Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p35070 Brassica napus HOM05D003391 ORTHO05D013251 5.4e-50 200.7 100 100.0
BolC3t21285H Brassica oleracea HOM05D003391 ORTHO05D005563 7.6e-28 127.1 124 63.7
BcaC01g01234 Brassica carinata HOM05D003391 ORTHO05D005563 3.8e-27 124.8 118 63.6
C03p89680 Brassica napus HOM05D003391 ORTHO05D005563 1.9e-26 122.5 118 62.7
BcaB02g11154 Brassica carinata HOM05D003391 ORTHO05D005563 2.4e-26 122.1 118 62.7
BcaC05g27411 Brassica carinata HOM05D003391 ORTHO05D005563 4.2e-26 121.3 118 62.7
A05p20100 Brassica napus HOM05D003391 ORTHO05D005563 4.2e-26 121.3 118 62.7
C05p33590 Brassica napus HOM05D003391 ORTHO05D005563 4.2e-26 121.3 118 62.7
BraA05t20918Z Brassica rapa HOM05D003391 ORTHO05D005563 4.2e-26 121.3 118 62.7
Sp1g37350 Schrenkiella parvula HOM05D003391 ORTHO05D005563 7.1e-26 120.6 117 61.5
Carub.0001s3957 Capsella rubella HOM05D003391 ORTHO05D005563 9.3e-26 120.2 117 60.7
Aa31LG10G3790 Aethionema arabicum HOM05D003391 ORTHO05D005563 1.2e-25 119.8 118 61.0
AL1G58160 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 1.6e-25 119.4 118 60.2
AT1G50500 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 1.6e-25 119.4 118 60.2
BolC5t32086H Brassica oleracea HOM05D003391 ORTHO05D005563 4.6e-25 117.9 118 61.9
BcaB07g33280 Brassica carinata HOM05D000705 ORTHO05D013251 2.3e-24 115.5 57 91.2
CARHR040520 Cardamine hirsuta HOM05D003391 ORTHO05D005563 4.3e-23 111.3 102 60.8
BcaB06g26412 Brassica carinata HOM05D000705 ORTHO05D013251 5.6e-23 110.9 55 90.9
BcaC04g21046 Brassica carinata HOM05D000705 ORTHO05D013251 9.6e-23 110.2 55 90.9
C04p47270 Brassica napus HOM05D003391 ORTHO05D013251 1.3e-22 109.8 54 90.7
C07p36020 Brassica napus HOM05D003391 ORTHO05D013251 1.3e-22 109.8 55 90.9
C09p36290 Brassica napus HOM05D003391 ORTHO05D040219 1.3e-22 109.8 54 90.7
BolC4t26326H Brassica oleracea HOM05D003391 ORTHO05D013251 1.3e-22 109.8 54 90.7
BolC9t56466H Brassica oleracea HOM05D003391 ORTHO05D040219 1.3e-22 109.8 54 90.7
Sabra16G0023000 Salix brachista HOM05D003391 ORTHO05D005563 1.3e-22 109.8 117 55.6
Sabra16G0029200 Salix brachista HOM05D003391 ORTHO05D005563 1.3e-22 109.8 117 55.6
CiPaw.10G102000 Carya illinoinensis HOM05D003391 ORTHO05D005563 1.6e-22 109.4 117 57.3
A01p07480 Brassica napus HOM05D003391 ORTHO05D013251 2.1e-22 109.0 52 92.3
CANSAT64G0651 Cannabis sativa HOM05D003391 ORTHO05D005563 2.1e-22 109.0 122 54.9
THA.LOC104809239 Tarenaya hassleriana HOM05D003391 ORTHO05D005563 2.1e-22 109.0 108 62.0
Manes.01G037700 Manihot esculenta HOM05D003391 ORTHO05D005563 2.8e-22 108.6 117 58.1
BcaC08g44163 Brassica carinata HOM05D003391 ORTHO05D013251 4.8e-22 107.8 54 88.9
C03p10930 Brassica napus HOM05D000705 ORTHO05D013251 8.1e-22 107.1 54 88.9
MELO3C026391.2 Cucumis melo HOM05D003391 ORTHO05D005563 8.1e-22 107.1 117 58.1
CsaV3_4G032190 Cucumis sativus L. HOM05D003391 ORTHO05D005563 8.1e-22 107.1 117 58.1
QL04p065456 Quercus lobata HOM05D003391 ORTHO05D005563 8.1e-22 107.1 117 57.3
Potri.016G023000 Populus trichocarpa HOM05D003391 ORTHO05D005563 1.4e-21 106.3 117 55.6
Sed0012933 Sechium edule HOM05D003391 ORTHO05D005563 1.8e-21 105.9 116 56.0
