Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p27020 Brassica napus HOM05D000894 ORTHO05D002325 1.3e-36 156.0 82 100.0
BraA02t07717Z Brassica rapa HOM05D000894 ORTHO05D002325 1.3e-36 156.0 82 100.0
BolC2t10311H Brassica oleracea HOM05D000894 ORTHO05D002325 1.9e-24 115.5 68 89.7
AT5G42220 Arabidopsis thaliana HOM05D000894 ORTHO05D002325 1.0e-22 109.8 69 84.1
Thhalv10003631m.g Eutrema salsugineum HOM05D000894 ORTHO05D002325 1.0e-22 109.8 69 84.1
BcaC03g16458 Brassica carinata HOM05D000894 ORTHO05D002325 1.8e-22 109.0 68 85.3
C02p42750 Brassica napus HOM05D000894 ORTHO05D002325 1.8e-22 109.0 68 85.3
Carub.0008s0704 Capsella rubella HOM05D000894 ORTHO05D002325 2.3e-22 108.6 69 82.6
BcaC04g22008 Brassica carinata HOM05D000894 ORTHO05D002325 6.7e-22 107.1 62 90.3
A09p19540 Brassica napus HOM05D000894 ORTHO05D002325 6.7e-22 107.1 62 90.3
C09p24910 Brassica napus HOM05D000894 ORTHO05D002325 6.7e-22 107.1 62 90.3
BolC9t55382H Brassica oleracea HOM05D000894 ORTHO05D002325 6.7e-22 107.1 62 90.3
BraA09t37568Z Brassica rapa HOM05D000894 ORTHO05D002325 6.7e-22 107.1 62 90.3
CARHR184490 Cardamine hirsuta HOM05D000894 ORTHO05D002325 6.7e-22 107.1 69 81.2
BcaNung05258 Brassica carinata HOM05D000894 ORTHO05D002325 7.4e-21 103.6 68 79.4
BcaB07g31087 Brassica carinata HOM05D000894 ORTHO05D002325 9.6e-21 103.2 68 79.4
C01p11250 Brassica napus HOM05D000894 ORTHO05D002325 9.6e-21 103.2 62 85.5
AL8G19490 Arabidopsis lyrata HOM05D000894 ORTHO05D002325 1.6e-20 102.4 69 78.3
BolC1t01090H Brassica oleracea HOM05D000894 ORTHO05D002325 2.1e-20 102.1 62 83.9
Sp7g08390 Schrenkiella parvula HOM05D000894 ORTHO05D002325 6.2e-20 100.5 62 87.1
Aa31LG9G12370 Aethionema arabicum HOM05D000894 ORTHO05D002325 2.4e-19 98.6 68 75.0
Cpa.g.sc26.232 Carica papaya HOM05D000894 ORTHO05D002325 3.5e-15 84.7 61 70.5
THA.LOC104809699 Tarenaya hassleriana HOM05D000894 ORTHO05D002325 6.0e-15 84.0 62 67.7
TWI56G0050 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 1.0e-14 83.2 69 63.8
Potri.002G013500 Populus trichocarpa HOM05D000894 ORTHO05D002325 1.8e-14 82.4 69 63.8
Migut.N03195 Erythranthe guttata HOM05D000894 ORTHO05D002325 2.3e-14 82.0 68 64.7
SGA_v2.0_scaffold19G08600 Striga asiatica HOM05D000894 ORTHO05D002325 5.1e-14 80.9 68 60.3
Potri.005G247900 Populus trichocarpa HOM05D000894 ORTHO05D002325 8.7e-14 80.1 69 62.3
Glyma.14G223100 Glycine max HOM05D000894 ORTHO05D002325 1.1e-13 79.7 69 59.4
arahy.Tifrunner.gnm1.ann1.LYL18I Arachis hypogaea HOM05D000894 ORTHO05D002325 1.5e-13 79.3 69 60.9
arahy.Tifrunner.gnm1.ann1.U1RN9D Arachis hypogaea HOM05D000894 ORTHO05D002325 1.5e-13 79.3 69 60.9
arahy.Tifrunner.gnm1.ann1.W1R3NJ Arachis hypogaea HOM05D000894 ORTHO05D002325 1.5e-13 79.3 69 60.9
Lalb_Chr03g0033601 Lupinus albus HOM05D000894 ORTHO05D002325 1.5e-13 79.3 69 60.9
Lalb_Chr19g0131691 Lupinus albus HOM05D000894 ORTHO05D002325 1.5e-13 79.3 69 59.4
Sabra02G0010500 Salix brachista HOM05D000894 ORTHO05D002325 1.5e-13 79.3 69 60.9
DCAR_013900 Daucus carota HOM05D000894 ORTHO05D002325 1.9e-13 79.0 61 67.2
CANSAT25G1636 Cannabis sativa HOM05D000894 ORTHO05D002325 3.3e-13 78.2 61 65.6
COL.COLO4_21614 Corchorus olitorius HOM05D000894 ORTHO05D002325 3.3e-13 78.2 69 60.9
