Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p53270 Brassica napus HOM05D001487 ORTHO05D001365 3.0e-87 325.1 157 100.0
BcaC04g19949 Brassica carinata HOM05D001487 ORTHO05D001365 9.3e-65 250.4 186 68.3
C07p51570 Brassica napus HOM05D001487 ORTHO05D001365 2.8e-53 212.2 147 76.2
BcaNung00814 Brassica carinata HOM05D001487 ORTHO05D001365 5.3e-52 208.0 147 74.8
BraA03t14387Z Brassica rapa HOM05D001487 ORTHO05D001365 2.2e-50 202.6 188 60.1
Thhalv10028141m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 4.4e-46 188.3 189 54.0
CARHR061980 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.8e-45 184.9 173 57.8
AT1G69090 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 3.3e-38 162.2 188 49.5
BcaNung01709 Brassica carinata HOM05D001487 ORTHO05D001365 3.3e-38 162.2 186 49.5
BcaNung01706 Brassica carinata HOM05D001487 ORTHO05D001365 3.1e-36 155.6 106 74.5
BraA03t14395Z Brassica rapa HOM05D001487 ORTHO05D001365 4.1e-36 155.2 76 98.7
A03p53240 Brassica napus HOM05D001487 ORTHO05D001365 7.0e-36 154.5 185 49.2
AT5G66830 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.0e-35 152.9 189 47.1
BraA03t14393Z Brassica rapa HOM05D001487 ORTHO05D001365 3.5e-35 152.1 107 73.8
CARHR062010 Cardamine hirsuta HOM05D001487 ORTHO05D001365 5.9e-35 151.4 191 48.2
Carub.0004s0068 Capsella rubella HOM05D001487 ORTHO05D001365 6.5e-34 147.9 191 45.5
C07p51560 Brassica napus HOM05D001487 ORTHO05D001365 8.5e-34 147.5 185 47.0
BcaNung01710 Brassica carinata HOM05D001487 ORTHO05D001365 2.5e-33 146.0 188 47.3
Carub.0007s3024 Capsella rubella HOM05D001487 ORTHO05D001365 3.6e-32 142.1 180 45.6
C08p53010 Brassica napus HOM05D001487 ORTHO05D001365 6.7e-31 137.9 188 45.2
BolC8t52813H Brassica oleracea HOM05D001487 ORTHO05D001365 8.8e-31 137.5 188 45.2
BcaNung00818 Brassica carinata HOM05D001487 ORTHO05D001365 5.7e-30 134.8 180 46.7
BraA03t14390Z Brassica rapa HOM05D001487 ORTHO05D001365 9.7e-30 134.0 186 45.2
C08p52970 Brassica napus HOM05D001487 ORTHO05D001365 1.3e-29 133.7 188 44.7
BcaNung00815 Brassica carinata HOM05D001487 ORTHO05D001365 2.4e-28 129.4 163 49.1
Carub.0007s1930 Capsella rubella HOM05D001487 ORTHO05D001365 2.4e-28 129.4 184 39.1
A09p68400 Brassica napus HOM05D001487 ORTHO05D001365 4.1e-28 128.6 185 44.3
BraA09t42176Z Brassica rapa HOM05D001487 ORTHO05D001365 4.1e-28 128.6 185 44.3
CARHR072250 Cardamine hirsuta HOM05D001487 ORTHO05D001365 9.1e-28 127.5 186 42.5
AT4G22060 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.7e-27 125.9 185 41.1
A02p04530 Brassica napus HOM05D001487 ORTHO05D001365 4.5e-27 125.2 180 42.2
BraA02t05414Z Brassica rapa HOM05D001487 ORTHO05D001365 4.5e-27 125.2 180 42.2
Carub.0007s1915 Capsella rubella HOM05D001487 ORTHO05D001365 1.7e-26 123.2 181 41.4
BcaB01g05408 Brassica carinata HOM05D001487 ORTHO05D001365 1.5e-25 120.2 186 39.2
BcaNung00808 Brassica carinata HOM05D001487 ORTHO05D001365 1.5e-25 120.2 179 41.3
BcaB01g05407 Brassica carinata HOM05D001487 ORTHO05D001365 1.9e-25 119.8 186 39.2
A03p53200 Brassica napus HOM05D001487 ORTHO05D001365 2.5e-25 119.4 126 52.4
BcaB01g05409 Brassica carinata HOM05D001487 ORTHO05D001365 3.2e-25 119.0 186 39.2
BcaB01g05410 Brassica carinata HOM05D001487 ORTHO05D001365 4.2e-25 118.6 186 39.2
A03p05550 Brassica napus HOM05D001487 ORTHO05D001365 5.5e-25 118.2 186 38.7
BraA03t09894Z Brassica rapa HOM05D001487 ORTHO05D001365 5.5e-25 118.2 186 38.7
