Gene: BR01G17380 (Brassica rapa)

Overview top

Gene Identifier
BR01G17380
Transcript Identifier
BR01G17380.1
Gene Type
Coding gene
Location
A01 : 9638906-9639378 : positive

Family

Gene family
HOM03D001803
(93 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Tryptophan synthase beta chain
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra026381

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006568IEAInterProtryptophan metabolic process
GO:0006979ISOPLAZA Tree-based Orthologyresponse to oxidative stressAT5G54810
GO:0009684ISOPLAZA Tree-based Orthologyindoleacetic acid biosynthetic processAT5G54810
GO:0000162ISOPLAZA Tree-based Orthologytryptophan biosynthetic processAT5G54810 AT4G27070
GO:0009651ISOPLAZA Tree-based Orthologyresponse to salt stressAT5G54810
GO:0046219IEAPLAZA Homologyindolalkylamine biosynthetic processHOM03D001803
GO:0006586IEAPLAZA Homologyindolalkylamine metabolic processHOM03D001803

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004834IEAInterProtryptophan synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009941ISOPLAZA Tree-based Orthologychloroplast envelopeAT4G27070
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT5G54810
GO:0009570ISOPLAZA Tree-based Orthologychloroplast stromaAT5G54810 AT4G27070

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006654Tryptophan synthase, beta chain
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily

Mapman id Description
13.1.6.5.5amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
No SignalP domains detected for this gene.