Gene: RC29666G00660 (Ricinus communis)

Overview top

Gene Identifier
RC29666G00660
Transcript Identifier
RC29666G00660.1
Gene Type
Coding gene
Location
29666 : 535627-538640 : positive

Family

Gene family
HOM03D001803
(93 genes in 31 species)
specific family
Subfamily
ORTHO03D011268
(23 genes in 19 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Tryptophan synthase beta chain
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
gene29666.t000067
name29666.m001491

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0006568IEAGenome Projecttryptophan metabolic process
GO:0000162ISOPLAZA Integrative Orthologytryptophan biosynthetic processAT4G27070 AT5G54810
GO:0046219IEAPLAZA Homologyindolalkylamine biosynthetic processHOM03D001803
GO:0006586IEAPLAZA Homologyindolalkylamine metabolic processHOM03D001803
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G54810
GO:0009684ISOPLAZA Integrative Orthologyindoleacetic acid biosynthetic processAT5G54810
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT5G54810

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0030170IEAGenome Projectpyridoxal phosphate binding
GO:0004834IEAGenome Projecttryptophan synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G27070 AT5G54810
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G27070 AT5G54810
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT4G27070
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G54810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006653Tryptophan synthase, beta chain, conserved site
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
IPR006654Tryptophan synthase, beta chain

Mapman id Description
13.1.6.5.5amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
No SignalP domains detected for this gene.