Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p34740 Brassica napus HOM05D003241 ORTHO05D003812 6.6e-117 424.1 219 100.0
BraA05t22289Z Brassica rapa HOM05D003241 ORTHO05D003812 1.3e-104 383.3 219 93.2
BcaB06g25362 Brassica carinata HOM05D003241 ORTHO05D003812 7.1e-79 297.7 213 77.9
BcaC05g29043 Brassica carinata HOM05D003241 ORTHO05D003812 3.9e-69 265.4 207 74.4
Thhalv10022422m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 1.6e-62 243.4 219 68.5
AL3G27010 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 2.4e-58 229.6 213 68.1
AT3G14700 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 5.9e-57 224.9 220 63.6
C05p52560 Brassica napus HOM05D003241 ORTHO05D003812 3.3e-52 209.1 115 93.9
Carub.0003s1438 Capsella rubella HOM05D003241 ORTHO05D003812 3.9e-37 159.1 224 50.9
Duzib213G0093 Durio zibethinus HOM05D003241 ORTHO05D003812 5.3e-26 122.1 146 52.1
Gohir.A04G045600 Gossypium hirsutum HOM05D003241 ORTHO05D003812 1.6e-25 120.6 146 51.4
Gohir.D05G337200 Gossypium hirsutum HOM05D003241 ORTHO05D003812 1.6e-25 120.6 146 51.4
Gorai.009G361400 Gossypium raimondii HOM05D003241 ORTHO05D003812 1.6e-25 120.6 146 51.4
AL6G27800 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 2.7e-25 119.8 143 49.7
CARHR196380 Cardamine hirsuta HOM05D003241 ORTHO05D003812 2.7e-25 119.8 154 48.1
AT5G16780 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 4.5e-25 119.0 146 49.3
Potri.001G082100 Populus trichocarpa HOM05D003241 ORTHO05D003812 7.7e-25 118.2 156 49.4
Duzib268G1256 Durio zibethinus HOM05D003241 ORTHO05D003812 1.0e-24 117.9 191 45.5
CiPaw.02G097400 Carya illinoinensis HOM05D003241 ORTHO05D003812 3.8e-24 115.9 149 50.3
Aa31LG8G1930 Aethionema arabicum HOM05D003241 ORTHO05D000015 5.0e-24 115.5 161 46.6
Carub.0006s1500 Capsella rubella HOM05D003241 ORTHO05D003812 6.5e-24 115.2 143 48.3
Cpa.g.sc115.47 Carica papaya HOM05D003241 ORTHO05D003812 8.5e-24 114.8 202 42.1
Lj3g0022607 Lotus japonicus HOM05D003241 ORTHO05D003812 1.1e-23 114.4 197 43.7
Aa31LG11G12850 Aethionema arabicum HOM05D003241 ORTHO05D003812 1.5e-23 114.0 143 47.6
COL.COLO4_13873 Corchorus olitorius HOM05D003241 ORTHO05D003812 1.5e-23 114.0 204 42.2
Cfa015650 Carpinus fangiana HOM05D003241 ORTHO05D003812 1.9e-23 113.6 157 48.4
Thhalv10012684m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 1.9e-23 113.6 144 49.3
Lalb_Chr03g0032261 Lupinus albus HOM05D003241 ORTHO05D003812 2.5e-23 113.2 146 50.7
Lalb_Chr19g0130441 Lupinus albus HOM05D003241 ORTHO05D003812 2.5e-23 113.2 146 50.7
Ciclev10000233m.g Citrus clementina HOM05D003241 ORTHO05D003812 3.2e-23 112.8 146 49.3
Manes.16G074400 Manihot esculenta HOM05D003241 ORTHO05D003812 3.2e-23 112.8 186 43.5
