Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p23230 Brassica napus HOM05D001730 ORTHO05D021573 9.1e-54 213.4 113 100.0
BraA07t29987Z Brassica rapa HOM05D001730 ORTHO05D021573 2.6e-53 211.8 113 99.1
C08p32380 Brassica napus HOM05D001730 ORTHO05D005730 2.5e-27 125.6 113 71.7
BolC8t50852H Brassica oleracea HOM05D001730 ORTHO05D005730 2.5e-27 125.6 113 71.7
BcaB02g07623 Brassica carinata HOM05D001730 ORTHO05D005730 5.6e-27 124.4 113 70.8
A09p49970 Brassica napus HOM05D001730 ORTHO05D005730 5.6e-27 124.4 113 70.8
BraA09t40447Z Brassica rapa HOM05D001730 ORTHO05D005730 5.6e-27 124.4 113 70.8
Thhalv10005955m.g Eutrema salsugineum HOM05D001730 ORTHO05D005730 5.6e-27 124.4 122 67.2
AL5G38530 Arabidopsis lyrata HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
BcaB02g08332 Brassica carinata HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
BcaC02g09899 Brassica carinata HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
BcaC07g40051 Brassica carinata HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
A04p03780 Brassica napus HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
C04p35400 Brassica napus HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
BraA04t16056Z Brassica rapa HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
Sp5g05530 Schrenkiella parvula HOM05D001730 ORTHO05D005730 9.5e-27 123.6 113 70.8
AT3G57050 Arabidopsis thaliana HOM05D001730 ORTHO05D005730 2.8e-26 122.1 113 69.9
Aa31LG10G11970 Aethionema arabicum HOM05D001730 ORTHO05D005730 4.7e-26 121.3 113 69.0
THA.LOC104824410 Tarenaya hassleriana HOM05D001730 ORTHO05D005730 4.7e-26 121.3 113 69.9
CARHR167240 Cardamine hirsuta HOM05D001730 ORTHO05D005730 4.0e-25 118.2 113 69.0
Carub.0005s2385 Capsella rubella HOM05D001730 ORTHO05D005730 5.2e-25 117.9 113 68.1
BcaC07g40082 Brassica carinata HOM05D001730 ORTHO05D005730 6.4e-23 110.9 123 61.8
CiPaw.09G046100 Carya illinoinensis HOM05D001730 ORTHO05D005730 7.8e-21 104.0 112 59.8
QL07p008834 Quercus lobata HOM05D001730 ORTHO05D005730 7.8e-21 104.0 113 59.3
CANSAT64G2870 Cannabis sativa HOM05D001730 ORTHO05D005730 1.0e-20 103.6 113 61.9
Cfa020023 Carpinus fangiana HOM05D001730 ORTHO05D005730 1.0e-20 103.6 113 59.3
Psat6g070960 Pisum sativum HOM05D001730 ORTHO05D005730 1.0e-20 103.6 112 59.8
arahy.Tifrunner.gnm1.ann1.F5KNV4 Arachis hypogaea HOM05D004602 ORTHO05D005906 1.7e-20 102.8 113 59.3
CSS0010163 Camellia sinensis var. sinensis HOM05D001730 ORTHO05D005730 1.7e-20 102.8 95 65.3
MELO3C026534.2 Cucumis melo HOM05D001730 ORTHO05D005730 1.7e-20 102.8 119 55.5
CsaV3_6G031510 Cucumis sativus L. HOM05D001730 ORTHO05D005730 1.7e-20 102.8 119 55.5
Eucgr.A02261 Eucalyptus grandis HOM05D001730 ORTHO05D005730 1.7e-20 102.8 112 59.8
SalBow2G0687 Salvia bowleyana HOM05D001730 ORTHO05D021573 1.7e-20 102.8 95 63.2
SalBow2G1785 Salvia bowleyana HOM05D001730 ORTHO05D005730 1.7e-20 102.8 112 58.9
Cpa.g.sc5.210 Carica papaya HOM05D001730 ORTHO05D005730 2.3e-20 102.4 113 59.3