PGR042G2316 Punica granatum HOM05D003391 ORTHO05D005563 3.1e-21 105.1 117 55.6
Lj6g0008612 Lotus japonicus HOM05D003391 ORTHO05D005563 6.9e-21 104.0 117 57.3
Lalb_Chr18g0057621 Lupinus albus HOM05D003391 ORTHO05D005563 6.9e-21 104.0 118 55.9
MD09G1135000 Malus domestica HOM05D003391 ORTHO05D005563 6.9e-21 104.0 108 59.3
TWI74G0249 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 6.9e-21 104.0 117 54.7
ClCG11G016680 Citrullus lanatus HOM05D003391 ORTHO05D005563 1.2e-20 103.2 117 57.3
MD17G1124000 Malus domestica HOM05D003391 ORTHO05D005563 1.2e-20 103.2 118 55.1
Prupe.3G191700 Prunus persica HOM05D003391 ORTHO05D005563 1.2e-20 103.2 108 58.3
Cpa.g.sc122.39 Carica papaya HOM05D003391 ORTHO05D005563 1.5e-20 102.8 108 57.4
FvH4_6g40130 Fragaria vesca HOM05D003391 ORTHO05D005563 1.5e-20 102.8 118 53.4
FAN05G0705 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.5e-20 102.8 118 53.4
Ciclev10028552m.g Citrus clementina HOM05D003391 ORTHO05D005563 2.0e-20 102.4 109 56.0
Glyma.09G018300 Glycine max HOM05D003391 ORTHO05D005563 2.0e-20 102.4 117 54.7
Glyma.15G124200 Glycine max HOM05D003391 ORTHO05D005563 2.6e-20 102.1 117 53.8
TPR.G10474 Trifolium pratense HOM05D003391 ORTHO05D005563 2.6e-20 102.1 117 54.7
Duzib068G0467 Durio zibethinus HOM05D003391 ORTHO05D005563 3.4e-20 101.7 117 54.7
FAN02G4219 Fragaria x ananassa HOM05D003391 ORTHO05D005563 3.4e-20 101.7 118 53.4
Sc24g0003350 Simmondsia chinensis HOM05D003391 ORTHO05D005563 3.4e-20 101.7 118 51.7
Cfa018226 Carpinus fangiana HOM05D003391 ORTHO05D005563 4.5e-20 101.3 118 54.2
TWI77G0821 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 4.5e-20 101.3 117 54.7
Lalb_Chr15g0088521 Lupinus albus HOM05D003391 ORTHO05D005563 7.6e-20 100.5 117 54.7
arahy.Tifrunner.gnm1.ann1.635YAA Arachis hypogaea HOM05D003391 ORTHO05D005563 9.9e-20 100.1 117 54.7
arahy.Tifrunner.gnm1.ann1.QTWQ8J Arachis hypogaea HOM05D003391 ORTHO05D005563 9.9e-20 100.1 117 54.7
Dinv10208 Davidia involucrata HOM05D003391 ORTHO05D005563 9.9e-20 100.1 117 53.8
Dinv04581 Davidia involucrata HOM05D003391 ORTHO05D005563 1.3e-19 99.8 117 53.8
Eucgr.L01917 Eucalyptus grandis HOM05D003391 ORTHO05D005563 1.3e-19 99.8 117 54.7
GSVIVG01016094001 Vitis vinifera HOM05D003391 ORTHO05D005563 1.3e-19 99.8 109 56.9
Ca_11369_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 2.2e-19 99.0 117 53.8
Ca_30786_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 2.2e-19 99.0 117 53.8
Nn7g37683 Nelumbo nucifera HOM05D003391 ORTHO05D005563 2.9e-19 98.6 117 52.1
Duzib084G0647 Durio zibethinus HOM05D003391 ORTHO05D005563 3.8e-19 98.2 117 52.1
FAN09G1714 Fragaria x ananassa HOM05D003391 ORTHO05D005563 3.8e-19 98.2 107 56.1
Phvul.006G134000 Phaseolus vulgaris HOM05D003391 ORTHO05D005563 3.8e-19 98.2 117 54.7
VMungo0540G0836 Vigna mungo HOM05D003391 ORTHO05D005563 3.8e-19 98.2 117 54.7
Medtr2g028270 Medicago truncatula HOM05D003391 ORTHO05D005563 4.9e-19 97.8 117 52.1
RcHm_v2.0_Chr2g0154761 Rosa chinensis HOM05D003391 ORTHO05D005563 4.9e-19 97.8 107 56.1
Ah.01g004390 Amaranthus hybridus HOM05D003391 ORTHO05D005563 8.4e-19 97.1 118 50.0
