Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G34440 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 9.2e-212 740.0 374 100.0
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 1.2e-203 713.0 361 99.4
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 6.9e-191 670.6 361 92.5
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 1.6e-176 622.9 361 87.8
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 9.0e-175 617.1 361 86.1
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 2.4e-167 592.4 361 84.5
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 4.1e-167 591.7 364 84.6
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 7.4e-153 544.3 361 77.0
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 8.8e-138 494.2 367 72.5
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 2.8e-136 489.2 367 71.7
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 2.8e-136 489.2 367 70.8
BcaC02g12882 Brassica carinata HOM05D004933 ORTHO05D005465 3.7e-136 488.8 367 71.7
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 3.7e-136 488.8 367 70.8
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 9.1e-135 484.2 362 69.6
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.3e-93 347.4 367 52.9
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 2.3e-93 346.7 372 52.4
QL08p065080 Quercus lobata HOM05D004933 ORTHO05D005465 3.0e-93 346.3 368 53.8
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.1e-92 344.4 372 50.8
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 2.5e-92 343.2 366 52.7
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 4.3e-92 342.4 366 51.4
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 5.6e-92 342.0 366 52.7
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 7.3e-92 341.7 369 51.8
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 1.2e-91 340.9 368 53.8
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 3.6e-91 339.3 369 51.8
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 8.1e-91 338.2 371 51.8
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 8.1e-91 338.2 370 51.6
Hma1.2p1_0264F.1_g105950 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.4e-90 337.4 369 50.4
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 4.0e-90 335.9 369 50.9
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 4.0e-90 335.9 369 51.2
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 3.4e-89 332.8 375 51.5
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 1.3e-88 330.9 369 51.8
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 2.2e-88 330.1 372 50.3
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 6.4e-88 328.6 365 50.1
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 1.4e-87 327.4 370 48.4
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 1.9e-87 327.0 368 51.1
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 3.2e-87 326.2 366 49.2
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 4.2e-87 325.9 366 50.0
FAN03G3286 Fragaria x ananassa HOM05D004933 ORTHO05D005465 3.5e-86 322.8 376 50.3
COL.COLO4_19474 Corchorus olitorius HOM05D004933 ORTHO05D005465 4.6e-86 322.4 348 51.1
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 4.6e-86 322.4 374 50.5
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 3.0e-85 319.7 373 48.3
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 1.9e-84 317.0 367 48.8
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 3.3e-84 316.2 373 50.1
VMungo0647G1932 Vigna mungo HOM05D004933 ORTHO05D005465 9.6e-84 314.7 372 50.0
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 1.3e-83 314.3 373 48.8
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 4.8e-83 312.4 367 48.5
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 1.1e-82 311.2 370 50.0
Hma1.2p1_1805F.1_g303150 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 2.4e-82 310.1 349 50.1
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 6.9e-82 308.5 374 47.3
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 1.3e-80 304.3 367 48.0
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 3.8e-80 302.8 366 48.6
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 4.9e-80 302.4 379 48.5
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 4.9e-80 302.4 379 47.8
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.1e-79 301.2 379 47.8
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 7.1e-79 298.5 367 48.5
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 9.3e-79 298.1 348 49.1
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 4.6e-78 295.8 381 47.2
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 2.3e-77 293.5 365 46.6
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 2.3e-77 293.5 365 47.1
Nitab4.5_0006356g0020 Nicotiana tabacum HOM05D004933 ORTHO05D005465 3.0e-77 293.1 376 46.0
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 1.3e-75 287.7 361 45.4
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 3.7e-75 286.2 369 44.7
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 3.7e-75 286.2 365 45.8
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 4.8e-75 285.8 345 47.8
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 4.8e-75 285.8 367 48.5
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 8.1e-75 285.0 348 47.4
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 1.8e-74 283.9 345 47.2
Oeu064001.1 Olea europaea HOM05D004933 ORTHO05D005465 6.9e-74 282.0 402 41.8
Nitab4.5_0000171g0280 Nicotiana tabacum HOM05D004933 ORTHO05D005465 1.2e-73 281.2 375 44.5
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 4.5e-73 279.3 372 43.5
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 1.3e-72 277.7 370 44.3
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 1.1e-71 274.6 370 42.7
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 1.1e-71 274.6 344 47.4
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 1.6e-70 270.8 367 43.3
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 5.1e-69 265.8 371 42.9
Solyc12g043070.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 5.1e-69 265.8 340 44.4
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 1.9e-68 263.8 365 41.9
Solyc07g064540.3 Solanum lycopersicum HOM05D004933 ORTHO05D005465 3.3e-68 263.1 362 43.1
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 1.3e-67 261.2 381 44.9
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 1.6e-67 260.8 373 43.4
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 1.4e-66 257.7 372 43.3
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 2.0e-65 253.8 370 43.5
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 2.6e-65 253.4 370 44.1
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 6.5e-64 248.8 370 41.6
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 1.4e-63 247.7 222 57.2
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 2.5e-63 246.9 380 42.1
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 1.2e-62 244.6 378 40.7
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 2.3e-61 240.4 386 41.2
FAN18G3827 Fragaria x ananassa HOM05D004933 ORTHO05D005465 3.0e-61 240.0 378 41.3
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 3.4e-57 226.5 368 40.5
Sopen03g025600 Solanum pennellii HOM05D004933 ORTHO05D005465 5.7e-52 209.1 283 43.8
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 1.9e-47 194.1 372 38.7
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 6.1e-46 189.1 291 43.3
Sopen03g025610 Solanum pennellii HOM05D004933 ORTHO05D005465 2.4e-42 177.2 177 50.3
CDE04G3054 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 5.0e-40 169.5 290 40.3
PSO063G4276 Papaver somniferum HOM05D004933 ORTHO05D005465 7.7e-33 145.6 164 48.8
Pp3c18_13500 Physcomitrium patens HOM05D004933 ORTHO05D005465 1.8e-29 134.4 413 29.1
Prupe.2G265500 Prunus persica HOM05D004933 ORTHO05D005465 2.9e-24 117.1 96 56.2
LjContig00408g0027695 Lotus japonicus HOM05D004933 ORTHO05D005465 1.9e-23 114.4 103 54.4
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis HOM05D004933 ORTHO05D005465 2.1e-22 110.9 384 29.9
CDE04G2226 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 1.6e-17 94.7 86 51.2
Sopen10g016820 Solanum pennellii HOM05D004933 ORTHO05D005465 7.7e-17 92.4 163 36.8
Solyc09g042480.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 1.3e-16 91.7 108 46.3
Actinidia31635 Actinidia chinensis HOM05D004933 ORTHO05D005465 1.6e-14 84.7 71 53.5
SMO361G0687 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 6.3e-11 72.8 152 30.9
Hma1.2p1_1805F.1_g303160 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.6e-06 58.2 48 56.2


User provided reference genes

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