Matrix_521 | AHL20 | Not Available | | 89.47% |
Matrix_168 | AHL25 | Not Available | | 84.81% |
Matrix_32 | AHL25 | Not Available | | 84.68% |
Matrix_391 | AHL20 | Not Available | | 83.24% |
Matrix_125 | AHL12 | Not Available | | 81.75% |
Matrix_88 | AHL12 | Not Available | | 81.60% |
Matrix_54 | AHL20 | Not Available | | 77.10% |
Matrix_212 | ATHB-12 | Not Available | | 74.03% |
Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 73.63% |
Matrix_354 | AHL12 | Not Available | | 72.75% |
Matrix_434 | ARR11 | Not Available | | 71.20% |
Matrix_286 | GATA7 | Not Available | | 69.70% |
Matrix_447 | RVE1 | Not Available | | 68.29% |
Motif_235 | C8GCARGAT | Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15) | | 67.33% |
Matrix_308 | INO | Not Available | | 66.82% |
Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 66.26% |
Matrix_12 | EIN3; EIL2 | Not Available | | 65.74% |
Matrix_442 | AT5G62260 | Not Available | | 65.65% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 65.47% |
Matrix_157 | LHY; RVE2 | Not Available | | 65.46% |
Matrix_93 | YAB5 | Not Available | | 65.13% |
Matrix_382 | AT3G04850 | Not Available | | 65.07% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 64.59% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 64.36% |
Matrix_226 | GATA1 | Not Available | | 64.11% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 63.71% |
Matrix_46 | AT4G21895 | Not Available | | 63.26% |
Matrix_341 | HMGA | Not Available | | 63.19% |
Matrix_502 | AT3G13040 | Not Available | | 63.14% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 63.02% |
Matrix_182 | ATHB6 | Not Available | | 62.97% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 62.92% |
Matrix_271 | AT3G16350 | Not Available | | 62.75% |
Matrix_181 | Dof5.7 | Not Available | | 62.72% |
Matrix_227 | AT1G64620 | Not Available | | 62.22% |
Matrix_276 | AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660 | Not Available | | 62.18% |
Matrix_103 | ATHB1 | The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 62.18% |
Matrix_67 | GLK1 | Not Available | | 62.07% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 61.95% |
Matrix_366 | ARR14 | Not Available | | 61.91% |
Matrix_204 | WOX13 | Not Available | | 61.89% |
Matrix_195 | GATA2; GATA4 | Not Available | | 61.30% |
Matrix_72 | CDF2 | Not Available | | 61.29% |
Matrix_99 | DOF4.7 | Not Available | | 61.16% |
Matrix_441 | ATHB5 | Not Available | | 61.11% |
Matrix_392 | ARR2 | Not Available | | 61.09% |
Matrix_471 | KAN4 | Not Available | | 60.92% |
Matrix_383 | CCA1 | Not Available | | 60.52% |
Matrix_17 | WRKY22 | Not Available | | 60.39% |
Matrix_160 | RVE1 | Not Available | | 60.38% |
Matrix_97 | APRR2 | Not Available | | 60.37% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 60.28% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 60.24% |
Matrix_483 | ICU4 | Not Available | | 60.08% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 60.05% |
Motif_615 | MARTBOX | T-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR) | | 59.81% |
Matrix_501 | DAG2 | Not Available | | 59.80% |
Matrix_408 | GATA12 | Not Available | | 59.74% |
Matrix_435 | ATHB51 | Not Available | | 59.70% |
Matrix_142 | ZFP8 | Not Available | | 59.54% |
Matrix_427 | ZAT14 | Not Available | | 59.51% |
Matrix_230 | ARR11 | Not Available | | 59.51% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 59.40% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 59.39% |
Matrix_70 | GATA26 | Not Available | | 59.32% |
Matrix_37 | GATA27 | Not Available | | 59.01% |
Matrix_327 | ARR11 | Not Available | | 58.98% |
Matrix_62 | HAT5 | Not Available | | 58.90% |
