Anchorpoints

Gene id
TP1G10210
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP6G16750similar to AT5G54810|TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1)ch6-6-View
TP7G25040similar to AT4G27070|TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2)ch7-4+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G14920No description available.scaffold_7-View
AL1G11860No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G54810A.thaliana tryptophan synthase beta subunit (trpB) tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tryptophan synthase beta-subunit 15-View
AT4G27070tryptophan synthase beta-subunit 2 Tryptophan synthase beta. Expressed at low levels in all tissues. tryptophan synthase beta-subunit 2 (TSB2); CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).4+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00062G00190No description available.scaffold00062-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G17380No description available.A01+View
BR08G28770No description available.A08-View
BR03G49430No description available.A03+View
BR10G08340No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G14430No description available.Bvchr8_un.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G04750No description available.Chr3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G05800No description available.CM3.5_scaffold00001-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00097G00460No description available.supercontig_97-View
CP00198G00190No description available.supercontig_198+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G12980No description available.scaffold_7-View
CRU_001G10650No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00010G01370No description available.scaffold00010-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G29220No description available.scaffold_6+View
EG0004G10350No description available.scaffold_4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G00580No description available.Gm11+View
GM18G12090No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G16130No description available.Chr13+View
GR10G17800No description available.Chr10+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G001040No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G017710No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12753G00120No description available.scaffold12753-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G005670tryptophan synthase beta type 2chr5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G02490No description available.Chr11-View
PT01G42030No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29842G01270No description available.29842-View
RC29666G00660No description available.29666+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G064280Tryptophan synthase beta chain 1 (AHRD V1 **** Q0WUI8_ARATH)%3B contains Interpro domain(s) IPR006654 Tryptophan synthase%2C beta chainch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G006330Tryptophan synthase beta chain 1 (AHRD V1 ***- Q0WUI8_ARATH); contains Interpro domain(s) IPR006654 Tryptophan synthase, beta chainchr10-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G20900No description available.scaffold_6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G00430name=GSVIVG01012644001;chr10+View


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Gene id
Species
Description
Chromosome
Strand