Gene: SL02G082260 (Solanum lycopersicum)

Overview top

Gene Identifier
SL02G082260
Transcript Identifier
SL02G082260.1
Gene Type
Coding gene
Location
ch02 : 40528532-40531239 : negative

Family

Gene family
HOM03D001017
(146 genes in 28 species)
specific family
Subfamily
ORTHO03D021726
(6 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC)%3B contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase%2C class I%2C catalytic
Description (AnnoMine)
3-hydroxy-3-methylglutaryl-coenzyme A reductase

Identifiers

Identifier Name
pidSolyc02g082260.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0015936IEAInterProcoenzyme A metabolic process
GO:0008299IEAInterProisoprenoid biosynthetic process
GO:0016126ISOPLAZA Integrative Orthologysterol biosynthetic processAT2G17370 AT1G76490
GO:0016104ISOPLAZA Integrative Orthologytriterpenoid biosynthetic processAT2G17370
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT1G76490
GO:0048235ISOPLAZA Integrative Orthologypollen sperm cell differentiationAT1G76490
GO:0060964ISOPLAZA Integrative Orthologyregulation of gene silencing by miRNAAT1G76490
GO:0019287ISOPLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT1G76490
GO:0034032IEAPLAZA Homologypurine nucleoside bisphosphate metabolic processHOM03D001017
GO:0051186IEAPLAZA Homologycofactor metabolic processHOM03D001017
GO:0033865IEAPLAZA Homologynucleoside bisphosphate metabolic processHOM03D001017
GO:0006732IEAPLAZA Homologycoenzyme metabolic processHOM03D001017
GO:0033875IEAPLAZA Homologyribonucleoside bisphosphate metabolic processHOM03D001017

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042282IEAGenome Projecthydroxymethylglutaryl-CoA reductase activity
GO:0050661IEAInterProNADP binding
GO:0050662IEAInterProcoenzyme binding
GO:0004420IEAInterProhydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G76490
GO:0016614IEAPLAZA Homologyoxidoreductase activity, acting on CH-OH group of donorsHOM03D001017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAGenome Projectintegral to membrane
GO:0043231ISOPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT2G17370
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT1G76490
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G76490
GO:0005789ISOPLAZA Integrative Orthologyendoplasmic reticulum membraneAT1G76490
GO:0009536ISOPLAZA Integrative OrthologyplastidAT1G76490
GO:0005777ISOPLAZA Integrative OrthologyperoxisomeAT1G76490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023282Hydroxymethylglutaryl-CoA reductase, N-terminal
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/II
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site
IPR009023Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
IPR004554Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type

Mapman id Description
16.1.2.3secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase
No SignalP domains detected for this gene.