PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_376
Name: WRKY45
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_293	WRKY38	Not Available	90.83%
Matrix_329	WRKY12	Not Available	87.99%
Motif_325	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	67.75%
Motif_436	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	67.38%
Matrix_253	ETT	Not Available	66.77%
Motif_413	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	65.15%
Motif_337	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.99%
Motif_205	WRKY43; WRKY38; WRKY26; WRKY11	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.99%
Motif_596	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.99%
Motif_386	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.99%
Motif_557	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.95%
Motif_135	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.66%
Motif_430	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	64.18%
Matrix_9	AT5G04760	Not Available	64.01%
Matrix_240	AT4G29000	Not Available	63.28%
Motif_500	D1GMAUX28	D1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes; Binding site of GmGT-2 which is the GT-2 family of transcription factors; GmGT-2 are down-regulated by light in a phytochrome-dependent manner	63.26%
Matrix_52	ZAT18	Not Available	63.10%
Motif_348	WBBOXPCWRKY1	WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in Arabidopsis	62.73%
Matrix_409	DEAR3	Not Available	62.09%
Matrix_92	AT1G33760	Not Available	62.05%
Motif_524	WRKY40; WRKY62; WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factors	61.74%
Matrix_175	Dof5.7	Not Available	61.59%
Motif_363	WRKY26	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	61.01%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	60.49%
Matrix_249	WRKY11	Not Available	60.14%
Motif_378	WRKY6	Targets of AtWRKY6 regulation during plant senescence and pathogen defense	59.98%
Matrix_50	ATERF14; AT5G43410	Not Available	59.71%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	59.70%
Matrix_61	ATCBF3	Not Available	59.15%
Motif_641	LRENPCABE	LRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241	58.95%
Matrix_500	WRKY43	Not Available	58.75%
Matrix_187	CDC5	Not Available	58.74%
Matrix_349	CDC5	Not Available	58.74%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	58.35%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	58.20%
Motif_630	WBOXNTCHN48	W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobacco	58.05%
Matrix_355	ERF10; ERF11	Not Available	58.00%
Matrix_385	DEAR4	Not Available	57.87%
Matrix_176	MYB98	Not Available	57.84%
Motif_587	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	57.83%
Matrix_38	SPL14	Not Available	57.79%
Matrix_12	EIN3; EIL2	Not Available	57.46%
Matrix_394	DREB_U	Not Available	57.38%
Matrix_431	ATHB21; HB-3	Not Available	57.34%
Matrix_70	GATA26	Not Available	57.22%
Matrix_427	ZAT14	Not Available	57.21%
Motif_621	bZIP23; bZIP19	Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency	57.17%
Motif_203	bZIP23; bZIP19	Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency	57.10%
Motif_227	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	56.97%
Motif_121	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	56.90%
Matrix_450	SPL7	Not Available	56.76%
Motif_191	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	56.60%
Matrix_415	WRKY27	Not Available	56.58%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	56.39%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	56.37%
Matrix_448	ATERF6	Not Available	56.21%
Motif_376	WRKY63	ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis	56.16%
Matrix_493	AT1G22985; AT1G71130	Not Available	56.10%
Motif_592	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	55.94%
Matrix_244	DREB2C	Not Available	55.83%
Matrix_382	AT3G04850	Not Available	55.68%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	55.67%
Matrix_470	WRKY18	Not Available	55.62%
Motif_390	GLUTEBOX2OSGT2	Box II of rice glutelin Gt2 gene family; nuclear factor binding site	55.51%
Motif_468	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	55.38%
Matrix_288	RAP2.3	Not Available	55.22%
Matrix_260	CAMTA3	Not Available	55.07%
Motif_167	SBP-box promoter motif	Molecular characterisation of the Arabidopsis SBP-box genes	55.01%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	54.95%
Matrix_197	NAP	Not Available	54.93%
Matrix_75	WRKY29	Not Available	54.93%
Motif_491	GT-1	Molecular dissection of GT-1 from Arabidopsis	54.90%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	54.84%