arahy.Tifrunner.gnm1.ann1.MM6MID Arachis hypogaea HOM05D003391 ORTHO05D005563 1.1e-18 96.7 117 53.0
Gohir.D08G181000 Gossypium hirsutum HOM05D003391 ORTHO05D005563 1.1e-18 96.7 114 53.5
Gorai.004G190000 Gossypium raimondii HOM05D003391 ORTHO05D005563 1.1e-18 96.7 114 53.5
TAR626G0891 Trochodendron aralioides HOM05D003391 ORTHO05D005563 1.1e-18 96.7 118 52.5
Atru.chr13.1440 Acer truncatum HOM05D003391 ORTHO05D005563 1.4e-18 96.3 117 53.0
Atru.chr13.1465 Acer truncatum HOM05D003391 ORTHO05D005563 1.4e-18 96.3 117 53.0
Thecc.03G235800 Theobroma cacao HOM05D003391 ORTHO05D005563 1.4e-18 96.3 117 51.3
COL.COLO4_06714 Corchorus olitorius HOM05D003391 ORTHO05D005563 2.4e-18 95.5 117 51.3
CSS0020230 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 3.2e-18 95.1 118 51.7
CSS0023421 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 3.2e-18 95.1 118 51.7
Gohir.A08G160766 Gossypium hirsutum HOM05D003391 ORTHO05D005563 3.2e-18 95.1 114 52.6
Aqoxy3G00251 Aquilegia oxysepala HOM05D003391 ORTHO05D005563 5.4e-18 94.4 117 48.7
Cc06_g14340 Coffea canephora HOM05D003391 ORTHO05D005563 5.4e-18 94.4 118 50.0
AUR62022296 Chenopodium quinoa HOM05D003391 ORTHO05D005563 9.3e-18 93.6 109 52.3
Oeu030440.3 Olea europaea HOM05D003391 ORTHO05D005563 9.3e-18 93.6 120 48.3
PSO541G1880 Papaver somniferum HOM05D003391 ORTHO05D005563 1.6e-17 92.8 108 54.6
CARHR041020 Cardamine hirsuta HOM05D003391 ORTHO05D013251 2.1e-17 92.4 117 47.9
Nitab4.5_0007706g0020 Nicotiana tabacum HOM05D003391 ORTHO05D005563 2.1e-17 92.4 118 50.8
Actinidia37789 Actinidia chinensis HOM05D003391 ORTHO05D005563 2.7e-17 92.0 106 53.8
Os01g0906200 Oryza sativa ssp. japonica HOM05D003391 ORTHO05D005563 2.7e-17 92.0 117 48.7
EL10Ac9g21140 Beta vulgaris HOM05D003391 ORTHO05D005563 3.5e-17 91.7 109 52.3
ECA236G2623 Erigeron canadensis HOM05D003391 ORTHO05D005563 3.5e-17 91.7 117 49.6
MBI18_g28220_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 4.6e-17 91.3 116 51.7
Haze_17876 Corylus avellana HOM05D003391 ORTHO05D005563 6.0e-17 90.9 152 44.1
HanXRQChr04g0122221 Helianthus annuus HOM05D003391 ORTHO05D005563 6.0e-17 90.9 117 48.7
Oeu033843.4 Olea europaea HOM05D003391 ORTHO05D005563 6.0e-17 90.9 120 45.8
PSO675G3205 Papaver somniferum HOM05D003391 ORTHO05D005563 6.0e-17 90.9 108 54.6
DCAR_003077 Daucus carota HOM05D003391 ORTHO05D005563 1.0e-16 90.1 106 51.9
FAN14G1902 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.0e-16 90.1 137 46.0
HanXRQChr03g0093781 Helianthus annuus HOM05D003391 ORTHO05D005563 1.3e-16 89.7 118 49.2
BcaB04g20116 Brassica carinata HOM05D003391 ORTHO05D013251 1.8e-16 89.4 44 86.4
Nitab4.5_0000575g0140 Nicotiana tabacum HOM05D003391 ORTHO05D005563 1.8e-16 89.4 118 50.0
ATR1098G037 Amborella trichopoda HOM05D003391 ORTHO05D005563 3.0e-16 88.6 101 53.5
AL1G58840 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 3.0e-16 88.6 92 54.3
vmacro13793 Vaccinium macrocarpon HOM05D003391 ORTHO05D005563 3.0e-16 88.6 106 51.9
CAN.G466.12 Capsicum annuum HOM05D003391 ORTHO05D005563 3.9e-16 88.2 108 51.9
Hma1.2p1_0583F.1_g183000 Hydrangea macrophylla HOM05D003391 ORTHO05D005563 3.9e-16 88.2 107 52.3
