PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_456
Name: bZIP60
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_282	bZIP60	Not Available	79.94%
Matrix_228	TGA2	Not Available	77.44%
Matrix_116	ANAC55	Not Available	77.08%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	76.76%
Matrix_323	BIM3	Not Available	75.83%
Matrix_449	BIM2	Not Available	75.60%
Matrix_120	BEE2	Not Available	74.56%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	74.55%
Matrix_23	ANAC46	Not Available	74.28%
Matrix_330	MYC2; TT8	Not Available	73.44%
Motif_107	O2F2BE2S1	opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome	73.17%
Matrix_420	ANAC58	Not Available	73.10%
Matrix_465	MYC4	Not Available	73.04%
Matrix_389	ILR3	Not Available	72.66%
Matrix_273	ANAC55	Not Available	72.63%
Matrix_139	OBF5	Not Available	72.27%
Matrix_129	ABF1	Not Available	72.02%
Matrix_300	bZIP68; bZIP16	Not Available	71.11%
Motif_67	LS5ATPR1	LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors	70.88%
Matrix_247	PIF3	Not Available	70.74%
Motif_399	UPRMOTIFIAT	Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc.	70.62%
Motif_406	ABREBZMRAB28	ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	69.95%
Matrix_278	AtbZIP44	Not Available	69.84%
Matrix_296	GBF2	Not Available	69.38%
Motif_374	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	68.85%
Matrix_393	REM1	Not Available	67.83%
Matrix_438	AtbZIP63	Not Available	67.54%
Matrix_14	ZCW32; AT5G62610	Not Available	67.47%
Motif_237	O2F1BE2S1	opaque-2 recognition site F1 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F1 is hybrid C/G box	67.17%
Motif_162	ABRE3HVA22	ABRE3 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; ABA response complex 1(ABRC1)=A3(previously designated ABRE3)+CE1	66.75%
Matrix_332	SPT; ALC	Not Available	66.35%
Motif_680	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	66.25%
Motif_2	ACGTSEED2	ACGT motif related to seed expression; Gene: French bean phaseolin; transacting factor: 02	65.71%
Motif_128	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	65.71%
Motif_95	UPRE2AT	XBP1 binding site-like sequence found in the plant UPRE (unfolded protein response element) in Arabidopsis thaliana;Either of ERSEII or XBP1 binding sites is essential and sufficient for the UPR	65.61%
Matrix_331	GBF1	Not Available	65.60%
Matrix_288	RAP2.3	Not Available	65.57%
Matrix_128	TGA2	Not Available	65.35%
Matrix_437	MYC2	Not Available	65.17%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	65.04%
Matrix_339	bHLH104	Not Available	65.01%
Matrix_432	AT1G77920	Not Available	65.00%
Motif_300	ACGTROOT1; HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. ACGT motif related to root expression; Gene: synthetic; perfect palindromic sequence (PA) containing G-box-related sequence; transacting factor: TAF-1; Binding of SGBF-1 (a Soybean G-box binding bZIP transcription factor) to ABRE is enhanced by SCOF-1 (a zinc finger protein ); Transcription of SCOF-1 is induced by low temperature and ABA	64.98%
Motif_112	GBOX10NT	One of 11 G-box sequences in tobacco; Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen	64.93%
Matrix_50	ATERF14; AT5G43410	Not Available	64.67%
Matrix_7	PIF4	Not Available	64.61%
Matrix_233	MYC3	Not Available	64.44%
Matrix_20	ANAC030; NST1; NAC066	Not Available	64.25%
Matrix_122	ABF1; AREB2	Not Available	64.24%
Motif_528	ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	64.05%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	64.00%
Matrix_409	DEAR3	Not Available	63.89%
Matrix_173	ZAP1	Not Available	63.70%
Matrix_311	TGA1	Not Available	63.68%
Matrix_385	DEAR4	Not Available	63.56%
Matrix_244	DREB2C	Not Available	63.33%
Matrix_138	RRTF1	Not Available	63.01%
Matrix_260	CAMTA3	Not Available	62.87%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	62.83%
Matrix_166	TGA4	Not Available	62.72%
Matrix_394	DREB_U	Not Available	62.70%
Matrix_320	MYC4	Not Available	62.69%
Matrix_355	ERF10; ERF11	Not Available	62.56%
