Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p48100 Brassica napus HOM05D007946 ORTHO05D004325 7.7e-150 533.9 287 100.0
BraA09t40264Z Brassica rapa HOM05D007946 ORTHO05D004325 1.3e-128 463.4 299 83.6
BraA09t38795Z Brassica rapa HOM05D007946 ORTHO05D004325 2.2e-120 436.0 285 81.4
A09p32530 Brassica napus HOM05D007946 ORTHO05D004325 4.6e-118 428.3 285 79.6
BcaC07g39831 Brassica carinata HOM05D007946 ORTHO05D004325 6.6e-117 424.5 261 87.4
C08p30320 Brassica napus HOM05D007946 ORTHO05D004325 1.7e-112 409.8 290 77.6
BcaB01g00130 Brassica carinata HOM05D007946 ORTHO05D004325 3.3e-84 315.8 291 67.0
C08p30340 Brassica napus HOM05D007946 ORTHO05D004325 2.6e-81 306.2 300 63.3
BolC8t50656H Brassica oleracea HOM05D007946 ORTHO05D004325 2.9e-80 302.8 304 62.5
BraA09t38796Z Brassica rapa HOM05D007946 ORTHO05D004325 3.9e-77 292.4 276 65.2
A09p32540 Brassica napus HOM05D007946 ORTHO05D004325 7.4e-76 288.1 276 64.1
BolC8t50655H Brassica oleracea HOM05D007946 ORTHO05D004325 5.5e-71 271.9 179 84.9
BcaC07g39832 Brassica carinata HOM05D007946 ORTHO05D004325 1.6e-62 243.8 304 55.3
BcaB01g00129 Brassica carinata HOM05D007946 ORTHO05D004325 1.6e-54 217.2 300 52.7
Sp1g35160 Schrenkiella parvula HOM05D007946 ORTHO05D004325 9.4e-47 191.4 317 45.1
BolC6t35452H Brassica oleracea HOM05D007946 ORTHO05D004325 2.8e-43 179.9 241 51.9
A08p14850 Brassica napus HOM05D007946 ORTHO05D004325 9.1e-42 174.9 305 43.6
BraA06t23637Z Brassica rapa HOM05D007946 ORTHO05D004325 3.5e-41 172.9 264 47.3
BcaC08g43062 Brassica carinata HOM05D007946 ORTHO05D004325 1.0e-40 171.4 256 47.3
C06p03210 Brassica napus HOM05D007946 ORTHO05D004325 1.0e-40 171.4 269 46.8
BolC6t35453H Brassica oleracea HOM05D007946 ORTHO05D004325 2.2e-40 170.2 269 46.5
BcaNung06274 Brassica carinata HOM05D007946 ORTHO05D004325 8.5e-40 168.3 236 50.0
A06p04330 Brassica napus HOM05D007946 ORTHO05D004325 1.1e-39 167.9 258 46.9
Thhalv10002808m.g Eutrema salsugineum HOM05D007946 ORTHO05D004325 1.1e-39 167.9 258 46.9
A06p04090 Brassica napus HOM05D007946 ORTHO05D004325 1.9e-39 167.2 292 44.5
A07p06920 Brassica napus HOM05D007946 ORTHO05D004325 2.1e-38 163.7 308 41.6
BraA07t28483Z Brassica rapa HOM05D007946 ORTHO05D004325 2.1e-38 163.7 308 41.6
BcaB07g33730 Brassica carinata HOM05D007946 ORTHO05D004325 5.7e-36 155.6 266 43.6
BcaB07g33784 Brassica carinata HOM05D007946 ORTHO05D004325 5.7e-36 155.6 266 43.6
BcaC08g46035 Brassica carinata HOM05D007946 ORTHO05D004325 1.0e-32 144.8 252 44.8
Sp5g22080 Schrenkiella parvula HOM05D007946 ORTHO05D004325 2.7e-30 136.7 258 40.3
AL6G40090 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 3.6e-30 136.3 268 38.8
BraA08t33469Z Brassica rapa HOM05D007946 ORTHO05D004325 8.0e-30 135.2 159 54.1
AL6G38960 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 3.0e-29 133.3 268 39.2
BcaB04g17499 Brassica carinata HOM05D007946 ORTHO05D004325 5.2e-29 132.5 267 39.3
Thhalv10005452m.g Eutrema salsugineum HOM05D007946 ORTHO05D004325 5.2e-29 132.5 299 36.5
AT5G27580 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 1.2e-28 131.3 236 39.0
