Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 0.0e+00 4416.7 2241 100.0
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 0.0e+00 2595.8 1450 92.6
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 0.0e+00 1614.7 903 92.0
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 0.0e+00 1547.7 875 91.3
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 0.0e+00 1433.7 759 95.5
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 0.0e+00 1399.4 883 82.8
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 0.0e+00 1398.3 761 93.0
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 0.0e+00 1389.4 761 92.9
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 0.0e+00 1380.2 762 92.3
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 0.0e+00 1317.0 914 77.0
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 0.0e+00 1271.5 893 75.4
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 0.0e+00 1266.1 893 75.6
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 0.0e+00 1251.5 890 75.1
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 0.0e+00 1250.7 867 76.6
BraA01t01177Z Brassica rapa HOM05D004256 ORTHO05D005224 0.0e+00 1142.1 599 97.0
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 8.3e-308 1061.6 878 64.7
BcaC09g51292 Brassica carinata HOM05D004256 ORTHO05D005224 1.1e-304 1051.2 602 90.7
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 5.8e-285 985.7 886 60.2
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 1.3e-284 984.6 890 59.6
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 1.1e-283 981.5 768 69.5
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 8.7e-281 971.8 875 59.9
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 2.3e-273 947.2 842 62.1
AT4G20920 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 1.5e-272 944.5 759 66.7
CARHR227480 Cardamine hirsuta HOM05D004256 ORTHO05D005224 2.2e-268 930.6 768 65.9
Sp7g19005 Schrenkiella parvula HOM05D004256 ORTHO05D005224 1.2e-242 845.1 549 80.0
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 3.0e-225 787.3 919 48.4
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 8.8e-225 785.8 914 49.6
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 1.1e-224 785.4 916 47.9
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 1.4e-222 778.5 897 49.9
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 3.1e-214 750.7 910 47.3
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.7e-212 745.0 886 48.0
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 2.5e-211 741.1 883 47.5
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 4.2e-211 740.3 886 48.0
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 2.1e-210 738.0 897 47.8
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 4.0e-209 733.8 892 47.2
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 2.2e-207 728.0 877 49.0
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 4.9e-207 726.9 891 46.7
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 1.6e-205 721.8 892 45.9
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.1e-203 715.7 867 48.0
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 1.5e-203 715.3 878 45.2
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 3.3e-203 714.1 882 46.8
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 4.3e-203 713.8 869 46.0
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 1.6e-202 711.8 896 46.2
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 8.0e-202 709.5 897 46.3
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 2.3e-201 708.0 888 46.8
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 3.2e-198 697.6 881 47.4
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 1.0e-196 692.6 894 46.6
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 1.9e-195 688.3 920 44.7
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 2.5e-195 688.0 881 46.4
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 3.3e-195 687.6 885 46.4
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 1.2e-194 685.6 883 46.1
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 1.6e-194 685.3 881 45.4
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 2.1e-194 684.9 888 46.1
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 2.3e-193 681.4 885 44.7
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 5.2e-193 680.2 885 45.3
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.2e-192 679.1 912 44.5
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 2.0e-192 678.3 880 45.0
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 3.4e-192 677.6 891 44.9
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 7.5e-192 676.4 928 43.6