Motif_400	ABREAZMRAB28	ABA-responsive element (ABRE A) found at -148 to -139 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	62.48%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	62.43%
Matrix_150	UNE10; PIF7	Not Available	62.24%
Matrix_369	AT2G18300	Not Available	62.18%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	62.12%
Matrix_109	GBF3	Not Available	61.99%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	61.93%
Motif_252	GBOXPC	G box; Binding site of parsley cytosolic G-box binding factors (cytosolic GBFs); Cytosolic G-Box binding activity is modulated by light; DNA binding activity of cytosolic GBFs is regulated by cytosolic phosphorylation/dephospholylation activities; Cytosolic GBFs are translocated to the nucleus in a light-regulated manner	61.84%
Motif_599	LREBOXIIPCCHS1; HY5	BoxII; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; Highly conserved in various light inducible gene promoters; Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	61.79%
Motif_498	SGBFGMGMAUX28	bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoter	61.69%
Matrix_363	RAP2.3	Not Available	61.68%
Motif_56	O2F3BE2S1	opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box	61.51%
Motif_571	GBOXSORBCS1	G-box found in the spinach RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots	61.51%
Matrix_1	TOE2	Not Available	61.48%
Matrix_476	bHLH115; bHLH34	Not Available	61.27%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	61.24%
Motif_197	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	61.16%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	60.98%
Matrix_422	TOE1	Not Available	60.94%
Motif_177	-300MOTIFZMZEIN	Motif in -300 elements of alpha-zein genes of maize; homologous to the sequence to which transacting factors of AP-1, fos, jun or yeast hisS bind	60.89%
Matrix_151	ASIL1	Not Available	60.83%
Matrix_448	ATERF6	Not Available	60.78%
Matrix_322	NST3; ANAC015; BRN2	Not Available	60.76%
Matrix_259	AT1G50680; AT1G51120	Not Available	60.68%
Motif_542	ABI5; AtMYC2; HY5	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	60.64%
Matrix_119	RRTF1	Not Available	60.61%
Motif_518	SPHCOREZMC1	Core of Sph element; Core motif of Sph element in maize C1 gene to which maize VP1 (viviparous 1) protein binds; VP1-responsive element; see RYREPEAT4; VP1 gene is specifically required for expression of the maturation program in seed development; VP1 is a novel transcription factor possibly involved in potentiation of a seed-specific hormone response	60.53%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	60.49%
Matrix_135	ABI3	Not Available	60.05%
Matrix_61	ATCBF3	Not Available	60.04%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	59.87%
Matrix_480	BES1	Not Available	59.85%
Matrix_171	LBD3; LBD4	Not Available	59.80%
Matrix_60	AT1G01260; AT5G57150	Not Available	59.69%
Matrix_472	ZN_C2_H2	Not Available	59.68%
Matrix_92	AT1G33760	Not Available	59.48%
Matrix_4	ARR14	Not Available	59.45%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	59.39%
Motif_200	GBOXLERBCS	G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF	59.34%
Matrix_57	WIN1; SHN3; SHN2	Not Available	59.16%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	59.07%
Matrix_210	ARR1	Not Available	59.06%
Matrix_156	POC1	Not Available	59.00%
Motif_202	OPAQUE2ZM22Z	Opaque-2 (O2) target sequence in maize 22- and 27-kD zein promoters; ACGT motif; Related to seed expression; O2 target sequence; Gene: maize 22-kD zein; transacting factor: 02	58.97%
Matrix_224	ERF1	Not Available	58.94%
Matrix_388	SNZ; SMZ; TOE2	Not Available	58.84%
Matrix_141	AT3G25990	Not Available	58.82%
Matrix_174	ZAT2	Not Available	58.76%
Matrix_433	ATERF1	Not Available	58.64%
Matrix_509	LEC2	Not Available	58.56%
Matrix_145	GBF4; AT5G44080	Not Available	58.50%
Matrix_80	BIM1	Not Available	58.23%
Matrix_292	FTQ4	Not Available	58.21%