AL6G38970 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 2.0e-28 130.6 276 38.0
AL6G40080 Arabidopsis lyrata HOM05D007946 ORTHO05D004325 3.4e-28 129.8 262 38.2
BolC6t35438H Brassica oleracea HOM05D007946 ORTHO05D004325 5.7e-28 129.0 140 57.9
Thhalv10005435m.g Eutrema salsugineum HOM05D007946 ORTHO05D004325 1.3e-27 127.9 281 36.7
Carub.0006s2465 Capsella rubella HOM05D007946 ORTHO05D004325 2.8e-27 126.7 249 40.2
BcaB03g15376 Brassica carinata HOM05D007946 ORTHO05D004325 4.8e-27 125.9 248 40.3
Carub.0006s2523 Capsella rubella HOM05D007946 ORTHO05D004325 6.3e-27 125.6 248 39.1
BcaB07g33736 Brassica carinata HOM05D007946 ORTHO05D004325 1.1e-26 124.8 139 54.0
A07p32380 Brassica napus HOM05D007946 ORTHO05D004325 1.8e-26 124.0 247 41.3
BraA07t30861Z Brassica rapa HOM05D007946 ORTHO05D004325 1.8e-26 124.0 247 41.3
AT5G26950 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 3.1e-26 123.2 267 37.5
AT5G27944 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 3.1e-26 123.2 238 39.1
AT5G27070 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 5.4e-26 122.5 275 37.5
BcaC08g43051 Brassica carinata HOM05D007946 ORTHO05D004325 3.5e-25 119.8 207 43.0
C06p03600 Brassica napus HOM05D007946 ORTHO05D004325 5.0e-24 115.9 152 46.7
BcaNung06357 Brassica carinata HOM05D007946 ORTHO05D004325 2.5e-23 113.6 212 42.5
BolC6t35593H Brassica oleracea HOM05D007946 ORTHO05D004325 2.5e-23 113.6 212 42.5
BcaNung05019 Brassica carinata HOM05D007946 ORTHO05D004325 4.2e-23 112.8 225 40.0
CARHR186490 Cardamine hirsuta HOM05D007946 ORTHO05D004325 7.2e-23 112.1 138 47.8
CARHR186690 Cardamine hirsuta HOM05D007946 ORTHO05D004325 7.2e-23 112.1 138 47.1
BcaC08g43096 Brassica carinata HOM05D007946 ORTHO05D004325 2.1e-22 110.5 224 39.7
C06p03120 Brassica napus HOM05D007946 ORTHO05D004325 3.6e-22 109.8 205 40.5
BolC6t35430H Brassica oleracea HOM05D007946 ORTHO05D004325 3.6e-22 109.8 205 40.5
AT5G27090 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 1.3e-19 101.3 145 44.8
BcaB04g17058 Brassica carinata HOM05D007946 ORTHO05D004325 1.7e-19 100.9 198 40.9
AT5G26865 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 2.8e-19 100.1 107 49.5
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 3.7e-19 99.8 217 37.8
C06p38290 Brassica napus HOM05D007946 ORTHO05D004325 1.4e-18 97.8 100 57.0
BolC6t38928H Brassica oleracea HOM05D007946 ORTHO05D004325 1.4e-18 97.8 100 57.0
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.8e-18 97.4 209 38.3
Carub.0007s3561 Capsella rubella HOM05D006887 ORTHO05D004325 9.2e-18 95.1 194 37.1
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 1.2e-17 94.7 313 30.7
AT5G40220 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.0e-17 94.0 200 38.0
AT5G38740 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.5e-17 93.2 196 36.7
Sp1g35560 Schrenkiella parvula HOM05D007946 ORTHO05D004325 3.5e-17 93.2 233 38.6
AT5G27050 Arabidopsis thaliana HOM05D007946 ORTHO05D004325 5.9e-17 92.4 102 49.0
AT5G39750 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 7.8e-17 92.0 201 35.8