MELO3C017008.2 Cucumis melo HOM05D000894 ORTHO05D002325 3.3e-13 78.2 69 59.4
CsaV3_4G037100 Cucumis sativus L. HOM05D000894 ORTHO05D002325 3.3e-13 78.2 69 59.4
Hma1.2p1_1260F.1_g271030 Hydrangea macrophylla HOM05D000894 ORTHO05D002325 3.3e-13 78.2 69 59.4
Psat6g000200 Pisum sativum HOM05D000894 ORTHO05D002325 3.3e-13 78.2 69 60.9
Gorai.009G189700 Gossypium raimondii HOM05D000894 ORTHO05D002325 4.3e-13 77.8 69 60.9
Phvul.001G001400 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 4.3e-13 77.8 69 58.0
Gohir.D05G184200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 5.7e-13 77.4 69 60.9
Sabra05G0191600 Salix brachista HOM05D000894 ORTHO05D002325 7.4e-13 77.0 69 59.4
Thecc.08G055200 Theobroma cacao HOM05D000894 ORTHO05D002325 7.4e-13 77.0 69 60.9
Duzib093G2095 Durio zibethinus HOM05D000894 ORTHO05D002325 9.6e-13 76.6 69 60.9
Glyma.17G261600 Glycine max HOM05D000894 ORTHO05D002325 9.6e-13 76.6 69 58.0
QL02p013593 Quercus lobata HOM05D000894 ORTHO05D002325 9.6e-13 76.6 69 56.5
Aqoxy3G00355 Aquilegia oxysepala HOM05D000894 ORTHO05D002325 1.3e-12 76.3 60 63.3
MSTRG.1129 Avicennia marina HOM05D000894 ORTHO05D002325 1.3e-12 76.3 68 57.4
EL10Ac1g02026 Beta vulgaris HOM05D000894 ORTHO05D002325 1.3e-12 76.3 68 57.4
AUR62013832 Chenopodium quinoa HOM05D000894 ORTHO05D002325 1.3e-12 76.3 69 56.5
AUR62036772 Chenopodium quinoa HOM05D000894 ORTHO05D002325 1.3e-12 76.3 69 56.5
ClCG05G015220 Citrullus lanatus HOM05D000894 ORTHO05D002325 1.3e-12 76.3 69 58.0
Lalb_Chr01g0008391 Lupinus albus HOM05D000894 ORTHO05D002325 1.3e-12 76.3 69 58.0
Oeu025003.4 Olea europaea HOM05D000894 ORTHO05D002325 1.3e-12 76.3 69 55.1
Dinv39574 Davidia involucrata HOM05D000894 ORTHO05D002325 1.6e-12 75.9 69 59.4
Gohir.A05G181200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 1.6e-12 75.9 69 59.4
Atru.chr13.174 Acer truncatum HOM05D000894 ORTHO05D002325 2.1e-12 75.5 69 59.4
Gohir.D05G256500 Gossypium hirsutum HOM05D000894 ORTHO05D002325 2.1e-12 75.5 61 65.6
Gorai.009G268000 Gossypium raimondii HOM05D000894 ORTHO05D002325 2.1e-12 75.5 61 65.6
MD08G1004700 Malus domestica HOM05D000894 ORTHO05D002325 2.1e-12 75.5 68 58.8
Ah.11g040680 Amaranthus hybridus HOM05D000894 ORTHO05D002325 2.8e-12 75.1 69 56.5
Gohir.A05G254900 Gossypium hirsutum HOM05D000894 ORTHO05D002325 2.8e-12 75.1 61 63.9
MD15G1004200 Malus domestica HOM05D000894 ORTHO05D002325 2.8e-12 75.1 68 58.8
Oeu046333.2 Olea europaea HOM05D000894 ORTHO05D002325 2.8e-12 75.1 69 55.1
TPR.G26410 Trifolium pratense HOM05D000894 ORTHO05D002325 2.8e-12 75.1 69 58.0
TAR381G0735 Trochodendron aralioides HOM05D000894 ORTHO05D002325 2.8e-12 75.1 69 56.5
CSS0044890 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 3.7e-12 74.7 69 58.0
CSS0030543 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 4.8e-12 74.3 69 58.0
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 4.8e-12 74.3 69 59.4
Medtr1g026290 Medicago truncatula HOM05D000894 ORTHO05D002325 4.8e-12 74.3 69 56.5
Actinidia15476 Actinidia chinensis HOM05D000894 ORTHO05D002325 6.2e-12 73.9 69 55.1
Ca_13492_v3 Cicer arietinum L. HOM05D000894 ORTHO05D002325 6.2e-12 73.9 69 56.5
Cc10_g00880 Coffea canephora HOM05D000894 ORTHO05D002325 6.2e-12 73.9 69 55.1