Motif_665	ACEATCHS	ACEAtCHS (ACGT containing element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-1/blue light responsiveness; Transcriptional repression by AtMYB4 controls production of UV-protecting sun screens in Arabidopsis; AtMYB4 mutant shows enhanced levels of sinapate ester in leaves and tolerance of UV-B irradiation; AtMYB4 expression is downregulated by exposure to UV-B light; Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	57.82%
Matrix_9	AT5G04760	Not Available	57.81%
Matrix_59	AT4G00238; AT4G00250	Not Available	57.79%
Motif_89	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	57.65%
Motif_512	GLMHVCHORD	GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter	57.58%
Motif_617	ABRE3HVA1	ABA responsive element, ABRE3, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	57.24%
Motif_74	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	57.20%
Matrix_281	TCP13	Not Available	57.20%
Matrix_55	PIF3	Not Available	57.17%
Motif_265	GCAACREPEATZMZEIN	GCAAC repeat found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize; GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb	57.16%
Matrix_188	SPL4	Not Available	57.09%
Matrix_97	APRR2	Not Available	57.05%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	56.96%
Matrix_258	WOX13	Not Available	56.88%
Matrix_261	ATERF-1	Not Available	56.73%
Matrix_79	FUS3	Not Available	56.68%
Matrix_399	TGA1	Not Available	56.63%
Motif_644	ABREDISTBBNNAPA	dist B (distal portion of B-box) found in napA gene of Brassica napus; Shows similarity to ABRE; Found between -148 and -124; Required for seed specific expression and ABA responsiveness;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE	56.52%
Motif_124	ABREMOTIFIIIOSRAB16B	Motif III found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	56.30%
Motif_625	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	56.29%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	56.22%
Matrix_374	AT5G07580; AT5G61590	Not Available	56.16%
Motif_418	ABRE2HVA22	ABRE2 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; see ABRE3 of HVA22 gene; see CE1 (coupling element 1 = TGCCACCGG)	56.11%
Matrix_104	PI	Not Available	56.03%
Motif_620	DREB1&2 BS in rd29a	Related to responsiveness to drought, low-temperature or high-salt stress; Binding site of DREB1 and DREB2: Binding site of Arabidopsis CBF1(C-repeat/DRE binding factor); Overexpression of DREB1A activated the expression of stress tolerance genes; CBF1 overexpression induces COR genes and enhances freezing tolerance; Heterologous CBF1 expression enhances oxidative stresses tolerance; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis;Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor	55.91%
Matrix_346	AtMYB70; MYB73	Not Available	55.83%
Matrix_134	ABF1	Not Available	55.81%
Matrix_193	RAV1	Not Available	55.81%
Matrix_265	NGA3	Not Available	55.81%
Matrix_452	MYB46	Not Available	55.75%
Matrix_253	ETT	Not Available	55.74%
Matrix_277	RAP2.6	Not Available	55.70%
Motif_473	ABREOSRGA1	ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia	55.66%
Matrix_113	ABI5	Not Available	55.65%
Matrix_111	ABF3	Not Available	55.63%
Matrix_421	GLK1	Not Available	55.63%
Matrix_321	HRD	Not Available	55.61%
Matrix_70	GATA26	Not Available	55.54%
Matrix_64	PIF5	Not Available	55.47%
Motif_19	AAGACGTAGATACL12	Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT)	55.30%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	55.28%
Matrix_69	AT2G03500	Not Available	55.20%
Matrix_221	SPL7	Not Available	55.18%
Matrix_204	WOX13	Not Available	55.14%
Matrix_344	ATERF15; AT4G18450	Not Available	55.12%
Matrix_352	LEC2	Not Available	55.02%
Motif_453	HEXMOTIFTAH3H4	hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site	54.97%
Matrix_373	E2FE	Not Available	54.92%
Motif_362	TGA2 octamer	palindromic octamer found enriched in chip-chip regions for TGA2	54.86%
Matrix_491	AT1G68670; AT3G25790	Not Available	54.84%
Matrix_475	AT5G64220	Not Available	54.77%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	54.75%
Motif_311	ANAC019; ANAC055; ANAC072	Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter	54.66%
Matrix_484	ATERF13	Not Available	54.64%
Motif_22	RYREPEATLEGUMINBOX	RY repeat (CATGCAY) or legumin box found in seed-storage protein genes in legume such as soybean	54.61%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	54.57%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	54.52%
Matrix_460	NAM; anac025; ATNAC2	Not Available	54.49%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	54.47%
Matrix_493	AT1G22985; AT1G71130	Not Available	54.26%
Matrix_16	AT3G04450; PHL1	Not Available	54.14%
Matrix_27	ATAIB; ATNIG1	Not Available	54.09%
Matrix_186	FHY3	Not Available	54.04%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	54.03%
Matrix_91	CRF3	Not Available	53.97%
Matrix_41	anac058	Not Available	53.95%
Matrix_333	GATA3	Not Available	53.91%
Matrix_162	AtPHR1	Not Available	53.79%
Matrix_336	AT5G08520	Not Available	53.74%
Matrix_153	AP2	Not Available	53.66%
Matrix_147	ERF3; AT1G80580	Not Available	53.63%
Matrix_114	EPR1; AT3G10113	Not Available	53.60%
Matrix_94	TCP5	Not Available	53.60%
Motif_53	ABREA2HVA1	A2 of ABRC3; ABRC3 (ABA response complex 3) of HVA1 consists of CE3 and A2; ABA responsive element; stress response; Found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant (Lea) protein; ABRC1 OF HVA22 consists of CE1 and A3	53.59%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	53.59%
Matrix_450	SPL7	Not Available	53.59%
Matrix_324	AT2G01060	Not Available	53.37%
Motif_310	ANAERO3CONSENSUS	One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curator	53.37%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	53.35%
Matrix_45	DRN	Not Available	53.34%
Matrix_178	HSFB2A	Not Available	53.29%
Matrix_307	RGL2; RGL3	Not Available	53.23%
Matrix_272	DEAR4	Not Available	53.18%
Matrix_406	ATERF-7	Not Available	53.07%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	53.00%
Motif_535	ACIPVPAL2	ACI element found at -83 to -74 of bean PAL2 promoter; AC-rich element; ACI element is required for vascular-specific gene expression; See also ACIIPVPAL2 and ACIIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissue-specific expression of pAL2 gene	52.98%
Matrix_361	AT1G25550	Not Available	52.98%
Matrix_234	RAP2.3	Not Available	52.97%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	52.95%
Matrix_157	LHY; RVE2	Not Available	52.89%
Matrix_343	AT2G33710	Not Available	52.89%
Matrix_143	GATA14; GATA6; GATA5	Not Available	52.74%
Matrix_53	MYC3	Not Available	52.66%
Matrix_436	AT3G49930; AZF1	Not Available	52.63%
Matrix_115	AGL15	Not Available	52.58%
Motif_244	ABRE-like binding site motif	Not Available	52.56%
Motif_402	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	52.54%
Matrix_86	CRF5; CRF6; CRF4	Not Available	52.48%
Matrix_294	MEE35	Not Available	52.48%
Matrix_319	TEM1	Not Available	52.40%
Motif_573	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	52.37%
Matrix_101	ERF5	Not Available	52.34%
Matrix_478	AT1G01250	Not Available	52.32%
Matrix_362	DEAR3	Not Available	52.31%
Matrix_295	ERF1	Not Available	52.24%
Matrix_137	SPL1; SPL12	Not Available	52.13%
Matrix_8	KAN1	Not Available	52.12%
Matrix_426	CRF1; CRF2	Not Available	52.12%
Matrix_379	RHL41	Not Available	52.04%
Matrix_159	TEM2	Not Available	52.01%
Matrix_198	STZ; C2H2; AZF3	Not Available	51.95%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	51.90%
Motif_33	ACGTCBOX	C-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding site	51.90%
Matrix_46	AT4G21895	Not Available	51.89%
Matrix_196	TCP20; AT5G41030	Not Available	51.88%
Matrix_490	AtMYB77; ATMYB44	Not Available	51.84%
Matrix_387	ORA47	Not Available	51.84%
Motif_291	ABFs binding site motif	Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element	51.84%
Matrix_167	ZAT6	Not Available	51.81%
Matrix_77	PRR5	Not Available	51.77%
Matrix_462	ATERF-8	Not Available	51.76%
Matrix_65	POC1; PIL1	Not Available	51.74%
Matrix_473	RRTF1	Not Available	51.68%
Matrix_5	AT5G51190; ERF104	Not Available	51.60%
Matrix_503	AT2G37430; AT3G53600	Not Available	51.57%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	51.57%
Motif_212	GARE2OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	51.56%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	51.56%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	51.50%
Matrix_287	ERF2	Not Available	51.43%
Matrix_206	CUC1; ANAC100	Not Available	51.42%
Matrix_291	EDF3	Not Available	51.40%
Matrix_26	ATMYB3; MYB24	Not Available	51.39%
Motif_251	SUP	The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif	51.38%
Motif_544	CACGCAATGMGH3	Sequence found in D4 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear protein	51.36%
Matrix_82	TCP17	Not Available	51.36%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	51.28%
Matrix_308	INO	Not Available	51.26%
Matrix_87	AT1G19000	Not Available	51.21%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	51.16%
Matrix_170	AT5G47660	Not Available	51.16%
Matrix_360	ORA59	Not Available	51.12%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	51.11%
Motif_421	TAC1	Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1	51.09%
Motif_598	SORLIP3AT	one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	51.05%
Motif_132	PIATGAPB	PI found in the Arabidopsis thaliana GAPB gene promoter; Located between -157 and -150; Mutations in the PI resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana	50.97%
Matrix_126	RBE	Not Available	50.95%
Matrix_146	ORA47	Not Available	50.91%
Motif_80	AP1SV40	AP-1 binding site in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)	50.87%
Matrix_469	NAC041; NAC083	Not Available	50.84%
Matrix_378	ATERF1	Not Available	50.82%
Matrix_212	ATHB-12	Not Available	50.82%
Motif_444	OCTAMOTIF2	Octamer motif found in histone-gene-specific consensus sequences; 200 base upstream from the initiation codon ATG; Exist in all of seven plant histone genes	50.80%
Matrix_37	GATA27	Not Available	50.79%
Matrix_274	EDF3	Not Available	50.78%
Matrix_190	ATERF1	Not Available	50.77%
Matrix_255	cdf3	Not Available	50.77%
Matrix_479	TOE1	Not Available	50.73%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	50.72%
Matrix_334	AT3G23230	Not Available	50.72%
Motif_199	GCN4OSGLUB1	GCN4 motif found in GluB-1 gene in rice; Required for endosperm-specific expression; AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression; This motif is the recognition site for a basic leucine zipper transcription factor that belongs to the group of maize Opaque-2 (O2)-like proteins; Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating the gene expression	50.71%
Matrix_506	DRNL; ATERF-4	Not Available	50.70%
Motif_585	ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH	PRE (Pro- or hypoosmolarity-responsive element) found in the promoter region of proline dehydrogenase (ProDH) gene in Arabidopsis; Core of 9-bp sequence ACTCATCCT which is necessary for the efficient expression of ProDH in response to L-Pro and hypoosmolarity; ATB2-binding site; Similar to GCN4 motif (ATGA(C/G)TCAT); ATB2 subgroup of bZIP transcription factors function as transcriptional activator for hypoosmolarity-inducible ProDH; A Novel Subgroup of bZIP Proteins Functions as Transctiptional Activators in Hypsosmolarity-Responsive Expression of the ProDH gene in Arabidopsis	50.67%
Motif_120	ABRETAEM	ABRE (ABA responsive element) found in wheat Em gene; transacting factor: EMBP-1; EMBP-1 binds to CACGTGGC	50.64%
Matrix_440	LFY	Not Available	50.63%
Motif_516	BZIP12; ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	50.62%
Motif_511	RYREPEATGMGY2	RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2)	50.57%
Matrix_446	LBD16	Not Available	50.55%
Matrix_239	AT5G04390	Not Available	50.52%
Matrix_354	AHL12	Not Available	50.51%
Matrix_264	ATAREB1	Not Available	50.45%
Matrix_328	AT1G76580	Not Available	50.37%
Matrix_181	Dof5.7	Not Available	50.33%
Matrix_457	TGA2	Not Available	50.32%
Motif_392	PALBOXAPC	Box A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box L	50.13%
Matrix_81	YAB1	Not Available	50.11%
Motif_4	NAP	An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves	50.10%
Matrix_84	AtGRF6	Not Available	50.07%
Matrix_93	YAB5	Not Available	50.00%