PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_306
Name: TGA1
Description: TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_404	OBP4	Not Available	69.49%
Matrix_413	RAV1	Not Available	68.46%
Matrix_298	RAV1	Not Available	68.46%
Motif_583	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	66.25%
Matrix_352	LEC2	Not Available	65.18%
Matrix_431	ATHB21; HB-3	Not Available	65.01%
Matrix_33	SPL11; SPL10; SPL2	Not Available	64.56%
Matrix_494	OBP4	Not Available	64.39%
Matrix_453	EIL3	Not Available	63.13%
Matrix_376	WRKY45	Not Available	63.06%
Matrix_328	AT1G76580	Not Available	62.86%
Matrix_80	BIM1	Not Available	62.69%
Matrix_85	SPL5	Not Available	62.62%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	62.56%
Matrix_418	KNAT6; KNAT2	Not Available	62.54%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	62.45%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	62.37%
Matrix_109	GBF3	Not Available	62.23%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	62.00%
Matrix_469	NAC041; NAC083	Not Available	61.87%
Matrix_293	WRKY38	Not Available	61.80%
Matrix_331	GBF1	Not Available	61.71%
Matrix_329	WRKY12	Not Available	61.12%
Matrix_61	ATCBF3	Not Available	61.06%
Matrix_313	ATMYB65; MYB33	Not Available	61.05%
Matrix_450	SPL7	Not Available	60.93%
Matrix_221	SPL7	Not Available	60.85%
Matrix_180	SPL1	Not Available	60.78%
Matrix_227	AT1G64620	Not Available	60.70%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	60.62%
Matrix_156	POC1	Not Available	60.61%
Matrix_333	GATA3	Not Available	60.15%
Matrix_3	WRKY48	Not Available	60.09%
Matrix_38	SPL14	Not Available	60.06%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	59.97%
Matrix_483	ICU4	Not Available	59.85%
Matrix_463	HAT3.1	Not Available	59.52%
Matrix_188	SPL4	Not Available	59.34%
Matrix_75	WRKY29	Not Available	59.27%
Matrix_380	ATMYR1	Not Available	58.97%
Matrix_87	AT1G19000	Not Available	58.72%
Matrix_151	ASIL1	Not Available	58.68%
Matrix_301	PIL5	Not Available	58.68%
Matrix_343	AT2G33710	Not Available	58.57%
Matrix_520	ARR14	Not Available	58.55%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	58.36%
Matrix_302	HAT1; HAT2	Not Available	58.33%
Matrix_31	SPL1	Not Available	58.18%
Matrix_17	WRKY22	Not Available	58.14%
Matrix_234	RAP2.3	Not Available	58.13%
Matrix_71	ATHB7	Not Available	58.12%
Matrix_373	E2FE	Not Available	58.09%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	58.06%
Matrix_287	ERF2	Not Available	57.95%
Matrix_169	E2F1	Not Available	57.81%
Matrix_172	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	57.80%
Matrix_254	MYB52	Not Available	57.61%
Motif_446	C1MOTIFZMBZ2	C1-motif; Similar to Myb-box; Found in the promoter region of maize Bronze2 ( glutathione S-transferase) gene; C1 binding; C1-motif and R-motif were shown to be important for full R and C1 activation of the Bz2 promoter	57.57%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	57.54%
Matrix_186	FHY3	Not Available	57.53%
Matrix_416	ASL5	Not Available	57.49%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	57.48%
Matrix_370	WRKY50; WRKY51	Not Available	57.40%
Matrix_206	CUC1; ANAC100	Not Available	57.36%
Matrix_444	AT1G19485; AT4G17950	Not Available	57.36%
Matrix_12	EIN3; EIL2	Not Available	57.36%
Matrix_309	FLC	Not Available	57.26%
Matrix_226	GATA1	Not Available	57.26%
Matrix_286	GATA7	Not Available	57.25%
Matrix_259	AT1G50680; AT1G51120	Not Available	57.13%
Matrix_209	RAP2.6	Not Available	57.13%
Matrix_143	GATA14; GATA6; GATA5	Not Available	57.13%
Matrix_195	GATA2; GATA4	Not Available	57.09%
Matrix_53	MYC3	Not Available	57.08%
Matrix_101	ERF5	Not Available	57.02%
