Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL487U10010 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 1.6e-49 199.1 104 100.0
AL6G19130 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 4.8e-49 197.6 104 99.0
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 6.9e-48 193.7 104 98.1
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 1.2e-47 193.0 104 96.2
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 9.9e-47 189.9 104 94.2
CARHR204520 Cardamine hirsuta HOM05D000070 ORTHO05D006627 5.4e-45 184.1 106 92.5
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 2.7e-44 181.8 104 90.4
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 7.9e-44 180.3 104 89.4
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 7.9e-44 180.3 104 90.4
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 1.7e-43 179.1 104 88.5
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 8.7e-43 176.8 104 86.5
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 9.9e-39 163.3 99 84.8
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 1.4e-37 159.5 99 81.8
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 1.9e-34 149.1 108 74.1
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 2.1e-33 145.6 108 72.2
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 4.8e-33 144.4 108 73.1
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 5.3e-32 141.0 107 70.1
SalBow7G0065 Salvia bowleyana HOM05D000070 ORTHO05D006627 6.9e-32 140.6 108 71.3
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 6.9e-32 140.6 108 70.4
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 9.0e-32 140.2 108 71.3
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 2.0e-31 139.0 108 69.4
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 2.0e-31 139.0 108 69.4
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 3.4e-31 138.3 108 70.4
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 4.5e-31 137.9 108 67.6
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 7.6e-31 137.1 108 68.5
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 1.0e-30 136.7 108 67.6
Dinv05863 Davidia involucrata HOM05D000070 ORTHO05D006627 1.7e-30 136.0 108 67.6
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 2.2e-30 135.6 108 67.6
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 2.9e-30 135.2 108 65.7
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 3.8e-30 134.8 108 68.5
CSS0018377 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 4.9e-30 134.4 108 66.7
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 6.5e-30 134.0 108 65.7
CSS0020064 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 1.1e-29 133.3 108 65.7
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 1.1e-29 133.3 108 67.6
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 1.4e-29 132.9 108 67.6
Nitab4.5_0003485g0050 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.4e-29 132.9 108 65.7
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 1.4e-29 132.9 108 66.7
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 1.9e-29 132.5 108 66.7
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.9e-29 132.5 108 66.7
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 1.9e-29 132.5 108 67.6
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 1.9e-29 132.5 108 65.7
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 2.5e-29 132.1 108 66.7
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 2.5e-29 132.1 108 66.7
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 2.5e-29 132.1 108 66.7
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 2.5e-29 132.1 108 67.6
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 2.5e-29 132.1 108 65.7
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 3.2e-29 131.7 108 66.7
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 3.2e-29 131.7 108 65.7
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 4.2e-29 131.3 109 67.9
Hma1.2p1_1220F.1_g268010 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 4.2e-29 131.3 108 65.7
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 5.5e-29 131.0 108 65.7
FAN16G0001 Fragaria x ananassa HOM05D000070 ORTHO05D006627 5.5e-29 131.0 108 66.7
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 7.1e-29 130.6 108 67.6
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 7.1e-29 130.6 108 68.5
Sc07g0007680 Simmondsia chinensis HOM05D000070 ORTHO05D006627 7.1e-29 130.6 108 67.6
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 9.3e-29 130.2 108 65.7
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 9.3e-29 130.2 108 63.0
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 9.3e-29 130.2 108 66.7
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 1.2e-28 129.8 108 66.7
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.6e-28 129.4 108 66.7
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 1.6e-28 129.4 108 65.7
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 2.1e-28 129.0 108 66.7
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 2.7e-28 128.6 91 71.4
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 7.9e-28 127.1 107 62.6
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 2.3e-27 125.6 92 68.5
Sed0002344 Sechium edule HOM05D000070 ORTHO05D006627 2.3e-27 125.6 91 69.2
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 3.9e-27 124.8 91 70.3
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 3.9e-27 124.8 91 68.1
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 3.9e-27 124.8 108 63.9
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 5.1e-27 124.4 108 60.2
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 8.7e-27 123.6 91 65.9
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 8.7e-27 123.6 108 64.8
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 1.5e-26 122.9 109 63.3
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 1.5e-26 122.9 109 63.3
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 5.7e-26 120.9 100 65.0
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 7.4e-26 120.6 91 67.0
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 1.3e-25 119.8 98 64.3
SGA_v2.0_scaffold2748G54197 Striga asiatica HOM05D000070 ORTHO05D006627 1.3e-25 119.8 91 73.6
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 1.6e-25 119.4 108 61.1
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 1.6e-25 119.4 99 62.6
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 2.1e-25 119.0 91 64.8
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 3.7e-25 118.2 116 55.2
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 6.2e-25 117.5 91 65.9
Lj4A664G63 Lonicera japonica HOM05D000070 ORTHO05D006627 5.3e-24 114.4 83 68.7
Lj4A674G56 Lonicera japonica HOM05D000070 ORTHO05D006627 5.3e-24 114.4 83 68.7
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 6.9e-24 114.0 116 55.2
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 1.5e-23 112.8 91 64.8
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 3.4e-23 111.7 92 64.1
CDE02G2199 Ceratophyllum demersum HOM05D000070 ORTHO05D006627 3.4e-23 111.7 108 56.5
SEGI_19101 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 8.4e-22 107.1 110 53.6
SEGI_30204 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 8.4e-22 107.1 110 53.6
SHI32169 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-21 105.1 90 58.9
Mapoly0173s0010 Marchantia polymorpha HOM05D000070 ORTHO05D006627 1.8e-19 99.4 110 50.0
Pp3c8_20390 Physcomitrium patens HOM05D000070 ORTHO05D006627 5.7e-18 94.4 111 49.5
AagrBONN_evm.TU.Sc2ySwM_228.802 Anthoceros agrestis HOM05D000070 ORTHO05D006627 2.2e-17 92.4 115 50.4
Zm00001eb176300 Zea mays HOM05D000070 ORTHO05D006627 2.6e-15 85.5 105 44.8
Os08g0556550 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006627 2.2e-14 82.4 106 46.2
Gorai.002G198500 Gossypium raimondii HOM05D000070 ORTHO05D006627 4.2e-13 78.2 63 60.3
Gohir.A08G088224 Gossypium hirsutum HOM05D000070 ORTHO05D006627 4.6e-12 74.7 80 51.2
SMO236G0075 Selaginella moellendorffii HOM05D000070 ORTHO05D006627 6.7e-11 70.9 93 43.0
Gohir.D01G159950 Gossypium hirsutum HOM05D000070 ORTHO05D006627 3.7e-09 65.1 52 61.5
PRCOL_00006764 Prasinoderma coloniale HOM05D000070 ORTHO05D006627 1.5e-07 59.7 117 39.3


User provided reference genes

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