Matrix_141 | AT3G25990 | Not Available | | 58.85% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 58.64% |
Matrix_240 | AT4G29000 | Not Available | | 58.63% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 58.61% |
Matrix_151 | ASIL1 | Not Available | | 58.48% |
Matrix_416 | ASL5 | Not Available | | 58.17% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 58.08% |
Motif_83 | CIACADIANLELHC | Region necessary for circadian expression of tomato Lhc gene | | 58.01% |
Motif_624 | ATHB6 binding site motif | Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis | | 57.92% |
Matrix_81 | YAB1 | Not Available | | 57.87% |
Matrix_430 | TOE2 | Not Available | | 57.76% |
Matrix_100 | AT1G48610 | Not Available | | 57.57% |
Matrix_249 | WRKY11 | Not Available | | 57.48% |
Matrix_318 | ATHB16 | Not Available | | 57.41% |
Matrix_8 | KAN1 | Not Available | | 57.39% |
Matrix_4 | ARR14 | Not Available | | 57.34% |
Motif_198 | CARGATCONSENSUS | CArG consensus sequence found in the promoter of Arabidopsis SOC1 which is the MADS-box flowering-time gene; FLC is a component of the vernalization (low-temperature) pathway binds directly to this site and blocks transcriptional activation of SOC1 by CONSTANS (CO) | | 57.32% |
Matrix_336 | AT5G08520 | Not Available | | 57.28% |
Motif_285 | HDZIP2ATATHB2 | Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene | | 57.28% |
Matrix_500 | WRKY43 | Not Available | | 57.19% |
Matrix_489 | RAV1 | Not Available | | 57.19% |
Matrix_350 | ARR14 | Not Available | | 57.16% |
Matrix_410 | TOE2 | Not Available | | 57.12% |
Matrix_461 | ATHB12 | Not Available | | 57.11% |
Matrix_75 | WRKY29 | Not Available | | 57.09% |
Motif_277 | ATHB1 binding site motif | Recognition sequence of Arabidopsis Athb-1 protein; Athb-1 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); HD-Zip domain binds to DNA as a dimer; The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 57.07% |
Matrix_463 | HAT3.1 | Not Available | | 57.05% |
Matrix_210 | ARR1 | Not Available | | 57.03% |
Matrix_52 | ZAT18 | Not Available | | 57.03% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 56.99% |
Matrix_106 | AT5G47390 | Not Available | | 56.77% |
Matrix_112 | TBP2; TFIID-1 | Not Available | | 56.60% |
Matrix_453 | EIL3 | Not Available | | 56.57% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 56.56% |
Matrix_333 | GATA3 | Not Available | | 56.44% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 56.34% |
Matrix_380 | ATMYR1 | Not Available | | 56.27% |
Matrix_361 | AT1G25550 | Not Available | | 56.15% |
Matrix_402 | TOE1 | Not Available | | 55.89% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 55.81% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 55.71% |
Matrix_424 | MYB59 | Not Available | | 55.69% |
Matrix_236 | CCA1 | Not Available | | 55.65% |
Matrix_69 | AT2G03500 | Not Available | | 55.59% |
Matrix_254 | MYB52 | Not Available | | 55.53% |
Matrix_311 | TGA1 | Not Available | | 55.52% |
Matrix_324 | AT2G01060 | Not Available | | 55.46% |
Matrix_384 | ATWRKY17 | Not Available | | 55.27% |
Matrix_328 | AT1G76580 | Not Available | | 55.23% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 55.07% |
Motif_352 | ATHB5 binding site motif | Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 55.04% |
Matrix_162 | AtPHR1 | Not Available | | 55.04% |
Matrix_255 | cdf3 | Not Available | | 54.94% |
Matrix_404 | OBP4 | Not Available | | 54.75% |
Matrix_78 | AT3G45610 | Not Available | | 54.72% |
Matrix_71 | ATHB7 | Not Available | | 54.57% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 54.53% |
Matrix_423 | AT3G04030 | Not Available | | 54.45% |
