Binding site page : Motif_557


Identifier
Motif_557
Name
WRKY43;WRKY38;WRKY26
Description
Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
Number of genes
29
Associated publications
1, 2
Sequence
ACTTGACCAA
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Associated Transcription Factors

Transcription factor Alias Description Orthologs Associated motifs
AT5G07100WRKY DNA-binding protein 26Q9C5T3;WRKY26View orthologsView associated binding sites
AT2G46130WRKY DNA-binding protein 43WRKY43;Q8GY11View orthologsView associated binding sites
AT5G22570WRKY DNA-binding protein 38WRKY DNA-binding protein 38;Q8GWF1View orthologsView associated binding sites

Gene List

Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species strand chr type
GM17G07950 gma + Gm17 coding
GM01G42580 gma + Gm01 coding
GM13G16430 gma - Gm13 coding
GM02G47470 gma + Gm02 coding
GM13G06105 gma - Gm13 coding
GM19G03563 gma - Gm19 coding
PPE_005G17200 ppe + scaffold_5 coding
PPE_001G33880 ppe + scaffold_1 coding
PPE_008G12150 ppe + scaffold_8 coding
AT5G42500 ath - 5 coding
EG0002G01810 egr + scaffold_2 coding
EG0002G20280 egr - scaffold_2 coding
EG0006G09770 egr - scaffold_6 coding
VV06G08980 vvi - chr6 coding
VV00G02570 vvi - chrUn coding
VV19G08500 vvi + chr19 coding
VV13G04850 vvi - chr13 coding
VV09G02860 vvi + chr9 coding
ST12G007390 stu - chr12 coding
CM00018G02780 cme + CM3.5_scaffold00018 coding

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