Matrix_40 | TCP2 | Not Available | | 71.22% |
Matrix_144 | AT5G08330; AT5G23280 | Not Available | | 70.61% |
Matrix_22 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 67.95% |
Matrix_266 | TCP16 | Determinants of the DNA binding specificity of class I and class II TCP transcription factors | | 64.23% |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 63.49% |
Matrix_348 | AT5G51910 | Not Available | | 62.90% |
Matrix_130 | TCP16 | Not Available | | 62.90% |
Matrix_369 | AT2G18300 | Not Available | | 62.79% |
Matrix_42 | AT2G45680 | Not Available | | 62.77% |
Matrix_192 | FHY3/FAR1 | Not Available | | 62.66% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 62.60% |
Matrix_11 | TRFL5 | Not Available | | 62.40% |
Matrix_224 | ERF1 | Not Available | | 61.76% |
Matrix_195 | GATA2; GATA4 | Not Available | | 61.47% |
Matrix_287 | ERF2 | Not Available | | 61.09% |
Matrix_176 | MYB98 | Not Available | | 60.95% |
Matrix_373 | E2FE | Not Available | | 60.74% |
Matrix_328 | AT1G76580 | Not Available | | 60.70% |
Motif_219 | E2Fa | The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants | | 60.48% |
Matrix_186 | FHY3 | Not Available | | 60.35% |
Matrix_355 | ERF10; ERF11 | Not Available | | 60.25% |
Matrix_53 | MYC3 | Not Available | | 60.24% |
Matrix_489 | RAV1 | Not Available | | 60.22% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 60.17% |
Matrix_408 | GATA12 | Not Available | | 59.58% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 59.49% |
Matrix_128 | TGA2 | Not Available | | 59.43% |
Matrix_101 | ERF5 | Not Available | | 59.39% |
Matrix_433 | ATERF1 | Not Available | | 59.31% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 59.21% |
Matrix_69 | AT2G03500 | Not Available | | 59.11% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 59.08% |
Matrix_52 | ZAT18 | Not Available | | 59.06% |
Matrix_398 | TBP2; ATTRB2 | Not Available | | 58.93% |
Matrix_311 | TGA1 | Not Available | | 58.72% |
Matrix_507 | TCP3 | Not Available | | 58.71% |
Matrix_113 | ABI5 | Not Available | | 58.69% |
Matrix_226 | GATA1 | Not Available | | 58.58% |
Matrix_286 | GATA7 | Not Available | | 58.58% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 58.58% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 58.41% |
Matrix_277 | RAP2.6 | Not Available | | 58.38% |
Matrix_378 | ATERF1 | Not Available | | 58.37% |
Motif_264 | GCBP2ZMGAPC4 | Binding site of tobacco nuclear factor (GCBP-2) found in the maize GapC4 (Glyceraldehyde-3-phosphate dehydrogenase 4) gene promoter; Located between -293 and -285 | | 58.17% |
Matrix_38 | SPL14 | Not Available | | 58.09% |
Matrix_432 | AT1G77920 | Not Available | | 57.76% |
Motif_232 | ABADESI1 | Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1 | | 57.52% |
Matrix_434 | ARR11 | Not Available | | 57.48% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 57.39% |
Matrix_162 | AtPHR1 | Not Available | | 57.36% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 57.05% |
Matrix_293 | WRKY38 | Not Available | | 57.04% |
Matrix_361 | AT1G25550 | Not Available | | 56.97% |
Matrix_324 | AT2G01060 | Not Available | | 56.95% |
Matrix_363 | RAP2.3 | Not Available | | 56.93% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 56.93% |
Matrix_77 | PRR5 | Not Available | | 56.87% |
Motif_534 | GBOXRELOSAMY3 | G box-related element found in Amy3D (amylase) promoter of rice; Similar to ABRE | | 56.86% |
Matrix_329 | WRKY12 | Not Available | | 56.82% |
Matrix_271 | AT3G16350 | Not Available | | 56.71% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 56.62% |
Matrix_253 | ETT | Not Available | | 56.62% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 56.46% |
Matrix_288 | RAP2.3 | Not Available | | 56.45% |
Matrix_17 | WRKY22 | Not Available | | 56.45% |
Matrix_70 | GATA26 | Not Available | | 56.38% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 56.37% |
Matrix_234 | RAP2.3 | Not Available | | 56.36% |
Matrix_409 | DEAR3 | Not Available | | 56.26% |
Matrix_332 | SPT; ALC | Not Available | | 56.25% |
Matrix_327 | ARR11 | Not Available | | 56.23% |