Nn2g14860 Nelumbo nucifera HOM05D001730 ORTHO05D005730 2.3e-20 102.4 112 58.9
PGR031G1759 Punica granatum HOM05D001730 ORTHO05D005730 2.3e-20 102.4 112 59.8
Sed0022611 Sechium edule HOM05D001730 ORTHO05D005730 2.3e-20 102.4 113 61.1
Sc13g0001250 Simmondsia chinensis HOM05D001730 ORTHO05D005730 2.3e-20 102.4 112 59.8
ClCG08G009380 Citrullus lanatus HOM05D001730 ORTHO05D005730 3.0e-20 102.1 119 55.5
Dinv34377 Davidia involucrata HOM05D001730 ORTHO05D005730 3.0e-20 102.1 112 58.0
Phvul.001G125400 Phaseolus vulgaris HOM05D001730 ORTHO05D005730 3.0e-20 102.1 113 59.3
RhsimUnG0220800 Rhododendron simsii HOM05D001730 ORTHO05D005730 3.0e-20 102.1 112 58.9
Ciclev10020055m.g Citrus clementina HOM05D001730 ORTHO05D005730 3.9e-20 101.7 113 59.3
Manes.09G007000 Manihot esculenta HOM05D001730 ORTHO05D005730 3.9e-20 101.7 113 60.2
arahy.Tifrunner.gnm1.ann1.0AC10P Arachis hypogaea HOM05D004602 ORTHO05D005906 5.0e-20 101.3 113 58.4
Cc06_g18900 Coffea canephora HOM05D001730 ORTHO05D005730 5.0e-20 101.3 103 60.2
Rhsim03G0042000 Rhododendron simsii HOM05D001730 ORTHO05D005730 5.0e-20 101.3 112 58.9
Hund24627 Selenicereus undatus HOM05D001730 ORTHO05D005730 5.0e-20 101.3 112 59.8
FAN16G3033 Fragaria x ananassa HOM05D001730 ORTHO05D005730 6.6e-20 100.9 113 57.5
PGR044G2076 Punica granatum HOM05D001730 ORTHO05D005730 6.6e-20 100.9 112 58.9
AUR62030340 Chenopodium quinoa HOM05D001730 ORTHO05D005730 1.1e-19 100.1 112 58.9
QL07p008853 Quercus lobata HOM05D001730 ORTHO05D005730 1.1e-19 100.1 113 57.5
Glyma.19G132000 Glycine max HOM05D001730 ORTHO05D005730 1.5e-19 99.8 92 64.1
PSO170G6374 Papaver somniferum HOM05D001730 ORTHO05D005730 1.5e-19 99.8 112 58.0
Potri.016G038200 Populus trichocarpa HOM05D001730 ORTHO05D005730 1.5e-19 99.8 112 58.0
Sabra16G0040100 Salix brachista HOM05D001730 ORTHO05D005730 1.5e-19 99.8 112 58.0
Sabra16G0044800 Salix brachista HOM05D001730 ORTHO05D005730 1.5e-19 99.8 112 58.0
TWI77G0683 Tripterygium wilfordii HOM05D001730 ORTHO05D005730 1.5e-19 99.8 112 57.1
PSO017G5717 Papaver somniferum HOM05D001730 ORTHO05D005730 1.9e-19 99.4 112 58.0
VMungo1383G2598 Vigna mungo HOM05D001730 ORTHO05D005730 1.9e-19 99.4 112 58.0
DCAR_013636 Daucus carota HOM05D001730 ORTHO05D005730 2.5e-19 99.0 113 57.5
Lalb_Chr20g0110151 Lupinus albus HOM05D001730 ORTHO05D005730 2.5e-19 99.0 112 58.0
Thecc.05G138900 Theobroma cacao HOM05D001730 ORTHO05D005730 2.5e-19 99.0 112 58.0
AUR62040828 Chenopodium quinoa HOM05D001730 ORTHO05D005730 3.3e-19 98.6 112 58.0
Glyma.03G129700 Glycine max HOM05D001730 ORTHO05D005730 3.3e-19 98.6 112 58.0
Gohir.A11G308100 Gossypium hirsutum HOM05D001730 ORTHO05D005730 3.3e-19 98.6 112 57.1
Lj2g0003873 Lotus japonicus HOM05D001730 ORTHO05D005730 3.3e-19 98.6 112 57.1
Os06g0175800 Oryza sativa ssp. japonica HOM05D001730 ORTHO05D005730 3.3e-19 98.6 112 56.2
Os06g0176900 Oryza sativa ssp. japonica HOM05D001730 ORTHO05D005730 3.3e-19 98.6 112 56.2
Gorai.007G353500 Gossypium raimondii HOM05D001730 ORTHO05D005730 4.3e-19 98.2 112 56.2