Ca_13374_v3 Cicer arietinum L. HOM05D003241 ORTHO05D003812 4.2e-23 112.5 197 43.1
Haze_00894 Corylus avellana HOM05D003241 ORTHO05D003812 4.2e-23 112.5 149 49.7
Solyc11g008470.2 Solanum lycopersicum HOM05D003241 ORTHO05D003812 5.5e-23 112.1 138 49.3
Sopen11g004250 Solanum pennellii HOM05D003241 ORTHO05D003812 5.5e-23 112.1 138 49.3
TWI32G0731 Tripterygium wilfordii HOM05D003241 ORTHO05D003812 5.5e-23 112.1 146 47.9
BcaC04g18848 Brassica carinata HOM05D003241 ORTHO05D003812 7.2e-23 111.7 143 47.6
BcaC04g18849 Brassica carinata HOM05D003241 ORTHO05D003812 7.2e-23 111.7 143 47.6
A10p22440 Brassica napus HOM05D003241 ORTHO05D003812 7.2e-23 111.7 143 47.6
C09p60290 Brassica napus HOM05D003241 ORTHO05D003812 7.2e-23 111.7 143 47.6
BolC9t58862H Brassica oleracea HOM05D003241 ORTHO05D003812 7.2e-23 111.7 143 47.6
BraA10t44303Z Brassica rapa HOM05D003241 ORTHO05D003812 7.2e-23 111.7 143 47.6
COL.COLO4_17461 Corchorus olitorius HOM05D003241 ORTHO05D003812 7.2e-23 111.7 151 49.0
TAR381G1550 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.2e-22 110.9 171 43.3
Nitab4.5_0004325g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 1.6e-22 110.5 138 49.3
ATR1098G045 Amborella trichopoda HOM05D003241 ORTHO05D003812 2.1e-22 110.2 166 45.8
PGSC0003DMG400007426 Solanum tuberosum HOM05D003241 ORTHO05D003812 2.1e-22 110.2 138 48.6
GSVIVG01035173001 Vitis vinifera HOM05D003241 ORTHO05D003812 2.1e-22 110.2 146 50.0
Nitab4.5_0004385g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 2.7e-22 109.8 138 49.3
Glyma.07G220800 Glycine max HOM05D003241 ORTHO05D003812 3.6e-22 109.4 187 43.9
arahy.Tifrunner.gnm1.ann1.2W1DSR Arachis hypogaea HOM05D003241 ORTHO05D003812 4.7e-22 109.0 188 44.1
arahy.Tifrunner.gnm1.ann1.61N80Q Arachis hypogaea HOM05D003241 ORTHO05D003812 4.7e-22 109.0 188 44.1
Glyma.08G229600 Glycine max HOM05D003241 ORTHO05D003812 4.7e-22 109.0 160 46.9
TAR571G0002 Trochodendron aralioides HOM05D003241 ORTHO05D003812 4.7e-22 109.0 171 42.7
TAR625G1302 Trochodendron aralioides HOM05D003241 ORTHO05D003812 4.7e-22 109.0 171 42.7
MELO3C022204.2 Cucumis melo HOM05D003241 ORTHO05D003812 8.0e-22 108.2 190 38.4
SEGI_01763 Sequoiadendron giganteum HOM05D003241 ORTHO05D003812 1.0e-21 107.8 188 39.4
CAN.G321.38 Capsicum annuum HOM05D003241 ORTHO05D003812 1.4e-21 107.5 138 47.8
QL06p002249 Quercus lobata HOM05D003241 ORTHO05D003812 1.4e-21 107.5 191 41.9
QL06p002393 Quercus lobata HOM05D003241 ORTHO05D003812 1.4e-21 107.5 191 41.9
Rhsim01G0112900 Rhododendron simsii HOM05D003241 ORTHO05D003812 1.8e-21 107.1 151 45.0
HPP92_003413 Vanilla planifolia HOM05D003241 ORTHO05D008621 1.8e-21 107.1 152 46.7
