Gene: TC0001G00200 (Theobroma cacao)
Overview 
- Gene Identifier
- TC0001G00200
- Transcript Identifier
- TC0001G00200.1
- Gene Type
- Coding gene
- Location
- scaffold_1 : 104092-106798 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
No default description found ...Description of best ortholog(s):

Identifiers
Identifier | Name |
---|
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0015936 | IEA | Genome Project | coenzyme A metabolic process | |
GO:0055114 | IEA | Genome Project | oxidation-reduction process | |
GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
GO:0016126 | ISO | PLAZA Integrative Orthology | sterol biosynthetic process | AT2G17370 |
GO:0016104 | ISO | PLAZA Integrative Orthology | triterpenoid biosynthetic process | AT2G17370 |
GO:0034032 | IEA | PLAZA Homology | purine nucleoside bisphosphate metabolic process | HOM03D001017 |
GO:0051186 | IEA | PLAZA Homology | cofactor metabolic process | HOM03D001017 |
GO:0033865 | IEA | PLAZA Homology | nucleoside bisphosphate metabolic process | HOM03D001017 |
GO:0006732 | IEA | PLAZA Homology | coenzyme metabolic process | HOM03D001017 |
GO:0033875 | IEA | PLAZA Homology | ribonucleoside bisphosphate metabolic process | HOM03D001017 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0004420 | IEA | Genome Project | hydroxymethylglutaryl-CoA reductase (NADPH) activity | |
GO:0050662 | IEA | Genome Project | coenzyme binding | |
GO:0050661 | IEA | InterPro | NADP binding | |
GO:0016616 | IEA | InterPro | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
GO:0016614 | IEA | PLAZA Homology | oxidoreductase activity, acting on CH-OH group of donors | HOM03D001017 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016021 | IEA | InterPro | integral to membrane | |
GO:0043231 | ISO | PLAZA Integrative Orthology | intracellular membrane-bounded organelle | AT2G17370 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR009023 | Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding |
IPR023076 | Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site |
IPR002202 | Hydroxymethylglutaryl-CoA reductase, class I/II |
IPR009029 | Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding |
IPR004554 | Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type |
IPR023282 | Hydroxymethylglutaryl-CoA reductase, N-terminal |
IPR023074 | Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.