Lj1A1103T61 Lonicera japonica HOM05D001730 ORTHO05D005730 4.3e-19 98.2 93 63.4
TAR623G1659 Trochodendron aralioides HOM05D001730 ORTHO05D005730 4.3e-19 98.2 112 57.1
Zm00001eb375190 Zea mays HOM05D001730 ORTHO05D005730 4.3e-19 98.2 95 60.0
CDE06G0603 Ceratophyllum demersum HOM05D001730 ORTHO05D005730 5.6e-19 97.8 113 56.6
ECA236G4630 Erigeron canadensis HOM05D001730 ORTHO05D005730 5.6e-19 97.8 112 56.2
FvH4_3g30150 Fragaria vesca HOM05D001730 ORTHO05D005730 5.6e-19 97.8 112 56.2
FAN11G0160 Fragaria x ananassa HOM05D001730 ORTHO05D005730 5.6e-19 97.8 112 56.2
FAN21G0837 Fragaria x ananassa HOM05D001730 ORTHO05D005730 5.6e-19 97.8 112 56.2
Gohir.D11G323500 Gossypium hirsutum HOM05D001730 ORTHO05D005730 5.6e-19 97.8 112 56.2
Lsat_1_v5_gn_8_82641 Lactuca sativa HOM05D001730 ORTHO05D005730 5.6e-19 97.8 113 56.6
Medtr1g064320 Medicago truncatula HOM05D001730 ORTHO05D005730 5.6e-19 97.8 112 58.0
Atru.chr1.1491 Acer truncatum HOM05D001730 ORTHO05D005730 7.3e-19 97.4 113 56.6
Duzib093G2101 Durio zibethinus HOM05D001730 ORTHO05D005730 7.3e-19 97.4 112 57.1
Migut.K00129 Erythranthe guttata HOM05D001730 ORTHO05D005730 7.3e-19 97.4 112 56.2
HanXRQChr06g0176921 Helianthus annuus HOM05D001730 ORTHO05D005730 7.3e-19 97.4 113 58.4
EL10Ac3g07205 Beta vulgaris HOM05D001730 ORTHO05D005730 9.5e-19 97.1 112 57.1
MD12G1093700 Malus domestica HOM05D001730 ORTHO05D005730 9.5e-19 97.1 95 60.0
CAN.G641.73 Capsicum annuum HOM05D001730 ORTHO05D005730 1.2e-18 96.7 113 58.4
Lalb_Chr25g0286861 Lupinus albus HOM05D001730 ORTHO05D005730 1.6e-18 96.3 105 58.1
RcHm_v2.0_Chr2g0125281 Rosa chinensis HOM05D001730 ORTHO05D005730 1.6e-18 96.3 112 56.2
HPP92_013743 Vanilla planifolia HOM05D001730 ORTHO05D005730 1.6e-18 96.3 113 55.8
Manes.01G122300 Manihot esculenta HOM05D001730 ORTHO05D005730 2.1e-18 95.9 112 55.4
ATR1134G130 Amborella trichopoda HOM05D001730 ORTHO05D005730 2.8e-18 95.5 113 54.9
Aqoxy2G00352 Aquilegia oxysepala HOM05D001730 ORTHO05D005730 2.8e-18 95.5 112 56.2
COL.COLO4_05065 Corchorus olitorius HOM05D001730 ORTHO05D005730 2.8e-18 95.5 112 56.2
RhsimUnG0239200 Rhododendron simsii HOM05D001730 ORTHO05D005730 2.8e-18 95.5 95 64.2
Peaxi162Scf00970g00166 Petunia axillaris HOM05D001730 ORTHO05D005730 3.6e-18 95.1 112 56.2
GSVIVG01033607001 Vitis vinifera HOM05D001730 ORTHO05D005730 3.6e-18 95.1 112 56.2
Ah.04g151080 Amaranthus hybridus HOM05D004602 ORTHO05D005906 6.2e-18 94.4 112 56.2
Dinv05063 Davidia involucrata HOM05D001730 ORTHO05D005730 1.1e-17 93.6 95 60.0
SGA_v2.0_scaffold94G28527 Striga asiatica HOM05D001730 ORTHO05D005730 1.1e-17 93.6 112 55.4
Nitab4.5_0000571g0120 Nicotiana tabacum HOM05D001730 ORTHO05D005730 1.4e-17 93.2 113 56.6
Nitab4.5_0001364g0030 Nicotiana tabacum HOM05D001730 ORTHO05D005730 1.4e-17 93.2 113 56.6
PSO832G4537 Papaver somniferum HOM05D001730 ORTHO05D005730 1.4e-17 93.2 87 63.2
Solyc10g079720.2 Solanum lycopersicum HOM05D001730 ORTHO05D005730 1.4e-17 93.2 113 56.6
PGSC0003DMG400029836 Solanum tuberosum HOM05D001730 ORTHO05D005730 1.4e-17 93.2 113 56.6