CsaV3_5G040300 Cucumis sativus L. HOM05D003241 ORTHO05D003812 2.3e-21 106.7 191 39.3
Eucgr.J03092 Eucalyptus grandis HOM05D003241 ORTHO05D003812 3.0e-21 106.3 146 47.3
Nn5g27739 Nelumbo nucifera HOM05D003241 ORTHO05D003812 3.0e-21 106.3 204 40.2
ClCG08G000490 Citrullus lanatus HOM05D003241 ORTHO05D003812 5.2e-21 105.5 191 38.7
Phvul.011G184800 Phaseolus vulgaris HOM05D003241 ORTHO05D003812 5.2e-21 105.5 185 41.1
PGR031G3475 Punica granatum HOM05D003241 ORTHO05D003812 6.8e-21 105.1 157 43.3
Sed0020388 Sechium edule HOM05D003241 ORTHO05D003812 6.8e-21 105.1 151 43.7
AagrBONN_evm.TU.Sc2ySwM_344.1153__1154 Anthoceros agrestis HOM05D003241 ORTHO05D003812 1.5e-20 104.0 141 47.5
Psat6g151960 Pisum sativum HOM05D003241 ORTHO05D003812 2.6e-20 103.2 183 42.6
Hund17599 Selenicereus undatus HOM05D003241 ORTHO05D003812 3.4e-20 102.8 165 41.2
TPR.G2613 Trifolium pratense HOM05D003241 ORTHO05D003812 3.4e-20 102.8 197 41.1
Zm00001eb140630 Zea mays HOM05D003241 ORTHO05D003812 3.4e-20 102.8 134 47.0
Atru.chr4.2711 Acer truncatum HOM05D003241 ORTHO05D003812 4.4e-20 102.4 206 39.3
MBI18_g28212_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 5.7e-20 102.1 189 40.7
Medtr1g083910 Medicago truncatula HOM05D003241 ORTHO05D003812 5.7e-20 102.1 166 45.8
Os02g0511500 Oryza sativa ssp. japonica HOM05D003241 ORTHO05D003812 9.8e-20 101.3 134 47.0
EL10Ac6g15598 Beta vulgaris HOM05D003241 ORTHO05D003812 1.3e-19 100.9 208 38.5
AUR62018246 Chenopodium quinoa HOM05D003241 ORTHO05D003812 1.3e-19 100.9 199 36.7
Oeu058578.1 Olea europaea HOM05D003241 ORTHO05D003812 1.3e-19 100.9 193 37.8
Lj2C819G2 Lonicera japonica HOM05D003241 ORTHO05D003812 1.7e-19 100.5 154 42.9
DCAR_019828 Daucus carota HOM05D003241 ORTHO05D003812 2.2e-19 100.1 201 40.3
Lsat_1_v5_gn_1_54260 Lactuca sativa HOM05D003241 ORTHO05D003812 2.2e-19 100.1 160 40.0
vmacro13976 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 2.2e-19 100.1 228 35.5
Thecc.07G135300 Theobroma cacao HOM05D003241 ORTHO05D003812 2.8e-19 99.8 165 44.2
AUR62034840 Chenopodium quinoa HOM05D003241 ORTHO05D003812 3.7e-19 99.4 199 36.2
Dinv09319 Davidia involucrata HOM05D003241 ORTHO05D003812 3.7e-19 99.4 194 39.2
FvH4_4g15641 Fragaria vesca HOM05D003241 ORTHO05D003812 3.7e-19 99.4 170 40.6
FAN12G3728 Fragaria x ananassa HOM05D003241 ORTHO05D003812 3.7e-19 99.4 170 40.6
FAN17G1371 Fragaria x ananassa HOM05D003241 ORTHO05D003812 3.7e-19 99.4 170 40.6
Mapoly0063s0006 Marchantia polymorpha HOM05D003241 ORTHO05D003812 3.7e-19 99.4 139 46.0
Sp3g12930 Schrenkiella parvula HOM05D003241 ORTHO05D003812 3.7e-19 99.4 167 46.1
Actinidia29972 Actinidia chinensis HOM05D003241 ORTHO05D003812 4.8e-19 99.0 146 45.2
FAN27G2894 Fragaria x ananassa HOM05D003241 ORTHO05D003812 4.8e-19 99.0 170 40.6