Matrix_70	GATA26	Not Available	56.93%
Matrix_489	RAV1	Not Available	56.87%
Matrix_41	anac058	Not Available	56.87%
Matrix_171	LBD3; LBD4	Not Available	56.62%
Matrix_384	ATWRKY17	Not Available	56.61%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	56.58%
Matrix_153	AP2	Not Available	56.53%
Matrix_307	RGL2; RGL3	Not Available	56.52%
Matrix_201	AT1G74840	Not Available	56.49%
Matrix_93	YAB5	Not Available	56.48%
Matrix_491	AT1G68670; AT3G25790	Not Available	56.42%
Matrix_408	GATA12	Not Available	56.36%
Matrix_475	AT5G64220	Not Available	56.34%
Matrix_59	AT4G00238; AT4G00250	Not Available	56.33%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	56.31%
Matrix_299	PFG3	Not Available	56.29%
Matrix_424	MYB59	Not Available	56.26%
Motif_430	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	56.24%
Matrix_321	HRD	Not Available	56.23%
Matrix_461	ATHB12	Not Available	56.09%
Matrix_52	ZAT18	Not Available	56.01%
Matrix_285	DDF1	Not Available	56.00%
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	56.00%
Matrix_308	INO	Not Available	56.00%
Matrix_72	CDF2	Not Available	55.97%
Matrix_162	AtPHR1	Not Available	55.93%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	55.89%
Matrix_315	MYB111	Not Available	55.89%
Matrix_192	FHY3/FAR1	Not Available	55.83%
Matrix_502	AT3G13040	Not Available	55.78%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	55.78%
Motif_256	RHE_element	Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns	55.75%
Matrix_137	SPL1; SPL12	Not Available	55.70%
Matrix_378	ATERF1	Not Available	55.58%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	55.52%
Matrix_102	WRKY21	Not Available	55.46%
Matrix_412	GL1	Not Available	55.43%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	55.31%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	55.29%
Matrix_246	ARR10	Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators	55.28%
Matrix_220	WRKY18	Not Available	55.16%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	55.16%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	55.12%
Matrix_337	MYB46	Not Available	55.11%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	55.07%
Matrix_480	BES1	Not Available	54.97%
Matrix_97	APRR2	Not Available	54.97%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	54.93%
Matrix_47	AtMYB77	Not Available	54.90%
Matrix_68	AtMYB77	More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84	54.90%
Motif_596	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	54.85%
Matrix_473	RRTF1	Not Available	54.84%
Motif_468	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	54.77%
Matrix_148	WRKY60	Not Available	54.71%
Matrix_374	AT5G07580; AT5G61590	Not Available	54.67%
Matrix_69	AT2G03500	Not Available	54.66%
Matrix_296	GBF2	Not Available	54.63%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	54.57%
Matrix_16	AT3G04450; PHL1	Not Available	54.55%
Motif_592	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	54.53%
Matrix_83	PRR5	Not Available	54.51%
Matrix_152	EIL1; AT5G65100	Not Available	54.50%
Matrix_300	bZIP68; bZIP16	Not Available	54.41%
Matrix_168	AHL25	Not Available	54.41%
Matrix_423	AT3G04030	Not Available	54.38%
Matrix_341	HMGA	Not Available	54.34%
Matrix_399	TGA1	Not Available	54.33%
Matrix_501	DAG2	Not Available	54.31%
Matrix_92	AT1G33760	Not Available	54.25%
Matrix_236	CCA1	Not Available	54.25%
Motif_436	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	54.20%
Matrix_4	ARR14	Not Available	54.16%
Matrix_210	ARR1	Not Available	54.12%
Matrix_8	KAN1	Not Available	54.01%
Motif_376	WRKY63	ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis	53.95%