Carub.0007s1928 Capsella rubella HOM05D001487 ORTHO05D001365 7.2e-25 117.9 182 40.7
C03p34190 Brassica napus HOM05D001487 ORTHO05D001365 9.4e-25 117.5 171 40.9
A03p53350 Brassica napus HOM05D001487 ORTHO05D001365 1.6e-24 116.7 179 42.5
BraA03t14399Z Brassica rapa HOM05D001487 ORTHO05D001365 1.6e-24 116.7 179 41.3
AL7G31490 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.6e-24 115.5 179 41.9
BraA01t01294Z Brassica rapa HOM05D001487 ORTHO05D001365 3.6e-24 115.5 177 40.1
Thhalv10025429m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.6e-24 115.5 182 40.1
A01p13530 Brassica napus HOM05D001487 ORTHO05D001365 4.7e-24 115.2 177 40.1
BraA03t09892Z Brassica rapa HOM05D001487 ORTHO05D001365 4.7e-24 115.2 193 38.9
Thhalv10027492m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 4.7e-24 115.2 182 39.6
BolC3t15728H Brassica oleracea HOM05D001487 ORTHO05D001365 6.1e-24 114.8 180 40.6
BolC3t13163H Brassica oleracea HOM05D001487 ORTHO05D001365 8.0e-24 114.4 186 39.2
BcaC01g04751 Brassica carinata HOM05D001487 ORTHO05D001365 1.8e-23 113.2 180 40.6
A03p05530 Brassica napus HOM05D001487 ORTHO05D001365 1.8e-23 113.2 193 38.3
Carub.0001s3411 Capsella rubella HOM05D001487 ORTHO05D001365 1.8e-23 113.2 155 43.9
AT4G22165 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 3.0e-23 112.5 157 42.0
C03p06480 Brassica napus HOM05D001487 ORTHO05D001365 4.0e-23 112.1 193 37.8
C03p06520 Brassica napus HOM05D001487 ORTHO05D001365 8.8e-23 110.9 193 37.8
AL7G31480 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.5e-22 110.2 182 40.7
BolC3t13152H Brassica oleracea HOM05D001487 ORTHO05D001365 2.0e-22 109.8 193 37.8
BraA03t12034Z Brassica rapa HOM05D001487 ORTHO05D001365 2.6e-22 109.4 181 38.7
Carub.0007s2121 Capsella rubella HOM05D001487 ORTHO05D001365 3.4e-22 109.0 190 37.9
AT4G22180 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.7e-22 108.2 183 38.3
AT4G22660 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.3e-21 107.1 185 38.9
BcaC01g00756 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-21 106.7 184 39.1
BcaNung03757 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-21 106.7 175 37.1
A08p15560 Brassica napus HOM05D001487 ORTHO05D001365 3.7e-21 105.5 184 38.6
BraA08t33536Z Brassica rapa HOM05D001487 ORTHO05D001365 3.7e-21 105.5 184 38.6
Carub.0008s0080 Capsella rubella HOM05D001487 ORTHO05D001365 3.7e-21 105.5 180 38.9
AL7G30780 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 8.3e-21 104.4 168 39.9
Carub.0007s1914 Capsella rubella HOM05D001487 ORTHO05D001365 1.4e-20 103.6 183 38.3
AT4G22170 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.8e-20 103.2 162 40.7
BcaB01g02842 Brassica carinata HOM05D001487 ORTHO05D001365 1.8e-20 103.2 172 39.0
CARHR229030 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.4e-20 102.8 166 40.4
Thhalv10013780m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.1e-20 102.4 178 40.4
A01p24100 Brassica napus HOM05D001487 ORTHO05D001365 7.0e-20 101.3 190 37.9
BraA01t02323Z Brassica rapa HOM05D001487 ORTHO05D001365 7.0e-20 101.3 190 37.9
AL7G31500 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 9.1e-20 100.9 167 39.5
Carub.0007s3493 Capsella rubella HOM05D001487 ORTHO05D001365 9.1e-20 100.9 192 40.1
BcaB05g25248 Brassica carinata HOM05D001487 ORTHO05D001365 3.5e-19 99.0 184 35.9