Matrix_151	ASIL1	Not Available	54.76%
Matrix_494	OBP4	Not Available	54.73%
Motif_270	ELRECOREPCRP1	ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in Arabidopsis	54.69%
Matrix_367	REM1	Not Available	54.51%
Matrix_495	HD-GL2-1; ANL2	Not Available	54.47%
Matrix_3	WRKY48	Not Available	54.42%
Matrix_97	APRR2	Not Available	54.32%
Matrix_17	WRKY22	Not Available	54.30%
Matrix_91	CRF3	Not Available	54.21%
Matrix_37	GATA27	Not Available	54.08%
Matrix_54	AHL20	Not Available	53.96%
Matrix_170	AT5G47660	Not Available	53.94%
Matrix_433	ATERF1	Not Available	53.86%
Matrix_421	GLK1	Not Available	53.82%
Matrix_224	ERF1	Not Available	53.82%
Matrix_370	WRKY50; WRKY51	Not Available	53.75%
Matrix_220	WRKY18	Not Available	53.72%
Matrix_457	TGA2	Not Available	53.61%
Matrix_1	TOE2	Not Available	53.59%
Motif_467	VOZ binding site	Not Available	53.56%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	53.54%
Matrix_390	GT-1	Not Available	53.49%
Matrix_482	AT2G25650; AT4G00270	Not Available	53.46%
Matrix_26	ATMYB3; MYB24	Not Available	53.43%
Matrix_59	AT4G00238; AT4G00250	Not Available	53.42%
Matrix_321	HRD	Not Available	53.41%
Motif_627	ACGTABREMOTIFA2OSEM	Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis	53.20%
Matrix_363	RAP2.3	Not Available	53.19%
Matrix_138	RRTF1	Not Available	53.05%
Matrix_384	ATWRKY17	Not Available	52.96%
Matrix_261	ATERF-1	Not Available	52.88%
Matrix_422	TOE1	Not Available	52.87%
Matrix_32	AHL25	Not Available	52.69%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	52.58%
Matrix_473	RRTF1	Not Available	52.51%
Matrix_378	ATERF1	Not Available	52.40%
Matrix_483	ICU4	Not Available	52.30%
Matrix_102	WRKY21	Not Available	52.30%
Matrix_513	SOL1; TSO1; TCX2	Not Available	52.28%
Matrix_148	WRKY60	Not Available	52.22%
Matrix_517	ERF12	Not Available	52.13%
Motif_450	E2FCONSENSUS	E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants	52.11%
Matrix_336	AT5G08520	Not Available	52.05%
Matrix_492	ETT	Not Available	51.97%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	51.97%
Matrix_230	ARR11	Not Available	51.96%
Motif_72	GADOWNAT	Sequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABRE	51.86%
Motif_558	BOXIIPCCHS	Core of Box II/G box found in the parsley chs genes; Essential for light regulation	51.85%
Matrix_84	AtGRF6	Not Available	51.72%
Matrix_85	SPL5	Not Available	51.68%
Matrix_426	CRF1; CRF2	Not Available	51.67%
Matrix_455	MYB111	Not Available	51.66%
Matrix_374	AT5G07580; AT5G61590	Not Available	51.64%
Matrix_53	MYC3	Not Available	51.63%
Matrix_371	MYB7; AtMYB6; AtMYB32; ATMYB4	Not Available	51.62%
Matrix_234	RAP2.3	Not Available	51.56%
Matrix_76	GATA10	Not Available	51.53%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	51.49%
Matrix_489	RAV1	Not Available	51.42%
Matrix_180	SPL1	Not Available	51.38%
Matrix_505	GATA8	Not Available	51.24%
Matrix_299	PFG3	Not Available	51.23%
Motif_683	AtMYB2 BS in RD22	Binding site for MYB (ATMYB2) in dehydration-responsive gene, rd22; MYB binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -141 of rd22 gene; Also MYC at ca. -200 of rd22 gene; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression	51.19%
Matrix_265	NGA3	Not Available	51.18%
Matrix_193	RAV1	Not Available	51.18%
Motif_99	DREB1A; DREB1C; DREB1B	Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression;Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit	51.12%
Matrix_143	GATA14; GATA6; GATA5	Not Available	50.84%
Matrix_333	GATA3	Not Available	50.82%
Matrix_45	DRN	Not Available	50.82%
Motif_226	E2F1OSPCNA	re2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissue	50.78%
Matrix_147	ERF3; AT1G80580	Not Available	50.66%
Matrix_504	WRKY40	Not Available	50.58%
Matrix_57	WIN1; SHN3; SHN2	Not Available	50.57%
Matrix_119	RRTF1	Not Available	50.55%
Matrix_259	AT1G50680; AT1G51120	Not Available	50.55%
Motif_73	AtWER	Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis	50.53%
Matrix_292	FTQ4	Not Available	50.51%
Motif_54	LTREATLTI78	Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana	50.45%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	50.42%
Motif_537	CONSERVED11NTZMATP1	Conserved 11 nt sequence found in the maize mitochondrial atp1 promoter; Located between -5 and +6; Essential for the expression	50.42%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	50.39%
Matrix_295	ERF1	Not Available	50.26%
Matrix_241	HB-1; AT5G44180	Not Available	50.15%
Matrix_86	CRF5; CRF6; CRF4	Not Available	50.15%