Duzib041G0349 Durio zibethinus HOM05D000894 ORTHO05D002325 6.2e-12 73.9 61 63.9
Nn5g30896 Nelumbo nucifera HOM05D000894 ORTHO05D002325 6.2e-12 73.9 69 58.0
PGR083G1464 Punica granatum HOM05D000894 ORTHO05D002325 1.1e-11 73.2 69 58.0
Solyc04g082160.4 Solanum lycopersicum HOM05D000894 ORTHO05D002325 1.1e-11 73.2 68 54.4
Sopen04g035790 Solanum pennellii HOM05D000894 ORTHO05D002325 1.1e-11 73.2 68 54.4
TAR625G0558 Trochodendron aralioides HOM05D000894 ORTHO05D002325 1.1e-11 73.2 69 53.6
Lsat_1_v5_gn_3_7681 Lactuca sativa HOM05D000894 ORTHO05D002325 1.8e-11 72.4 62 61.3
Peaxi162Scf00174g00159 Petunia axillaris HOM05D000894 ORTHO05D002325 1.8e-11 72.4 68 54.4
Prupe.1G356800 Prunus persica HOM05D000894 ORTHO05D002325 1.8e-11 72.4 61 62.3
Cfa014035 Carpinus fangiana HOM05D000894 ORTHO05D002325 2.4e-11 72.0 69 55.1
Ciclev10000172m.g Citrus clementina HOM05D000894 ORTHO05D002325 2.4e-11 72.0 61 57.4
FvH4_2g37770 Fragaria vesca HOM05D000894 ORTHO05D002325 2.4e-11 72.0 61 62.3
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.4e-11 72.0 61 62.3
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.4e-11 72.0 61 62.3
Rhsim06G0009500 Rhododendron simsii HOM05D000894 ORTHO05D002325 2.4e-11 72.0 69 53.6
RcHm_v2.0_Chr6g0303971 Rosa chinensis HOM05D000894 ORTHO05D002325 4.0e-11 71.2 61 60.7
Haze_22740 Corylus avellana HOM05D000894 ORTHO05D002325 5.3e-11 70.9 69 55.1
HanXRQChr06g0165771 Helianthus annuus HOM05D000894 ORTHO05D002325 5.3e-11 70.9 62 61.3
Nitab4.5_0000588g0330 Nicotiana tabacum HOM05D000894 ORTHO05D002325 5.3e-11 70.9 68 51.5
CiPaw.07G141400 Carya illinoinensis HOM05D000894 ORTHO05D002325 6.9e-11 70.5 69 55.1
Lj4C803T7 Lonicera japonica HOM05D000894 ORTHO05D002325 9.0e-11 70.1 59 57.6
Lj5g0012630 Lotus japonicus HOM05D000894 ORTHO05D002325 9.0e-11 70.1 70 55.7
Sc02g0008970 Simmondsia chinensis HOM05D000894 ORTHO05D002325 1.2e-10 69.7 61 55.7
CSS0020420 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 2.0e-10 68.9 69 55.1
Eucgr.F01713 Eucalyptus grandis HOM05D000894 ORTHO05D002325 2.0e-10 68.9 61 60.7
HanXRQChr17g0533381 Helianthus annuus HOM05D000894 ORTHO05D002325 2.0e-10 68.9 62 58.1
PGSC0003DMG400009894 Solanum tuberosum HOM05D000894 ORTHO05D002325 2.0e-10 68.9 68 51.5
vmacro21837 Vaccinium macrocarpon HOM05D000894 ORTHO05D002325 3.4e-10 68.2 69 50.7
CANSAT25G2538 Cannabis sativa HOM05D000894 ORTHO05D002325 7.6e-10 67.0 61 59.0
ECA246G4835 Erigeron canadensis HOM05D000894 ORTHO05D002325 7.6e-10 67.0 57 59.6
Sed0000145 Sechium edule HOM05D000894 ORTHO05D002325 1.7e-09 65.9 69 50.7
unitig_32.g11246 Utricularia gibba HOM05D000894 ORTHO05D002325 2.2e-09 65.5 68 47.1
Sed0000541 Sechium edule HOM05D000894 ORTHO05D002325 5.0e-09 64.3 69 55.1
Manes.05G140700 Manihot esculenta HOM05D000894 ORTHO05D002325 3.2e-08 61.6 54 59.3
HanXRQChr02g0048881 Helianthus annuus HOM05D000894 ORTHO05D002325 1.2e-07 59.7 63 46.0
GSVIVG01029432001 Vitis vinifera HOM05D000894 ORTHO05D002325 1.6e-07 59.3 54 53.7
CDE02G0614 Ceratophyllum demersum HOM05D000894 ORTHO05D002325 3.5e-07 58.2 63 49.2
SGA_v2.0_scaffold25G11192 Striga asiatica HOM05D000894 ORTHO05D002325 5.1e-06 54.3 66 45.5


User provided reference genes

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