HanXRQChr09g0244631 Helianthus annuus HOM05D003241 ORTHO05D003812 4.8e-19 99.0 140 42.9
unitig_749.g14191 Utricularia gibba HOM05D003241 ORTHO05D003812 4.8e-19 99.0 183 37.2
unitig_77.g31483 Utricularia gibba HOM05D003241 ORTHO05D003812 4.8e-19 99.0 183 37.2
Dinv19008 Davidia involucrata HOM05D003241 ORTHO05D003812 6.3e-19 98.6 199 38.7
FAN20G2531 Fragaria x ananassa HOM05D003241 ORTHO05D003812 6.3e-19 98.6 171 40.4
vmacro19775 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 8.3e-19 98.2 151 44.4
CBR_g32002 Chara braunii HOM05D003241 ORTHO05D003812 1.1e-18 97.8 138 44.2
MD13G1193700 Malus domestica HOM05D003241 ORTHO05D003812 1.1e-18 97.8 174 41.4
Oeu011820.1 Olea europaea HOM05D003241 ORTHO05D003812 1.1e-18 97.8 194 37.1
RcHm_v2.0_Chr7g0234901 Rosa chinensis HOM05D003241 ORTHO05D003812 1.1e-18 97.8 185 36.2
Migut.J00827 Erythranthe guttata HOM05D003241 ORTHO05D003812 1.4e-18 97.4 146 42.5
FAN15G1779 Fragaria x ananassa HOM05D003241 ORTHO05D003812 1.4e-18 97.4 184 38.6
SGA_v2.0_scaffold31G12724 Striga asiatica HOM05D003241 ORTHO05D003812 1.4e-18 97.4 182 37.4
QL09p049212 Quercus lobata HOM05D003241 ORTHO05D003812 2.4e-18 96.7 158 41.8
RcHm_v2.0_Chr4g0416151 Rosa chinensis HOM05D003241 ORTHO05D003812 2.4e-18 96.7 170 42.4
SMO361G0171 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 2.4e-18 96.7 207 36.2
Prupe.1G014100 Prunus persica HOM05D003241 ORTHO05D003812 3.1e-18 96.3 172 40.7
vmacro19776 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 3.1e-18 96.3 150 42.7
Aqoxy4G03221 Aquilegia oxysepala HOM05D003241 ORTHO05D003812 5.4e-18 95.5 190 38.4
Pp3c15_10170 Physcomitrium patens HOM05D003241 ORTHO05D003812 5.4e-18 95.5 141 42.6
RcHm_v2.0_Chr4g0416161 Rosa chinensis HOM05D003241 ORTHO05D003812 5.4e-18 95.5 170 42.4
BolC5t33936H Brassica oleracea HOM05D003241 ORTHO05D003812 9.1e-18 94.7 60 85.0
SalBow3G1087 Salvia bowleyana HOM05D003241 ORTHO05D003812 1.2e-17 94.4 187 39.0
ECA248G0833 Erigeron canadensis HOM05D003241 ORTHO05D003812 4.5e-17 92.4 225 32.9
MD16G1194300 Malus domestica HOM05D003241 ORTHO05D003812 7.7e-17 91.7 175 40.0
Peaxi162Scf00296g00721 Petunia axillaris HOM05D003241 ORTHO05D003812 1.0e-16 91.3 146 43.2
Medtr1g032020 Medicago truncatula HOM05D003241 ORTHO05D003812 2.2e-16 90.1 179 39.7
Medtr1g032350 Medicago truncatula HOM05D003241 ORTHO05D003812 2.2e-16 90.1 179 39.7
Atru.chr1.2009 Acer truncatum HOM05D003241 ORTHO05D003812 2.5e-15 86.7 127 41.7
Eucgr.L01432 Eucalyptus grandis HOM05D003241 ORTHO05D003812 4.2e-15 85.9 108 49.1
AagrBONN_evm.TU.Sc2ySwM_117.3043 Anthoceros agrestis HOM05D003241 ORTHO05D003812 9.5e-15 84.7 141 43.3