Matrix_472	ZN_C2_H2	Not Available	53.91%
Matrix_438	AtbZIP63	Not Available	53.86%
Matrix_14	ZCW32; AT5G62610	Not Available	53.79%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	53.71%
Matrix_122	ABF1; AREB2	Not Available	53.64%
Matrix_240	AT4G29000	Not Available	53.61%
Matrix_19	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	53.50%
Matrix_505	GATA8	Not Available	53.49%
Matrix_311	TGA1	Not Available	53.44%
Matrix_212	ATHB-12	Not Available	53.37%
Matrix_249	WRKY11	Not Available	53.36%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	53.36%
Matrix_165	KNAT1	Not Available	53.33%
Matrix_203	GATA9; GATA12	Not Available	53.15%
Matrix_324	AT2G01060	Not Available	53.15%
Matrix_253	ETT	Not Available	53.14%
Matrix_495	HD-GL2-1; ANL2	Not Available	53.09%
Motif_227	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	53.07%
Matrix_197	NAP	Not Available	53.07%
Matrix_493	AT1G22985; AT1G71130	Not Available	53.03%
Matrix_361	AT1G25550	Not Available	53.01%
Matrix_434	ARR11	Not Available	53.00%
Matrix_37	GATA27	Not Available	52.99%
Motif_255	B2GMAUX28	B2; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -310 and -301; Contains a TGACGACA sequence which is similar to TGACGT/C sequence found in Ocs, CaMV35S and histone H3 promoter; Contains as-1 motif	52.98%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	52.98%
Matrix_255	cdf3	Not Available	52.98%
Matrix_389	ILR3	Not Available	52.89%
Matrix_114	EPR1; AT3G10113	Not Available	52.62%
Motif_497	ARE1	ARE (antioxidant response element); antioxidant response element of rat glutathione S-transferase Ya subunit, and rat NAD(P)H:quinone reductase genes	52.62%
Matrix_13	HAT5	Not Available	52.57%
Matrix_135	ABI3	Not Available	52.54%
Matrix_446	LBD16	Not Available	52.51%
Matrix_415	WRKY27	Not Available	52.48%
Matrix_146	ORA47	Not Available	52.48%
Matrix_142	ZFP8	Not Available	52.44%
Matrix_187	CDC5	Not Available	52.39%
Matrix_349	CDC5	Not Available	52.39%
Motif_386	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	52.39%
Motif_205	WRKY43; WRKY38; WRKY26; WRKY11	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	52.39%
Matrix_322	NST3; ANAC015; BRN2	Not Available	52.36%
Motif_440	TGA1 binding site motif	Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	52.34%
Motif_165	AP3SV40	AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2	52.32%
Matrix_340	HSFC1	Not Available	52.25%
Matrix_507	TCP3	Not Available	52.22%
Motif_347	OPAQUE2ZMB32	opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC)	52.22%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	52.18%
Matrix_88	AHL12	Not Available	52.10%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	52.09%
Matrix_174	ZAT2	Not Available	51.99%
Matrix_46	AT4G21895	Not Available	51.97%
Motif_690	AtWER	Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis	51.96%
Matrix_460	NAM; anac025; ATNAC2	Not Available	51.92%
Matrix_387	ORA47	Not Available	51.91%
Matrix_406	ATERF-7	Not Available	51.88%
Matrix_433	ATERF1	Not Available	51.86%
Motif_395	RHE_element	Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns	51.86%
Matrix_167	ZAT6	Not Available	51.85%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	51.84%
Motif_337	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	51.83%
Matrix_420	ANAC58	Not Available	51.83%
Matrix_181	Dof5.7	Not Available	51.83%
Motif_524	WRKY40; WRKY62; WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factors	51.81%
Matrix_141	AT3G25990	Not Available	51.80%
Matrix_25	AP3	Not Available	51.73%
Matrix_99	DOF4.7	Not Available	51.72%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	51.68%