Carub.0007s3594 Capsella rubella HOM05D006887 ORTHO05D004325 1.0e-16 91.7 266 31.6
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 2.3e-16 90.5 206 35.4
Sp1g35140 Schrenkiella parvula HOM05D007946 ORTHO05D004325 2.9e-16 90.1 216 38.0
AL7G50480 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 8.6e-16 88.6 199 36.2
AT5G41200 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.1e-15 88.2 262 31.7
AT5G39810 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.5e-15 87.0 188 35.6
Carub.0003s1843 Capsella rubella HOM05D006887 ORTHO05D004325 2.5e-15 87.0 332 30.4
AL7G50550 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 3.3e-15 86.7 200 35.5
AL8G42910 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 2.1e-14 84.0 221 32.1
AT5G65330 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.1e-14 84.0 240 35.4
AT5G40120 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.6e-14 83.2 234 31.2
Carub.0003s3325 Capsella rubella HOM05D006887 ORTHO05D004325 4.7e-14 82.8 260 32.3
BcaB04g20759 Brassica carinata HOM05D006887 ORTHO05D004325 8.0e-14 82.0 125 43.2
BolC5t33421H Brassica oleracea HOM05D006887 ORTHO05D004325 8.0e-14 82.0 269 33.5
BraA05t21939Z Brassica rapa HOM05D006887 ORTHO05D004325 2.3e-13 80.5 262 32.4
CARHR094030 Cardamine hirsuta HOM05D006887 ORTHO05D004325 2.3e-13 80.5 301 29.6
BcaC05g28586 Brassica carinata HOM05D006887 ORTHO05D004325 3.1e-13 80.1 269 33.1
Carub.0007s3559 Capsella rubella HOM05D006887 ORTHO05D004325 4.4e-12 76.3 261 30.3
BcaC01g03686 Brassica carinata HOM05D006887 ORTHO05D004325 5.8e-12 75.9 291 31.6
BcaC09g48822 Brassica carinata HOM05D006887 ORTHO05D004325 5.8e-12 75.9 256 32.0
A01p35810 Brassica napus HOM05D006887 ORTHO05D004325 5.8e-12 75.9 125 45.6
C01p45590 Brassica napus HOM05D006887 ORTHO05D004325 5.8e-12 75.9 256 32.0
C03p49630 Brassica napus HOM05D006887 ORTHO05D004325 5.8e-12 75.9 291 31.6
BolC1t04520H Brassica oleracea HOM05D006887 ORTHO05D004325 5.8e-12 75.9 256 32.0
A04p12860 Brassica napus HOM05D006887 ORTHO05D004325 7.5e-12 75.5 83 51.8
BraA01t03660Z Brassica rapa HOM05D006887 ORTHO05D004325 7.5e-12 75.5 125 45.6
BraA04t16949Z Brassica rapa HOM05D006887 ORTHO05D004325 7.5e-12 75.5 83 51.8
AT3G18650 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 9.8e-12 75.1 237 29.1
A02p43880 Brassica napus HOM05D006887 ORTHO05D004325 1.3e-11 74.7 201 30.3
BraA02t09311Z Brassica rapa HOM05D006887 ORTHO05D004325 1.3e-11 74.7 201 30.3
BraA04t16961Z Brassica rapa HOM05D006887 ORTHO05D004325 1.7e-11 74.3 101 44.6
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 2.2e-11 73.9 126 38.9
AT4G11250 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.9e-11 73.6 269 27.5
BraA04t16959Z Brassica rapa HOM05D006887 ORTHO05D004325 2.9e-11 73.6 80 50.0
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 3.7e-11 73.2 87 48.3
AL3G31960 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 4.9e-11 72.8 210 29.0
CARHR157630 Cardamine hirsuta HOM05D006887 ORTHO05D004325 6.4e-11 72.4 173 32.4