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 7.5e-192 676.4 896 46.2
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 3.7e-191 674.1 881 45.6
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 7.0e-190 669.8 896 45.8
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 9.2e-190 669.5 872 46.6
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 2.7e-189 667.9 889 45.7
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.6e-189 667.2 885 45.0
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 4.6e-189 667.2 896 44.2
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 6.0e-189 666.8 928 43.3
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 1.0e-188 666.0 887 45.7
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 1.0e-188 666.0 898 44.7
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 3.0e-188 664.5 884 44.8
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 4.3e-187 660.6 891 43.9
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 4.3e-187 660.6 870 45.2
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 9.5e-187 659.4 873 45.4
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 2.1e-186 658.3 889 44.9
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 2.1e-186 658.3 901 44.6
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 8.1e-186 656.4 889 45.4
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 5.2e-185 653.7 899 44.9
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 5.2e-185 653.7 897 44.0
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 6.8e-185 653.3 893 43.9
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 2.0e-184 651.7 915 43.8
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 1.2e-181 642.5 895 43.8
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 1.2e-181 642.5 886 43.7
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 1.6e-181 642.1 874 43.7
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 1.6e-181 642.1 836 45.2
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 3.5e-181 641.0 868 44.2
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 1.0e-180 639.4 894 43.7
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 2.8e-178 631.3 872 42.4
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 2.3e-177 628.2 928 43.4
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 6.8e-177 626.7 949 42.3
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 5.8e-176 623.6 870 43.9
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 5.4e-174 617.1 846 44.3
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 1.3e-172 612.5 869 44.0
Gohir.D06G123900 Gossypium hirsutum HOM05D004256 ORTHO05D005224 2.3e-172 611.7 787 45.5
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 8.6e-172 609.8 877 43.6
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 4.0e-169 600.9 918 41.9
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 2.9e-167 594.7 874 42.7
Eucgr.L00874 Eucalyptus grandis HOM05D004256 ORTHO05D005224 2.1e-162 578.6 755 45.7
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 6.2e-162 577.0 873 41.4
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 1.3e-154 552.7 818 41.8
Potri.011G163600 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.2e-152 546.2 793 43.1
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 2.4e-145 521.9 892 39.1
Dinv16826 Davidia involucrata HOM05D004256 ORTHO05D005224 6.9e-137 493.8 768 40.5
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 3.4e-136 491.5 876 37.9
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.4e-129 468.8 646 44.7
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 5.3e-129 467.6 646 44.7
BcaNung04718 Brassica carinata HOM05D004256 ORTHO05D005224 1.3e-127 463.0 347 68.3
Sed0001829 Sechium edule HOM05D004256 ORTHO05D005224 5.0e-127 461.1 762 38.5
BcaNung04717 Brassica carinata HOM05D004256 ORTHO05D005224 6.5e-127 460.7 432 61.3
BolC1t01427H Brassica oleracea HOM05D004256 ORTHO05D005224 1.9e-126 459.1 353 69.4
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-122 446.0 745 38.7
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.1e-121 441.4 802 38.7
Actinidia31384 Actinidia chinensis HOM05D004256 ORTHO05D005224 3.2e-118 431.8 670 40.1
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 5.5e-118 431.0 992 34.0
SMO165G0118 Selaginella moellendorffii HOM05D004256 ORTHO05D005224 5.5e-118 431.0 828 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 2.1e-117 429.1 870 35.4
Sc17g0004590 Simmondsia chinensis HOM05D004256 ORTHO05D005224 1.5e-115 422.9 697 38.9
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 3.6e-109 401.7 903 32.0
