Functional clusters
Information
- Type
- Mapman term
- Identifier
- 17.7.1.5
- Description
- hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_19 | 11 | 12 | 9.81285e-34 |
Eucalyptus grandis | scaffold_3 | 18 | CH_egr_21 | 11 | 12 | 9.81285e-34 |
Malus domestica | 10 | 17 | CH_mdo_13 | 6 | 18 | 0.00000000000108028 |
Malus domestica | 15 | 17 | CH_mdo_87 | 4 | 11 | 0.000000231311 |
Oryza sativa ssp. japonica | 6 | 17 | CH_osa_28 | 6 | 9 | 2.34745e-17 |
Populus trichocarpa | Chr13 | 17 | CH_ptr_110 | 4 | 4 | 0.0000000000472004 |
Prunus persica | scaffold_1 | 17 | CH_ppe_15 | 8 | 8 | 1.43473e-25 |
Ricinus communis | 29907 | 17 | CH_rco_161 | 3 | 8 | 0.0000161879 |
Solanum lycopersicum | ch04 | 17 | CH_sly_205 | 3 | 3 | 0.00000059705 |
Solanum lycopersicum | ch11 | 17 | CH_sly_334 | 3 | 10 | 0.0000715557 |
Vitis vinifera | chr18 | 17 | CH_vvi_36 | 7 | 8 | 4.0278e-20 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |