Binding site page : Motif_199


Identifier
Motif_199
Name
GCN4OSGLUB1
Description
GCN4 motif found in GluB-1 gene in rice; Required for endosperm-specific expression; AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression; This motif is the recognition site for a basic leucine zipper transcription factor that belongs to the group of maize Opaque-2 (O2)-like proteins; Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating the gene expression
Number of genes
1573
Sequence
TGAGTCA
Positional Weight Matrix

Binding site distribution per species

Upstream data    Downstream data    Intron data    All data

Binding site distribition per location

Toolbox

Explore

  • ... associated Gene Ontology annotation of this binding site.
  • ... associated InterPro annotation of this binding site.
  • ... associated MapMan annotation of this binding site.

View

 

Gene List

Index of genes with 1 constraints:

Page 1 of 79, showing 20 records out of 1573 total, starting on record 1, ending on 20

gene_id species strand chr type
GM01G00930 gma + Gm01 coding
GM01G04190 gma + Gm01 coding
GM01G09510 gma + Gm01 coding
GM01G19420 gma + Gm01 coding
GM01G25270 gma - Gm01 coding
GM01G40370 gma + Gm01 coding
GM01G41100 gma - Gm01 coding
GM02G08460 gma - Gm02 coding
GM02G36510 gma + Gm02 coding
GM03G31281 gma - Gm03 coding
GM03G37320 gma - Gm03 coding
GM03G42455 gma + Gm03 coding
GM04G41740 gma - Gm04 coding
GM05G04900 gma - Gm05 coding
GM05G05050 gma - Gm05 coding
GM05G22860 gma + Gm05 coding
GM05G29610 gma - Gm05 coding
GM05G35461 gma - Gm05 coding
GM05G35940 gma - Gm05 coding
GM05G36100 gma - Gm05 coding

Download genes (select columns to include)

gene_id
species
strand
chr
type