Matrix_128	TGA2	Not Available	51.66%
Matrix_32	AHL25	Not Available	51.66%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	51.64%
Matrix_499	ARR18	Not Available	51.62%
Matrix_211	MYB3	Not Available	51.62%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	51.61%
Matrix_40	TCP2	Not Available	51.60%
Matrix_91	CRF3	Not Available	51.56%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	51.54%
Matrix_470	WRKY18	Not Available	51.54%
Matrix_382	AT3G04850	Not Available	51.52%
Motif_19	AAGACGTAGATACL12	Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT)	51.52%
Matrix_182	ATHB6	Not Available	51.47%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	51.43%
Motif_121	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	51.43%
Motif_557	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	51.43%
Matrix_394	DREB_U	Not Available	51.43%
Matrix_243	RAP2.12; RAP2.2	Not Available	51.41%
Matrix_451	STY1	Not Available	51.40%
Matrix_273	ANAC55	Not Available	51.37%
Matrix_244	DREB2C	Not Available	51.37%
Matrix_385	DEAR4	Not Available	51.37%
Matrix_132	SOC1	Not Available	51.32%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	51.32%
Matrix_213	ATHB22	Not Available	51.30%
Matrix_251	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	51.30%
Motif_325	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	51.30%
Matrix_176	MYB98	Not Available	51.29%
Matrix_229	CDC5	A cdc5+ homolog of a higher plant, Arabidopsis thaliana	51.21%
Matrix_355	ERF10; ERF11	Not Available	51.20%
Matrix_500	WRKY43	Not Available	51.20%
Matrix_465	MYC4	Not Available	51.20%
Matrix_50	ATERF14; AT5G43410	Not Available	51.19%
Matrix_447	RVE1	Not Available	51.19%
Matrix_330	MYC2; TT8	Not Available	51.18%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	51.12%
Motif_680	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	51.11%
Matrix_104	PI	Not Available	51.05%
Motif_135	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	51.02%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	50.98%
Matrix_252	RAP2.6	Not Available	50.97%
Motif_378	WRKY6	Targets of AtWRKY6 regulation during plant senescence and pathogen defense	50.95%
Matrix_228	TGA2	Not Available	50.87%
Matrix_427	ZAT14	Not Available	50.82%
Matrix_144	AT5G08330; AT5G23280	Not Available	50.80%
Matrix_290	AP2	Not Available	50.79%
Matrix_120	BEE2	Not Available	50.78%
Matrix_190	ATERF1	Not Available	50.75%
Motif_541	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	50.70%
Matrix_323	BIM3	Not Available	50.69%
Motif_675	FUS3; ABI3	Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product	50.67%
Motif_167	SBP-box promoter motif	Molecular characterisation of the Arabidopsis SBP-box genes	50.65%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	50.57%
Motif_374	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	50.56%
Matrix_409	DEAR3	Not Available	50.53%
Matrix_54	AHL20	Not Available	50.50%
Matrix_261	ATERF-1	Not Available	50.43%
Matrix_271	AT3G16350	Not Available	50.42%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	50.39%
Matrix_282	bZIP60	Not Available	50.37%
Matrix_79	FUS3	Not Available	50.35%
Matrix_432	AT1G77920	Not Available	50.27%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	50.23%
Matrix_504	WRKY40	Not Available	50.21%
Motif_338	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	50.17%
Motif_295	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	50.17%
Motif_128	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	50.13%
Matrix_113	ABI5	Not Available	50.06%
Matrix_462	ATERF-8	Not Available	50.03%
Matrix_455	MYB111	Not Available	50.00%