Matrix_248 | ZFP5 | Not Available | | 54.40% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 54.13% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 53.99% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 53.98% |
Matrix_265 | NGA3 | Not Available | | 53.89% |
Matrix_193 | RAV1 | Not Available | | 53.89% |
Matrix_177 | ADOF2 | Not Available | | 53.76% |
Matrix_53 | MYC3 | Not Available | | 53.74% |
Motif_408 | EVENINGAT | Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock | | 53.71% |
Matrix_41 | anac058 | Not Available | | 53.62% |
Matrix_109 | GBF3 | Not Available | | 53.41% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 53.35% |
Matrix_494 | OBP4 | Not Available | | 53.34% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 53.30% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 53.25% |
Matrix_479 | TOE1 | Not Available | | 53.24% |
Matrix_188 | SPL4 | Not Available | | 53.23% |
Matrix_6 | AT1G70000 | Not Available | | 53.10% |
Matrix_3 | WRKY48 | Not Available | | 52.92% |
Motif_660 | GT-3b | Pathogen- and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor | | 52.90% |
Matrix_415 | WRKY27 | Not Available | | 52.66% |
Matrix_80 | BIM1 | Not Available | | 52.63% |
Matrix_302 | HAT1; HAT2 | Not Available | | 52.59% |
Motif_642 | SEF1MOTIF | SEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) gene | | 52.59% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 52.55% |
Matrix_505 | GATA8 | Not Available | | 52.53% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 52.43% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 52.29% |
Matrix_171 | LBD3; LBD4 | Not Available | | 52.28% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 52.10% |
Matrix_84 | AtGRF6 | Not Available | | 52.00% |
Matrix_429 | KAN4 | Not Available | | 51.86% |
Matrix_262 | ATGRP2B; CSDP2 | Not Available | | 51.85% |
Matrix_487 | AT1G29160 | Not Available | | 51.84% |
Matrix_411 | DOF5.6 | Not Available | | 51.80% |
Motif_169 | ATHB2 binding site motif | Recognition sequence of Arabidopsis Athb-2 protein; Athb-2 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 51.76% |
Matrix_128 | TGA2 | Not Available | | 51.71% |
Matrix_101 | ERF5 | Not Available | | 51.68% |
Motif_34 | LECPLEACS2 | Core element in LeCp (tomato Cys protease) binding cis-element (from -715 to -675) in LeAcs2 gene | | 51.61% |
Motif_631 | MARARS | ARS element; Motif found in SAR (MAR) | | 51.45% |
Matrix_38 | SPL14 | Not Available | | 51.39% |
Motif_231 | EIN3 | Ethylene signaling in Arabidopsis involves feedback regulation via the elaborate control of EBF2 expression by EIN3 | | 51.35% |
Matrix_274 | EDF3 | Not Available | | 51.18% |
Motif_673 | Bellringer/replumless/pennywise BS2 IN AG | Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems | | 51.15% |
Matrix_51 | LFY | Not Available | | 51.15% |
Matrix_166 | TGA4 | Not Available | | 51.10% |
Matrix_397 | GT2L | Not Available | | 51.06% |
Matrix_197 | NAP | Not Available | | 50.99% |
Matrix_136 | SEP3 | Not Available | | 50.95% |
Motif_540 | CCA1 motif1 BS in CAB1 | A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | | 50.76% |
Motif_424 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 50.63% |
Matrix_337 | MYB46 | Not Available | | 50.52% |
Matrix_519 | ATDOF2.4 | Not Available | | 50.34% |
Matrix_205 | AGL15 | Not Available | | 50.33% |
Matrix_512 | HAT3 | Not Available | | 50.26% |
Matrix_87 | AT1G19000 | Not Available | | 50.21% |
Matrix_523 | FUSCA3 | Not Available | | 50.20% |
Matrix_126 | RBE | Not Available | | 50.15% |
Matrix_307 | RGL2; RGL3 | Not Available | | 50.15% |
Motif_345 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 50.04% |