PSO063G4026 Papaver somniferum HOM05D001730 ORTHO05D005730 1.8e-17 92.8 112 54.5
SEGI_02944 Sequoiadendron giganteum HOM05D001730 ORTHO05D005730 2.3e-17 92.4 109 55.0
Nn7g36657 Nelumbo nucifera HOM05D001730 ORTHO05D005730 3.1e-17 92.0 112 55.4
Oeu063773.2 Olea europaea HOM05D001730 ORTHO05D005730 3.1e-17 92.0 95 56.8
Peaxi162Scf00420g00564 Petunia axillaris HOM05D001730 ORTHO05D005730 3.1e-17 92.0 112 54.5
Peaxi162Scf01378g00122 Petunia axillaris HOM05D001730 ORTHO05D005730 3.1e-17 92.0 112 54.5
Pp3c5_1990 Physcomitrium patens HOM05D001730 ORTHO05D005730 3.1e-17 92.0 103 55.3
Migut.J01673 Erythranthe guttata HOM05D001730 ORTHO05D005730 4.0e-17 91.7 95 55.8
MBI16_g23860_MAGBIO Magnolia biondii HOM05D001730 ORTHO05D005730 4.0e-17 91.7 112 53.6
Mapoly0005s0149 Marchantia polymorpha HOM05D001730 ORTHO05D005730 4.0e-17 91.7 113 55.8
DCAR_020551 Daucus carota HOM05D001730 ORTHO05D005730 5.2e-17 91.3 109 55.0
Sopen10g030350 Solanum pennellii HOM05D001730 ORTHO05D005730 6.8e-17 90.9 98 60.2
PSO063G6072 Papaver somniferum HOM05D001730 ORTHO05D005730 8.9e-17 90.5 112 53.6
HanXRQChr01g0009311 Helianthus annuus HOM05D001730 ORTHO05D005730 1.2e-16 90.1 103 55.3
Nitab4.5_0002162g0100 Nicotiana tabacum HOM05D001730 ORTHO05D005730 1.5e-16 89.7 112 53.6
CBR_g45651 Chara braunii HOM05D001730 ORTHO05D005730 4.4e-16 88.2 104 53.8
Nitab4.5_0002208g0110 Nicotiana tabacum HOM05D001730 ORTHO05D005730 4.4e-16 88.2 112 52.7
ECA248G3688 Erigeron canadensis HOM05D001730 ORTHO05D005730 5.8e-16 87.8 113 54.0
SMO358G0226 Selaginella moellendorffii HOM05D001730 ORTHO05D005730 9.8e-16 87.0 103 54.4
C06p24110 Brassica napus HOM05D001730 ORTHO05D027964 2.4e-14 82.4 85 60.0
MCO10G385 Micromonas commoda HOM05D001730 ORTHO05D005730 4.1e-14 81.6 100 56.0
PRCOL_00006688 Prasinoderma coloniale HOM05D001730 ORTHO05D005730 1.2e-13 80.1 87 56.3
Cre16.g669550 Chlamydomonas reinhardtii HOM05D001730 ORTHO05D005730 1.7e-12 76.3 100 53.0
Rhsim03G0042100 Rhododendron simsii HOM05D001730 ORTHO05D021573 1.1e-09 67.0 48 79.2
Cfa024823 Carpinus fangiana HOM05D001730 ORTHO05D005730 2.3e-09 65.9 103 46.6
Rhsim03G0041800 Rhododendron simsii HOM05D001730 ORTHO05D005730 2.3e-09 65.9 108 44.4
TWI53G0748 Tripterygium wilfordii HOM05D001730 ORTHO05D005730 6.8e-09 64.3 48 72.9
CBR_g175 Chara braunii HOM05D001730 ORTHO05D005730 2.6e-08 62.4 103 42.7
CBR_g178 Chara braunii HOM05D001730 ORTHO05D005730 2.6e-08 62.4 103 42.7
CBR_g179 Chara braunii HOM05D001730 ORTHO05D005730 2.6e-08 62.4 103 42.7
CBR_g169 Chara braunii HOM05D001730 ORTHO05D005730 7.5e-08 60.8 101 43.6
CBR_g53946 Chara braunii HOM05D001730 ORTHO05D005730 7.5e-08 60.8 101 42.6
CBR_g168 Chara braunii HOM05D001730 ORTHO05D005730 9.9e-08 60.5 101 42.6
CBR_g34755 Chara braunii HOM05D001730 ORTHO05D005730 1.3e-07 60.1 111 41.4
CAN.G1174.4 Capsicum annuum HOM05D001017 ORTHO05D001025 2.4e-06 55.8 80 47.5


User provided reference genes

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