AT4G14165 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 4.5e-19 98.6 174 37.9
AL1G60840 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 5.9e-19 98.2 173 39.9
BraA06t27782Z Brassica rapa HOM05D001487 ORTHO05D001365 5.9e-19 98.2 186 36.6
C07p51640 Brassica napus HOM05D001487 ORTHO05D001365 7.7e-19 97.8 174 37.9
Thhalv10009751m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 7.7e-19 97.8 172 39.5
Thhalv10026894m.g Eutrema salsugineum HOM05D001110 ORTHO05D000942 1.0e-18 97.4 183 35.5
BcaNung01712 Brassica carinata HOM05D001487 ORTHO05D001365 1.3e-18 97.1 104 57.7
CARHR229040 Cardamine hirsuta HOM05D001487 ORTHO05D001365 3.8e-18 95.5 175 38.3
CARHR283650 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.5e-18 94.7 158 40.5
Carub.0007s1850 Capsella rubella HOM05D001487 ORTHO05D001365 1.5e-17 93.6 177 36.2
Thhalv10026778m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.9e-17 93.2 153 37.3
CARHR199170 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.2e-17 92.0 184 33.7
CARHR061990 Cardamine hirsuta HOM05D001487 ORTHO05D001365 9.5e-17 90.9 68 66.2
BcaB02g09869 Brassica carinata HOM05D001487 ORTHO05D001365 1.6e-16 90.1 181 37.0
BraA01t01297Z Brassica rapa HOM05D001487 ORTHO05D001365 1.6e-16 90.1 169 39.1
A01p13550 Brassica napus HOM05D001487 ORTHO05D001365 2.1e-16 89.7 169 38.5
Carub.0001s4156 Capsella rubella HOM05D001487 ORTHO05D001365 2.1e-16 89.7 188 35.1
C03p06460 Brassica napus HOM05D001487 ORTHO05D001365 2.8e-16 89.4 130 42.3
AL6G24840 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.6e-16 89.0 159 34.6
A09p39270 Brassica napus HOM05D001487 ORTHO05D001365 4.7e-16 88.6 124 41.9
Carub.0003s0112 Capsella rubella HOM05D001487 ORTHO05D001365 4.7e-16 88.6 150 35.3
AL8G44570 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 6.1e-16 88.2 90 52.2
CARHR228860 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.1e-16 88.2 97 50.5
BcaC09g47801 Brassica carinata HOM05D001487 ORTHO05D001365 1.0e-15 87.4 145 38.6
BcaNung00809 Brassica carinata HOM05D001487 ORTHO05D001365 1.0e-15 87.4 148 40.5
A02p29050 Brassica napus HOM05D001487 ORTHO05D001365 1.0e-15 87.4 123 41.5
BolC1t05751H Brassica oleracea HOM05D001487 ORTHO05D001365 1.0e-15 87.4 145 38.6
BcaC09g47807 Brassica carinata HOM05D001487 ORTHO05D001365 1.4e-15 87.0 170 37.6
Thhalv10015550m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.4e-15 87.0 152 36.8
AL7G31470 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.8e-15 86.7 160 38.8
BolC3t13870H Brassica oleracea HOM05D001487 ORTHO05D001365 1.8e-15 86.7 188 35.6
CARHR229730 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.8e-15 86.7 190 37.4
BcaB05g23284 Brassica carinata HOM05D001487 ORTHO05D001365 5.2e-15 85.1 140 40.7
BcaC01g06628 Brassica carinata HOM05D001487 ORTHO05D001365 5.2e-15 85.1 193 36.8
BolC3t13871H Brassica oleracea HOM05D001487 ORTHO05D001365 5.2e-15 85.1 118 45.8
AT4G17565 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.0e-14 83.2 178 31.5
CARHR052960 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.6e-14 82.8 97 45.4
BcaB01g04509 Brassica carinata HOM05D001487 ORTHO05D001365 3.4e-14 82.4 188 36.7
AL3G11210 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 4.4e-14 82.0 158 34.2
A03p12160 Brassica napus HOM05D001487 ORTHO05D001365 4.4e-14 82.0 119 43.7
BcaC09g51630 Brassica carinata HOM05D001487 ORTHO05D001365 5.7e-14 81.6 174 36.2