PGSC0003DMG400024746 Solanum tuberosum HOM05D003241 ORTHO05D003812 9.5e-15 84.7 137 38.7
ECA248G0244 Erigeron canadensis HOM05D003241 ORTHO05D003812 1.2e-14 84.3 225 30.7
Lj6g0011042 Lotus japonicus HOM05D003241 ORTHO05D003812 6.1e-14 82.0 171 38.6
Nitab4.5_0002344g0060 Nicotiana tabacum HOM05D003241 ORTHO05D003812 3.0e-13 79.7 107 46.7
Sopen01g042940 Solanum pennellii HOM05D003241 ORTHO05D003812 3.0e-13 79.7 131 40.5
Nitab4.5_0014335g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 4.0e-13 79.3 105 49.5
Actinidia21372 Actinidia chinensis HOM05D003241 ORTHO05D003812 6.8e-13 78.6 141 43.3
PSO013G0353 Papaver somniferum HOM05D003241 ORTHO05D003812 6.8e-13 78.6 147 39.5
PSO339G1389 Papaver somniferum HOM05D003241 ORTHO05D003812 6.8e-13 78.6 147 39.5
PRCOL_00003741 Prasinoderma coloniale HOM05D003241 ORTHO05D003812 8.8e-13 78.2 129 35.7
Solyc01g099380.4 Solanum lycopersicum HOM05D003241 ORTHO05D003812 8.8e-13 78.2 131 40.5
PSO063G3239 Papaver somniferum HOM05D003241 ORTHO05D003812 1.2e-12 77.8 167 35.9
PSO339G6261 Papaver somniferum HOM05D003241 ORTHO05D003812 1.2e-12 77.8 145 39.3
Lj2A813G14 Lonicera japonica HOM05D003241 ORTHO05D003812 1.5e-12 77.4 157 36.9
MD07G1289000 Malus domestica HOM05D003241 ORTHO05D003812 2.0e-12 77.0 126 40.5
Peaxi162Scf00067g00244 Petunia axillaris HOM05D003241 ORTHO05D003812 2.8e-11 73.2 111 44.1
MCO08G320 Micromonas commoda HOM05D003241 ORTHO05D003812 4.9e-11 72.4 143 35.0
Migut.N01793 Erythranthe guttata HOM05D003241 ORTHO05D003812 8.3e-11 71.6 136 38.2
SMO111G0075 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 1.1e-10 71.2 124 38.7
Rhsim06G0183100 Rhododendron simsii HOM05D003241 ORTHO05D003812 3.1e-10 69.7 95 44.2
Actinidia16705 Actinidia chinensis HOM05D003241 ORTHO05D003812 4.1e-10 69.3 97 47.4
Lju445A0T13 Lonicera japonica HOM05D003241 ORTHO05D003812 9.2e-10 68.2 84 45.2
Rhsim06G0182100 Rhododendron simsii HOM05D003241 ORTHO05D003812 1.6e-09 67.4 95 43.2
AagrBONN_evm.TU.Sc2ySwM_117.3514 Anthoceros agrestis HOM05D003241 ORTHO05D003812 2.0e-09 67.0 99 45.5
SMO351G0236 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 4.5e-09 65.9 126 37.3
CDE03G0251 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 1.0e-08 64.7 74 50.0
SMO111G0085 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 6.6e-08 62.0 126 34.9
Eucgr.L02270 Eucalyptus grandis HOM05D001083 ORTHO05D003812 1.1e-07 61.2 94 43.6
Haze_08784 Corylus avellana HOM05D003241 ORTHO05D003812 2.5e-07 60.1 50 62.0
Cre03.g156100 Chlamydomonas reinhardtii HOM05D003241 ORTHO05D003812 4.3e-07 59.3 158 34.2
CSS0028609 Camellia sinensis var. sinensis HOM05D003241 ORTHO05D003812 7.3e-07 58.5 86 46.5


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