Anchorpoints

Gene id
AT1G76490
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G17370Encodes a 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) that is involved in the synthesis of sterol and triterpenoid compounds. 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA reductase 2 (HMG2); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: hydroxy methylglutaryl CoA reductase 1 (TAIR:AT1G76490.1); Has 2106 Blast hits to 2105 proteins in 886 species: Archae - 203; Bacteria - 937; Metazoa - 224; Fungi - 225; Plants - 261; Viruses - 1; Other Eukaryotes - 255 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G38110No description available.scaffold_3+View
AL2G25440No description available.scaffold_2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00022G01230No description available.scaffold00022+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G31780No description available.A07+View
BR02G23800No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G04050No description available.Bvchr9.sca025+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G08980No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00096G00160No description available.CM3.5_scaffold00096+View
CM00026G00080No description available.CM3.5_scaffold00026-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G00070No description available.supercontig_26-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G22090No description available.scaffold_2+View
CRU_003G30220No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G07180No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G12730No description available.scaffold_9+View
EG0006G30700No description available.scaffold_6+View
EG0006G14870No description available.scaffold_6-View
EG0009G18510No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G126103-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (HMG-CoA reductase 2) (putative)LG2-View
FV1G117403-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (HMG-CoA reductase 1) (putative)LG1-View
FV5G284903-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (HMG-CoA reductase 1) (putative)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G32850No description available.Gm09-View
GM11G09330No description available.Gm11+View
GM01G36080No description available.Gm01-View
GM16G21620No description available.Gm16+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G21550No description available.Chr05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G009000No description available.2-View
MD10G010330No description available.10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07520G03670No description available.scaffold07520+View
ME06512G02230No description available.scaffold06512+View
ME04047G00030No description available.scaffold04047+View
ME06582G00700No description available.scaffold06582-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G0248803-hydroxy-3-methylglutaryl-coenzyme A reductase-like proteinchr5+View
MT8G0726403-hydroxy-3-methylglutaryl-coenzyme A reductase-like proteinchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G401803-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed 3-hydroxy-3-methylglutaryl-coenzyme A reductase 38+View
OS02G483303-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G19930No description available.scaffold_8+View
PPE_007G20760No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G14500No description available.Chr11+View
PT05G25700No description available.Chr05+View
PT01G45700No description available.Chr01-View
PT02G00400No description available.Chr02-View
PT04G20850No description available.Chr04+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G07400No description available.30170+View
RC30162G00310No description available.30162+View
RC29682G00040No description available.29682+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G032010Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC)%3B contains Interpro domain(s) IPR002202 Hydroxymethylglutaryl-CoA reductase%2C class I/II%2C catalyticch03-View
SL02G082260Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC)%3B contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase%2C class I%2C catalyticch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G008670Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC); contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalytic 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3chr03-View
ST02G025630Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC); contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalyticchr02-View
ST04G0363003-hydroxy-3-methylglutaryl coenzyme A reductase (AHRD V1 **** E5L3S1_9SOLA); contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalyticchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G00200No description available.scaffold_1-View
TC0008G09550No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G31650similar to AT1G76490|HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1)ch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G04710name=GSVIVG01026444001;chr4+View
VV18G12850name=GSVIVG01013435001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G18100No description available.7+View
ZM04G32360No description available.4+View
ZM05G38380No description available.5-View
ZM04G22590No description available.4-View


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Gene id
Species
Description
Chromosome
Strand