Carub.0006s1237 Capsella rubella HOM05D001487 ORTHO05D001365 9.8e-14 80.9 125 36.0
AT2G05970 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.3e-13 80.5 127 39.4
Thhalv10027445m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.3e-13 80.5 175 32.6
AL7G37040 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.7e-13 80.1 171 31.0
CARHR076060 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.7e-13 80.1 150 38.0
BraA01t00906Z Brassica rapa HOM05D001487 ORTHO05D001365 2.2e-13 79.7 176 34.1
Sp3g24140 Schrenkiella parvula HOM05D001487 ORTHO05D001365 2.2e-13 79.7 120 41.7
CARHR229010 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.8e-13 79.3 166 38.0
BcaB01g04511 Brassica carinata HOM05D001487 ORTHO05D001365 3.7e-13 79.0 117 43.6
BcaB01g04516 Brassica carinata HOM05D001487 ORTHO05D001365 3.7e-13 79.0 117 43.6
BcaC09g51154 Brassica carinata HOM05D001487 ORTHO05D001365 6.3e-13 78.2 152 38.2
BolC1t01589H Brassica oleracea HOM05D001487 ORTHO05D001365 1.4e-12 77.0 141 37.6
Carub.0002s2025 Capsella rubella HOM05D001487 ORTHO05D001365 1.4e-12 77.0 122 40.2
BcaC01g06632 Brassica carinata HOM05D001487 ORTHO05D001365 3.1e-12 75.9 115 43.5
BcaB01g04515 Brassica carinata HOM05D001487 ORTHO05D001365 1.2e-11 73.9 71 52.1
BcaC03g13551 Brassica carinata HOM05D001487 ORTHO05D001365 1.2e-11 73.9 184 32.1
AT5G14160 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.0e-11 73.2 120 36.7
Thhalv10013894m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 2.7e-11 72.8 170 32.9
BcaC03g18566 Brassica carinata HOM05D001487 ORTHO05D001365 3.5e-11 72.4 152 33.6
C02p13880 Brassica napus HOM05D001487 ORTHO05D001365 3.5e-11 72.4 152 33.6
BolC2t07507H Brassica oleracea HOM05D001487 ORTHO05D001365 3.5e-11 72.4 152 33.6
C01p11210 Brassica napus HOM05D001487 ORTHO05D001365 5.9e-11 71.6 96 42.7
CARHR229570 Cardamine hirsuta HOM05D001487 ORTHO05D001365 7.8e-11 71.2 123 38.2
CARHR229070 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.0e-10 70.9 151 36.4
AL7G37050 Arabidopsis lyrata HOM05D000053 ORTHO05D001365 2.3e-10 69.7 174 31.6
BcaB05g22373 Brassica carinata HOM05D001487 ORTHO05D001365 2.3e-10 69.7 151 33.1
C01p16390 Brassica napus HOM05D001487 ORTHO05D001365 2.3e-10 69.7 162 34.0
BolC1t01588H Brassica oleracea HOM05D001487 ORTHO05D001365 3.3e-09 65.9 121 35.5
AL7G31520 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 7.3e-09 64.7 157 33.8
A01p09640 Brassica napus HOM05D001487 ORTHO05D001365 9.5e-09 64.3 165 32.1
BcaC01g06627 Brassica carinata HOM05D001487 ORTHO05D001365 1.6e-08 63.5 150 34.0
BcaB02g09867 Brassica carinata HOM05D027275 ORTHO05D001365 2.1e-08 63.2 139 35.3
BcaB02g09872 Brassica carinata HOM05D001487 ORTHO05D001365 3.6e-08 62.4 118 36.4
Aa31LG5G4870 Aethionema arabicum HOM05D001487 ORTHO05D001365 1.4e-07 60.5 142 30.3
AL9U10710 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 4.0e-07 58.9 135 30.4
BcaNung00079 Brassica carinata HOM05D001487 ORTHO05D001365 4.0e-07 58.9 150 34.0
CARHR229020 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.0e-07 58.9 131 36.6
Aa31LG7G13470 Aethionema arabicum HOM05D001487 ORTHO05D001365 1.5e-06 57.0 174 31.0
BcaC09g47800 Brassica carinata HOM05D001487 ORTHO05D001365 4.4e-06 55.5 55 49.1
Thhalv10003406m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 4.4e-06 55.5 185 31.9


User provided reference genes

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