Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 0.0e+00 1239.9 625 100.0
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 0.0e+00 1198.3 648 94.8
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 0.0e+00 1195.6 656 94.1
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 0.0e+00 1184.1 660 92.9
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 0.0e+00 1146.0 609 96.1
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 0.0e+00 1099.3 607 91.3
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 0.0e+00 1088.9 607 90.8
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 0.0e+00 1087.4 610 91.8
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 2.0e-307 1058.5 597 90.8
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 1.3e-306 1055.8 607 89.1
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 3.7e-306 1054.3 607 89.0
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 2.0e-296 1021.9 607 86.8
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 1.7e-290 1002.3 623 83.1
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 8.3e-282 973.4 607 83.5
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 7.3e-262 907.1 605 77.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 7.1e-257 890.6 602 74.8
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 2.7e-256 888.6 602 74.1
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 2.7e-256 888.6 602 74.1
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 1.0e-255 886.7 607 75.6
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 1.0e-255 886.7 606 74.6
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.8e-252 875.9 596 75.8
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 3.1e-252 875.2 612 73.5
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 4.0e-252 874.8 618 73.8
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 9.0e-252 873.6 596 75.2
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.5e-251 872.8 585 75.4
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 2.0e-251 872.5 585 75.4
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 1.3e-250 869.8 607 72.3
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 4.9e-250 867.8 596 75.2
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 4.2e-249 864.8 612 73.2
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 1.6e-248 862.8 607 72.8
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.6e-248 862.8 608 73.4
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 3.5e-248 861.7 608 73.2
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 2.3e-247 859.0 591 73.8
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 3.9e-247 858.2 607 72.7
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 6.6e-247 857.4 598 72.2
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 8.7e-247 857.1 615 72.2
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.9e-246 855.9 608 72.2
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 1.3e-245 853.2 597 73.4
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 8.1e-245 850.5 608 72.4
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 3.1e-244 848.6 603 72.5
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 4.0e-244 848.2 607 71.7
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 6.9e-244 847.4 605 71.9
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 9.0e-244 847.0 522 79.1
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 1.5e-243 846.3 598 72.2
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 2.0e-243 845.9 606 71.1
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 5.8e-243 844.3 592 73.3
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 2.9e-242 842.0 616 70.3
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 3.8e-242 841.6 611 71.8
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.2e-241 838.6 608 71.9
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 4.2e-241 838.2 602 70.9
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.2e-240 836.6 601 71.2
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.7e-240 835.5 630 69.8
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 2.7e-240 835.5 533 78.4
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 3.5e-240 835.1 596 72.5
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 7.9e-240 833.9 601 71.0
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 1.3e-239 833.2 594 71.7
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 1.8e-239 832.8 606 70.0
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.3e-239 832.4 596 71.6
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 3.9e-239 831.6 606 70.0
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 5.1e-239 831.2 601 71.2
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 1.1e-238 830.1 592 73.1
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 5.6e-238 827.8 639 68.2
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 2.1e-237 825.9 534 75.7
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 2.1e-237 825.9 603 70.3
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 1.5e-235 819.7 528 76.5
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 2.0e-235 819.3 600 69.0
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 4.9e-234 814.7 588 70.4
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 5.5e-233 811.2 588 70.2
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 1.6e-232 809.7 512 77.7
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 3.5e-232 808.5 608 69.9
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 7.9e-232 807.4 582 70.6
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 5.1e-231 804.7 594 69.9
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 2.5e-230 802.4 589 70.3
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 1.6e-229 799.7 594 69.4
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 2.0e-227 792.7 603 69.3
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 4.5e-227 791.6 758 58.8
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 7.6e-227 790.8 588 70.2
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 1.6e-224 783.1 587 69.3
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 1.5e-222 776.5 639 65.4
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 7.6e-219 764.2 686 60.9
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 5.0e-218 761.5 590 66.9
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 1.9e-217 759.6 596 65.4
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.3e-213 746.9 566 68.6
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 8.2e-213 744.2 607 65.6
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 9.4e-209 730.7 520 70.8
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 3.3e-206 722.2 607 64.4
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 7.7e-203 711.1 494 73.3
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 7.4e-198 694.5 515 66.2
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 9.7e-198 694.1 613 59.4
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 4.8e-197 691.8 654 59.5
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 4.8e-197 691.8 575 64.2
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.4e-196 690.3 740 53.9
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 6.1e-192 674.9 591 60.4
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 3.0e-191 672.5 463 75.2
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 2.2e-189 666.4 558 62.0
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 3.1e-188 662.5 609 60.9
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.5e-187 658.7 571 61.3
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 9.5e-177 624.4 445 70.8
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 5.2e-175 618.6 458 68.8
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 3.3e-145 519.6 399 66.7
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 3.5e-131 473.0 361 65.9
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 7.8e-131 471.9 351 68.1
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 3.4e-126 456.4 270 80.0
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 3.4e-126 456.4 290 79.3
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 6.0e-123 445.7 313 71.2
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 3.9e-122 443.0 566 45.6
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 2.6e-102 377.1 396 54.8
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 5.0e-93 346.3 262 69.5
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 4.7e-91 339.7 188 86.7
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 2.7e-83 313.9 253 65.6
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 1.1e-81 308.5 206 70.9
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 9.7e-73 278.9 449 37.2
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 2.1e-59 234.6 220 60.5
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 3.9e-53 213.8 182 62.6
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.5e-49 201.8 366 38.3
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 3.7e-48 197.2 137 70.1
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 1.2e-46 192.2 108 79.6
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 3.0e-45 187.6 153 64.1
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.4e-39 167.9 174 55.7
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.9e-36 158.3 109 66.1
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 8.9e-26 122.9 134 58.2
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 3.4e-25 120.9 267 32.6
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 6.4e-24 116.7 66 74.2
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.1e-22 111.7 178 47.8
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 3.0e-13 81.3 160 39.4


User provided reference genes

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