FAN13G2402 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.8e-106 392.1 796 34.4
AUR62043099 Chenopodium quinoa HOM05D004256 ORTHO05D005224 4.2e-94 351.7 690 34.6
AUR62034030 Chenopodium quinoa HOM05D004256 ORTHO05D005224 1.4e-92 346.7 688 33.9
Haze_10384 Corylus avellana HOM05D004256 ORTHO05D005224 4.0e-84 318.5 691 33.0
Haze_10386 Corylus avellana HOM05D004256 ORTHO05D005224 6.8e-84 317.8 691 32.9
FAN04G0519 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.3e-82 313.5 530 37.2
FAN08G1809 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.9e-82 312.4 459 40.3
Hma1.2p1_2369F.1_g320760 Hydrangea macrophylla HOM05D004256 ORTHO05D005224 6.4e-82 311.2 503 40.4
Sc17g0004580 Simmondsia chinensis HOM05D004256 ORTHO05D005224 6.4e-82 311.2 256 63.7
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 6.4e-82 311.2 341 52.8
BcaC01g00730 Brassica carinata HOM05D004256 ORTHO05D005224 2.3e-79 302.8 208 75.0
CDE02G0763 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 3.0e-79 302.4 595 35.0
Actinidia31383 Actinidia chinensis HOM05D004256 ORTHO05D005224 1.2e-77 297.0 258 60.9
BcaC09g51293 Brassica carinata HOM05D004256 ORTHO05D005224 1.3e-74 287.0 182 81.3
Zm00001eb161380 Zea mays HOM05D004256 ORTHO05D005224 1.4e-73 283.5 597 35.3
BcaC09g51294 Brassica carinata HOM05D004256 ORTHO05D005224 3.6e-69 268.9 145 92.4
CSS0013637 Camellia sinensis var. sinensis HOM05D004256 ORTHO05D005224 6.2e-69 268.1 359 42.3
FAN08G3148 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.5e-62 246.9 225 60.0
CBR_g29910 Chara braunii HOM05D000019 ORTHO05D005224 4.3e-54 218.8 1026 24.6
CDE02G4682 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 1.4e-44 187.2 288 38.2
SEGI_28315 Sequoiadendron giganteum HOM05D004256 ORTHO05D005224 1.1e-41 177.6 193 51.3
FAN25G0985 Fragaria x ananassa HOM05D004256 ORTHO05D005224 5.4e-41 175.3 206 42.2
Dinv16824 Davidia involucrata HOM05D010983 ORTHO05D005224 2.7e-40 172.9 138 65.2
BcaC06g34131 Brassica carinata HOM05D004256 ORTHO05D005224 5.6e-38 165.2 139 64.7
HanXRQChr04g0117231 Helianthus annuus HOM05D004256 ORTHO05D005224 7.4e-38 164.9 270 38.5
BcaC08g44368 Brassica carinata HOM05D004256 ORTHO05D005224 1.7e-34 153.7 164 53.7
BcaC04g20971 Brassica carinata HOM05D004256 ORTHO05D005224 4.9e-34 152.1 153 54.9
Haze_10382 Corylus avellana HOM05D004256 ORTHO05D005224 5.5e-33 148.7 568 28.0
Zm00001eb318280 Zea mays HOM05D004256 ORTHO05D005224 1.1e-28 134.4 139 53.2
Zm00001eb318270 Zea mays HOM05D004256 ORTHO05D005224 2.6e-27 129.8 323 31.6
BcaC02g08729 Brassica carinata HOM05D004256 ORTHO05D021760 3.4e-27 129.4 117 59.8
Ca_18291_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 3.7e-21 109.4 92 59.8
BolC6t37010H Brassica oleracea HOM05D004256 ORTHO05D005224 4.8e-21 109.0 115 53.9
BolC1t01694H Brassica oleracea HOM05D004256 ORTHO05D021760 6.3e-21 108.6 91 67.0
BcaC09g51040 Brassica carinata HOM05D004256 ORTHO05D005224 1.1e-20 107.8 89 67.4
C01p17580 Brassica napus HOM05D004256 ORTHO05D005224 1.8e-20 107.1 91 65.9
BcaC01g00450 Brassica carinata HOM05D004256 ORTHO05D032009 2.4e-20 106.7 90 65.6
CAN.G79.20 Capsicum annuum HOM05D004256 ORTHO05D005224 2.4e-20 106.7 120 48.3
C03p79980 Brassica napus HOM05D004256 ORTHO05D032009 3.1e-20 106.3 90 65.6
BolC3t20250H Brassica oleracea HOM05D004256 ORTHO05D032009 3.1e-20 106.3 90 65.6
Haze_10375 Corylus avellana HOM05D004256 ORTHO05D005224 2.2e-18 100.1 119 42.9
BolC1t04773H Brassica oleracea HOM05D004256 ORTHO05D021760 6.5e-18 98.6 85 64.7
Zm00001eb357190 Zea mays HOM05D004256 ORTHO05D005224 1.4e-17 97.4 139 34.5
C03p36320 Brassica napus HOM05D004256 ORTHO05D021760 3.6e-16 92.8 90 64.4
BolC3t15944H Brassica oleracea HOM05D004256 ORTHO05D021760 3.6e-16 92.8 90 64.4
Haze_01153 Corylus avellana HOM05D004256 ORTHO05D005224 3.6e-16 92.8 155 38.1
A09p29560 Brassica napus HOM05D004256 ORTHO05D005224 3.0e-15 89.7 115 47.0
C01p48000 Brassica napus HOM05D004256 ORTHO05D021760 4.3e-14 85.9 107 47.7
Actinidia33023 Actinidia chinensis HOM05D004256 ORTHO05D005224 1.1e-12 81.3 87 47.1
Cre03.g191200 Chlamydomonas reinhardtii HOM05D004256 ORTHO05D005224 1.1e-12 81.3 277 26.0
VMungo0251G1407 Vigna mungo HOM05D004256 ORTHO05D005224 1.1e-12 81.3 85 49.4
PGSC0003DMG400021115 Solanum tuberosum HOM05D004256 ORTHO05D005224 3.4e-11 76.3 107 38.3
FvH4_5g29180 Fragaria vesca HOM05D004256 ORTHO05D005224 1.1e-09 71.2 80 47.5
SEGI_09964 Sequoiadendron giganteum HOM05D000070 ORTHO05D005224 2.5e-09 70.1 69 52.2
arahy.Tifrunner.gnm1.ann1.2P4BCH Arachis hypogaea HOM05D004256 ORTHO05D005224 1.0e-07 64.7 70 47.1


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