Binding site page : Motif_352


Identifier
Motif_352
Name
ATHB5 binding site motif
Description
Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro
Number of genes
663
Sequence
CAATNATTG
Positional Weight Matrix

Binding site distribution per species

Upstream data    Downstream data    Intron data    All data

Binding site distribition per location

Toolbox

Explore

View

 

Associated Transcription Factors

Transcription factor Alias Description Orthologs Associated motifs
AT5G65310homeobox protein 5homeobox protein 5;P46667View orthologsView associated binding sites

Gene List

Index of genes with 1 constraints:

Page 1 of 34, showing 20 records out of 663 total, starting on record 1, ending on 20

gene_id species strand chr type
GM00G00770 gma + scaffold_41 coding
GM01G40380 gma + Gm01 coding
GM01G45320 gma + Gm01 coding
GM02G06970 gma + Gm02 coding
GM02G07070 gma - Gm02 coding
GM02G41810 gma + Gm02 coding
GM03G10390 gma + Gm03 coding
GM03G16130 gma + Gm03 coding
GM03G19810 gma + Gm03 coding
GM03G35850 gma - Gm03 coding
GM03G38591 gma + Gm03 coding
GM04G37250 gma - Gm04 coding
GM05G03410 gma - Gm05 coding
GM05G32750 gma + Gm05 coding
GM05G35151 gma - Gm05 coding
GM06G05170 gma + Gm06 coding
GM06G43040 gma - Gm06 coding
GM07G02590 gma - Gm07 coding
GM07G03590 gma - Gm07 coding
GM07G04530 gma - Gm07 coding

Download genes (select columns to include)

gene_id
species
strand
chr
type