Functional clusters
Information
- Type
- Mapman term
- Identifier
- 26.11
- Description
- misc.alcohol dehydrogenases
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eucalyptus grandis | scaffold_11 | 17 | CH_egr_507 | 4 | 7 | 0.000000578784 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_647 | 3 | 3 | 0.0000209327 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_648 | 3 | 3 | 0.0000209327 |
Glycine max | Gm01 | 17 | CH_gma_297 | 3 | 3 | 0.0000174054 |
Glycine max | Gm03 | 17 | CH_gma_342 | 3 | 4 | 0.0000695863 |
Glycine max | Gm12 | 17 | CH_gma_127 | 4 | 4 | 0.000000011297 |
Glycine max | Gm14 | 17 | CH_gma_228 | 4 | 10 | 0.0000014197 |
Gossypium raimondii | Chr05 | 17 | CH_gra_148 | 4 | 8 | 0.000000343231 |
Populus trichocarpa | Chr05 | 17 | CH_ptr_324 | 3 | 4 | 0.0000265351 |
Populus trichocarpa | Chr07 | 17 | CH_ptr_149 | 4 | 4 | 0.00000000331714 |
Prunus persica | scaffold_8 | 17 | CH_ppe_213 | 4 | 8 | 0.000000574185 |
Prunus persica | scaffold_8 | 17 | CH_ppe_176 | 4 | 5 | 0.0000000410816 |
Vitis vinifera | chr16 | 17 | CH_vvi_297 | 3 | 3 | 0.0000430463 |
Vitis vinifera | chr4 | 17 | CH_vvi_160 | 4 | 4 | 0.00000004748 |
Vitis vinifera | chr6 | 17 | CH_vvi_346 | 3 | 4 | 0.000172036 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |