754 2.2e-155 552.7 365 75.3
Rhsim04G0167300 Rhododendron simsii HOM05D005984 ORTHO05D007754 3.2e-154 548.9 389 71.7
SalBow2G1456 Salvia bowleyana HOM05D005984 ORTHO05D007754 7.8e-153 544.3 462 66.2
Nn3g18651 Nelumbo nucifera HOM05D005984 ORTHO05D007754 1.3e-152 543.5 383 71.5
Migut.E00699 Erythranthe guttata HOM05D005984 ORTHO05D007754 3.0e-152 542.3 388 71.9
Solyc02g014150.4 Solanum lycopersicum HOM05D005984 ORTHO05D007754 3.6e-150 535.4 344 78.2
SMO347G0352 Selaginella moellendorffii HOM05D005984 ORTHO05D007754 8.1e-150 534.3 382 68.6
QL03p045967 Quercus lobata HOM05D005984 ORTHO05D007754 9.0e-149 530.8 452 61.3
HanXRQChr17g0544921 Helianthus annuus HOM05D005984 ORTHO05D007754 3.4e-148 528.9 337 81.9
HanXRQChr06g0171511 Helianthus annuus HOM05D005984 ORTHO05D007754 4.5e-148 528.5 380 75.8
Pp3c15_7930 Physcomitrium patens HOM05D005984 ORTHO05D007754 6.4e-147 524.6 371 75.2
Sc10g0006780 Simmondsia chinensis HOM05D005984 ORTHO05D007754 8.4e-147 524.2 352 74.4
Ah.01g001560 Amaranthus hybridus HOM05D005984 ORTHO05D007754 2.7e-145 519.2 388 69.6
CDE04G0799 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 6.7e-144 514.6 407 71.0
Pp3c9_10350 Physcomitrium patens HOM05D005984 ORTHO05D007754 1.5e-143 513.5 368 75.3
Nitab4.5_0000133g0050 Nicotiana tabacum HOM05D005984 ORTHO05D007754 1.6e-142 510.0 539 57.3
Nitab4.5_0006277g0020 Nicotiana tabacum HOM05D005984 ORTHO05D007754 3.2e-138 495.7 569 53.8
Mapoly0020s0149 Marchantia polymorpha HOM05D005984 ORTHO05D007754 4.2e-138 495.4 364 67.0
Peaxi162Scf00363g00317 Petunia axillaris HOM05D005984 ORTHO05D007754 2.6e-132 476.1 485 59.0
CBR_g11122 Chara braunii HOM05D005984 ORTHO05D007754 9.3e-122 441.0 384 63.8
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis HOM05D005984 ORTHO05D007754 1.2e-113 414.1 369 62.9
FAN17G0887 Fragaria x ananassa HOM05D005984 ORTHO05D007754 3.9e-112 409.1 419 60.4
MCO05G498 Micromonas commoda HOM05D005984 ORTHO05D007754 1.5e-108 397.1 370 58.4
Dinv01185 Davidia involucrata HOM05D005984 ORTHO05D007754 8.5e-107 391.3 203 91.1
Cre06.g273700 Chlamydomonas reinhardtii HOM05D005984 ORTHO05D007754 3.0e-104 382.9 387 56.8
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 6.1e-97 358.6 209 81.8
PRCOL_00000217 Prasinoderma coloniale HOM05D005984 ORTHO05D007754 1.4e-77 294.3 298 55.7
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 1.7e-59 234.2 376 41.5
MD15G1106700 Malus domestica HOM05D005984 ORTHO05D007754 3.6e-57 226.5 114 90.4
C09p07860 Brassica napus HOM05D005984 ORTHO05D007754 8.3e-54 215.3 181 66.3
BcaB04g19886 Brassica carinata HOM05D005984 ORTHO05D007754 8.4e-46 188.7 211 55.0
SEGI_34707 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 5.4e-45 186.0 122 73.0
MD00G1043400 Malus domestica HOM05D005984 ORTHO05D007754 1.5e-42 177.9 111 77.5
HanXRQChr10g0318441 Helianthus annuus HOM05D005984 ORTHO05D007754 1.2e-31 141.7 69 91.3
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 5.1e-27 126.3 85 71.8
AUR62024854 Chenopodium quinoa HOM05D005984 ORTHO05D007754 1.1e-26 125.2 73 83.6
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 7.4e-26 122.5 84 70.2
C09p07870 Brassica napus HOM05D005984 ORTHO05D042888 7.6e-23 112.5 103 59.2
SEGI_27749 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 1.3e-19 101.7 53 84.9
MBI03_g15323_MAGBIO Magnolia biondii HOM05D002934 ORTHO05D003937 2.4e-16 90.9 43 95.3
BolC9t53702H Brassica oleracea HOM05D005984 ORTHO05D042888 1.7e-14 84.7 63 68.3
Zm00001eb227280 Zea mays HOM05D005984 ORTHO05D007754 2.1e-12 77.8 62 64.5
Glyma.01G000174 Glycine max HOM05D036214 ORTHO05D007754 3.9e-11 73.6 43 79.1
Glyma.06G237300 Glycine max HOM05D005984 ORTHO05D007754 3.3e-10 70.5 70 55.7
Pp3c24_8290 Physcomitrium patens HOM05D013586 ORTHO05D011470 1.3e-09 68.6 38 76.3
AUR62043071 Chenopodium quinoa HOM05D003339 ORTHO05D003847 4.5e-07 60.1 76 44.7
SGA_v2.0_scaffold57G20111 Striga asiatica HOM05D005984 ORTHO05D402503 5.9e-07 59.7 44 59.1


User provided reference genes

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