Matrix_210 | ARR1 | Not Available | | 56.02% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 55.95% |
Matrix_520 | ARR14 | Not Available | | 55.81% |
Matrix_421 | GLK1 | Not Available | | 55.80% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 55.75% |
Matrix_12 | EIN3; EIL2 | Not Available | | 55.74% |
Motif_191 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 55.72% |
Matrix_4 | ARR14 | Not Available | | 55.69% |
Matrix_151 | ASIL1 | Not Available | | 55.62% |
Motif_592 | WRKY43; WRKY38; WRKY26 | Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function | | 55.43% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 55.40% |
Matrix_230 | ARR11 | Not Available | | 55.39% |
Matrix_190 | ATERF1 | Not Available | | 55.37% |
Matrix_75 | WRKY29 | Not Available | | 55.34% |
Matrix_166 | TGA4 | Not Available | | 55.26% |
Matrix_448 | ATERF6 | Not Available | | 55.25% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 55.23% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 55.18% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 55.11% |
Matrix_6 | AT1G70000 | Not Available | | 55.08% |
Matrix_399 | TGA1 | Not Available | | 55.01% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 55.00% |
Matrix_376 | WRKY45 | Not Available | | 54.93% |
Motif_457 | AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 54.87% |
Matrix_203 | GATA9; GATA12 | Not Available | | 54.80% |
Matrix_380 | ATMYR1 | Not Available | | 54.69% |
Matrix_3 | WRKY48 | Not Available | | 54.67% |
Motif_92 | ABREATRD22 | ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22 | | 54.64% |
Matrix_171 | LBD3; LBD4 | Not Available | | 54.63% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 54.62% |
Matrix_265 | NGA3 | Not Available | | 54.59% |
Matrix_193 | RAV1 | Not Available | | 54.59% |
Matrix_308 | INO | Not Available | | 54.59% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 54.52% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 54.38% |
Matrix_25 | AP3 | Not Available | | 54.34% |
Matrix_447 | RVE1 | Not Available | | 54.32% |
Matrix_343 | AT2G33710 | Not Available | | 54.32% |
Matrix_366 | ARR14 | Not Available | | 54.31% |
Matrix_97 | APRR2 | Not Available | | 54.16% |
Matrix_416 | ASL5 | Not Available | | 54.12% |
Matrix_463 | HAT3.1 | Not Available | | 54.04% |
Matrix_85 | SPL5 | Not Available | | 54.03% |
Matrix_252 | RAP2.6 | Not Available | | 54.01% |
Matrix_141 | AT3G25990 | Not Available | | 53.95% |
Matrix_272 | DEAR4 | Not Available | | 53.93% |
Matrix_236 | CCA1 | Not Available | | 53.92% |
Matrix_37 | GATA27 | Not Available | | 53.86% |
Matrix_146 | ORA47 | Not Available | | 53.84% |
Matrix_387 | ORA47 | Not Available | | 53.83% |
Matrix_282 | bZIP60 | Not Available | | 53.77% |
Motif_619 | SITEIIBOSPCNA | Site IIb of rice PCNA (proliferating cell nuclear antigen) gene; Found at -178 to -169; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes | | 53.76% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 53.75% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 53.67% |
Matrix_92 | AT1G33760 | Not Available | | 53.57% |
Matrix_505 | GATA8 | Not Available | | 53.50% |
Matrix_237 | MYB55 | Not Available | | 53.48% |
Matrix_504 | WRKY40 | Not Available | | 53.48% |
Matrix_406 | ATERF-7 | Not Available | | 53.44% |
Matrix_91 | CRF3 | Not Available | | 53.38% |
Matrix_465 | MYC4 | Not Available | | 53.37% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 53.37% |
Matrix_384 | ATWRKY17 | Not Available | | 53.31% |
Matrix_482 | AT2G25650; AT4G00270 | Not Available | | 53.29% |
Matrix_446 | LBD16 | Not Available | | 53.28% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 53.26% |
Matrix_227 | AT1G64620 | Not Available | | 53.25% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 53.23% |
Matrix_473 | RRTF1 | Not Available | | 53.20% |
Motif_402 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 53.20% |
Motif_281 | ABRE3OSRAB16 | ABA-responsive element of rice rab16 and alpha-amylase genes | | 53.19% |
Matrix_350 | ARR14 | Not Available | | 53.17% |