BcaB06g25916 Brassica carinata HOM05D006887 ORTHO05D004325 8.3e-11 72.0 252 30.2
Thhalv10005313m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 8.3e-11 72.0 238 30.7
A04p13000 Brassica napus HOM05D006887 ORTHO05D004325 1.4e-10 71.2 152 36.8
C02p64040 Brassica napus HOM05D006887 ORTHO05D004325 1.4e-10 71.2 212 29.2
BolC2t12470H Brassica oleracea HOM05D006887 ORTHO05D004325 1.4e-10 71.2 212 29.2
CARHR283740 Cardamine hirsuta HOM05D006887 ORTHO05D004325 1.9e-10 70.9 244 29.1
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 2.4e-10 70.5 272 30.9
BcaC03g18328 Brassica carinata HOM05D006887 ORTHO05D004325 2.4e-10 70.5 212 29.2
BcaB06g27442 Brassica carinata HOM05D006887 ORTHO05D004325 3.2e-10 70.1 143 35.7
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 3.2e-10 70.1 87 46.0
C04p46390 Brassica napus HOM05D006887 ORTHO05D004325 3.2e-10 70.1 143 37.8
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 4.1e-10 69.7 140 37.1
BcaB06g27440 Brassica carinata HOM05D006887 ORTHO05D004325 4.1e-10 69.7 77 50.6
C04p46670 Brassica napus HOM05D006887 ORTHO05D004325 7.0e-10 68.9 105 41.9
C04p46750 Brassica napus HOM05D006887 ORTHO05D004325 1.2e-09 68.2 114 41.2
BolC4t26260H Brassica oleracea HOM05D006887 ORTHO05D004325 1.2e-09 68.2 120 40.8
BolC4t26262H Brassica oleracea HOM05D006887 ORTHO05D004325 1.2e-09 68.2 114 41.2
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-09 67.8 277 27.4
CARHR058360 Cardamine hirsuta HOM05D006887 ORTHO05D004325 2.0e-09 67.4 189 32.3
THA.LOC104801507 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.7e-09 67.0 101 45.5
BcaB06g27392 Brassica carinata HOM05D008478 ORTHO05D000740 3.5e-09 66.6 92 41.3
Carub.0008s2621 Capsella rubella HOM05D006887 ORTHO05D004325 7.8e-09 65.5 201 30.8
THA.LOC104804829 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 1.3e-08 64.7 176 31.2
CARHR262050 Cardamine hirsuta HOM05D006887 ORTHO05D004325 1.7e-08 64.3 59 54.2
BolC4t26255H Brassica oleracea HOM05D006887 ORTHO05D004325 2.3e-08 63.9 259 29.0
BolC6t35499H Brassica oleracea HOM05D007946 ORTHO05D004325 3.9e-08 63.2 112 41.1
THA.LOC109116042 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 6.6e-08 62.4 107 41.1
AT4G02235 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.3e-07 60.1 183 32.2
THA.LOC104805962 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.3e-07 59.7 143 32.2
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 5.6e-07 59.3 133 36.8
Sp2g28440 Schrenkiella parvula HOM05D006887 ORTHO05D004325 5.6e-07 59.3 222 29.3
THA.LOC109116041 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 9.5e-07 58.5 219 27.9
Aa31LG8G6660 Aethionema arabicum HOM05D006887 ORTHO05D004325 2.1e-06 57.4 103 36.9
THA.LOC104810872 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.1e-06 57.4 143 31.5
ATR0626G033 Amborella trichopoda HOM05D000307 ORTHO05D000166 4.7e-06 56.2 72 40.3
AT5G37415 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 4.7e-06 56.2 159 30.8


User provided reference genes

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