Solyc04g049490.3 Solanum lycopersicum HOM05D003391 ORTHO05D005563 3.9e-16 88.2 108 51.9
Sopen04g019460 Solanum pennellii HOM05D003391 ORTHO05D005563 3.9e-16 88.2 108 51.9
PGSC0003DMG402012873 Solanum tuberosum HOM05D003391 ORTHO05D005563 3.9e-16 88.2 108 51.9
Zm00001eb144220 Zea mays HOM05D003391 ORTHO05D005563 3.9e-16 88.2 118 47.5
CAN.G998.14 Capsicum annuum HOM05D003391 ORTHO05D005563 6.7e-16 87.4 108 51.9
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 6.7e-16 87.4 122 45.9
MSTRG.27454 Avicennia marina HOM05D003391 ORTHO05D005563 8.7e-16 87.0 118 46.6
MSTRG.9187 Avicennia marina HOM05D003391 ORTHO05D005563 1.1e-15 86.7 118 45.8
Hund02122 Selenicereus undatus HOM05D003391 ORTHO05D005563 1.1e-15 86.7 84 60.7
SalBow4G0334 Salvia bowleyana HOM05D003391 ORTHO05D005563 1.5e-15 86.3 118 46.6
HPP92_006005 Vanilla planifolia HOM05D003391 ORTHO05D005563 1.9e-15 85.9 118 44.9
AUR62023891 Chenopodium quinoa HOM05D003391 ORTHO05D005563 2.5e-15 85.5 84 58.3
AL1G58810 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 3.3e-15 85.1 92 55.4
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 3.3e-15 85.1 118 45.8
BcaB06g26410 Brassica carinata HOM05D000705 ORTHO05D013251 4.3e-15 84.7 42 88.1
Migut.F02007 Erythranthe guttata HOM05D003391 ORTHO05D005563 4.3e-15 84.7 120 45.0
Thhalv10012404m.g Eutrema salsugineum HOM05D003391 ORTHO05D005563 4.3e-15 84.7 49 79.6
Lsat_1_v5_gn_3_133361 Lactuca sativa HOM05D003391 ORTHO05D005563 5.6e-15 84.3 115 47.8
Lj7A654G26 Lonicera japonica HOM05D003391 ORTHO05D005563 1.6e-14 82.8 100 52.0
Peaxi162Scf00072g00087 Petunia axillaris HOM05D003391 ORTHO05D005563 3.7e-14 81.6 94 53.2
SGA_v2.0_scaffold62G21434 Striga asiatica HOM05D003391 ORTHO05D005563 1.4e-13 79.7 118 45.8
SHI21339 Sapria himalayana HOM05D003391 ORTHO05D005563 1.8e-13 79.3 101 48.5
Lsat_1_v5_gn_7_7561 Lactuca sativa HOM05D003391 ORTHO05D005563 3.1e-13 78.6 118 45.8
ECA240G2134 Erigeron canadensis HOM05D003391 ORTHO05D005563 2.0e-12 75.9 118 44.1
unitig_899.g14436 Utricularia gibba HOM05D003391 ORTHO05D005563 2.6e-12 75.5 113 41.6
AT1G50970 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 3.4e-12 75.1 114 43.9
Migut.F01784 Erythranthe guttata HOM05D003391 ORTHO05D005563 3.4e-12 75.1 107 45.8
SEGI_21663 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 4.2e-10 68.2 118 37.3
BolC2t08516H Brassica oleracea HOM05D000705 ORTHO05D013251 7.1e-10 67.4 41 75.6
SGA_v2.0_scaffold48G17900 Striga asiatica HOM05D003391 ORTHO05D013251 1.6e-09 66.2 88 45.5
SEGI_03483 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 6.0e-09 64.3 109 37.6
Mapoly0030s0152 Marchantia polymorpha HOM05D003391 ORTHO05D005563 1.8e-08 62.8 100 41.0
SMO196G0220 Selaginella moellendorffii HOM05D003391 ORTHO05D005563 2.3e-08 62.4 100 41.0
Psat1g171000 Pisum sativum HOM05D003391 ORTHO05D005563 6.7e-08 60.8 82 52.4
CAN.G5179.1 Capsicum annuum HOM05D003391 ORTHO05D005563 1.5e-07 59.7 40 67.5
Atru.chr7.1997 Acer truncatum HOM05D003391 ORTHO05D019401 3.3e-07 58.5 31 87.1
Pp3c24_4920 Physcomitrium patens HOM05D003391 ORTHO05D005563 8.2e-06 53.9 110 36.4


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