Matrix_216 | TCP16 | Not Available | | 53.14% |
Matrix_330 | MYC2; TT8 | Not Available | | 53.14% |
Matrix_472 | ZN_C2_H2 | Not Available | | 53.09% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 53.08% |
Matrix_106 | AT5G47390 | Not Available | | 53.05% |
Matrix_120 | BEE2 | Not Available | | 52.99% |
Matrix_157 | LHY; RVE2 | Not Available | | 52.91% |
Matrix_261 | ATERF-1 | Not Available | | 52.88% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 52.82% |
Matrix_453 | EIL3 | Not Available | | 52.78% |
Matrix_323 | BIM3 | Not Available | | 52.76% |
Matrix_502 | AT3G13040 | Not Available | | 52.70% |
Matrix_336 | AT5G08520 | Not Available | | 52.70% |
Matrix_449 | BIM2 | Not Available | | 52.68% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 52.58% |
Matrix_67 | GLK1 | Not Available | | 52.56% |
Matrix_413 | RAV1 | Not Available | | 52.54% |
Matrix_298 | RAV1 | Not Available | | 52.54% |
Matrix_138 | RRTF1 | Not Available | | 52.52% |
Matrix_122 | ABF1; AREB2 | Not Available | | 52.46% |
Matrix_397 | GT2L | Not Available | | 52.41% |
Matrix_61 | ATCBF3 | Not Available | | 52.39% |
Matrix_87 | AT1G19000 | Not Available | | 52.28% |
Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 52.26% |
Matrix_264 | ATAREB1 | Not Available | | 52.26% |
Matrix_290 | AP2 | Not Available | | 52.20% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 52.19% |
Matrix_119 | RRTF1 | Not Available | | 52.19% |
Motif_468 | WRKY43; WRKY38; WRKY26 | Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function | | 52.18% |
Motif_282 | D4GMAUX28 | D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes | | 52.09% |
Matrix_389 | ILR3 | Not Available | | 52.05% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 52.01% |
Matrix_84 | AtGRF6 | Not Available | | 51.99% |
Motif_82 | ACGTSEED3 | ACGT motif related to seed expression; Gene: synthetic; wild-type motif (Iwt) containing G-box-related sequence; transacting factor: bZIP; A tobacco bZip transcription activator (TAF-1) binding site | | 51.86% |
Matrix_333 | GATA3 | Not Available | | 51.84% |
Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 51.84% |
Matrix_281 | TCP13 | Not Available | | 51.83% |
Matrix_228 | TGA2 | Not Available | | 51.76% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 51.65% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 51.61% |
Motif_50 | AtERF-7; AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses | | 51.46% |
Matrix_462 | ATERF-8 | Not Available | | 51.44% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 51.42% |
Matrix_46 | AT4G21895 | Not Available | | 51.40% |
Matrix_33 | SPL11; SPL10; SPL2 | Not Available | | 51.31% |
Matrix_452 | MYB46 | Not Available | | 51.25% |
Motif_650 | SITEIIAOSPCNA | Site IIa of rice PCNA (proliferating cell nuclear antigen) gene; Found at -197 to -188; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes; See AUXREPSIAA4 | | 51.20% |
Matrix_187 | CDC5 | Not Available | | 51.09% |
Matrix_349 | CDC5 | Not Available | | 51.09% |
Matrix_321 | HRD | Not Available | | 51.00% |
Matrix_415 | WRKY27 | Not Available | | 50.99% |
Matrix_360 | ORA59 | Not Available | | 50.99% |
Matrix_423 | AT3G04030 | Not Available | | 50.98% |
Matrix_102 | WRKY21 | Not Available | | 50.95% |
Matrix_220 | WRKY18 | Not Available | | 50.91% |
Matrix_427 | ZAT14 | Not Available | | 50.84% |
Matrix_244 | DREB2C | Not Available | | 50.64% |
Matrix_169 | E2F1 | Not Available | | 50.63% |
Matrix_93 | YAB5 | Not Available | | 50.48% |
Matrix_181 | Dof5.7 | Not Available | | 50.47% |
Matrix_438 | AtbZIP63 | Not Available | | 50.45% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 50.42% |
Motif_31 | UPRE1AT | ERSEII-like sequence found in the plant UPRE (unfolded protein response element) in Arabidopsis thaliana; Either of ERSEII or XBP1 binding sites is essential and sufficient for the UPR | | 50.36% |
Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 50.33% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 50.32% |
Matrix_420 | ANAC58 | Not Available | | 50.30% |
Matrix_153 | AP2 | Not Available | | 50.02% |