At2g28780.1 68409.m03167 expressed protein
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec16988 | igr5553#chr1#x1=25868910#l=5170_3668-3742 | TGAAGTGTTTGGGGGAACTC | 5 | |
| 2 | prec17162 | igr5553#chr1#x1=25868910#l=5170_871-950 | TGAAGTGTTTGGGGGAACTC | 5 | |
| 3 | prec4296 | igr2220#chr1#x1=9361654#l=6560_1540-1612 | TGAAGTGTTTGGGGGAACTC | 5 |
Gene Sequence:
aaauuauucc auauucuucu uauuuccauu auuucaccuc aaaucauuag auucuuacac 60 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 aacacaacaa caaacuagcu cccaagucua agcuuuuauu ucacuucaaa guugucuuug 120 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 gcugucucuc ucuauauaua AUGCUAAUGA CGGAGAGAGG CCGAGCCAUG UGGCGCACGU 180 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GCCUAGCCUC AGCGUUCCGA ACAGCUCUAG CCUGCACAAU CGUUGGUUCA GCUACACUAU 240 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 ACGGUCCAGA AUGGAUCAAC CGCCACGUGG CAUUCCCGGC CUUCUCUUAC GUCACGGUUA 300 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UCCUCAUCAU CACGGAUGCU ACACUCGGAG ACACGCUACG UGGCUGCUGG UUAGCUCUUU 360 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 ACGCCACGUG UCAGAGCGUG GGACCUGCGA UCGUCACGUU AAAGCUUAUA AGACCAGCUC 420 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GUCUGACAGC CGAAACCACG GCUCUGGCGG CGGCUCUAGC GGCGUUUGUG GUAGUGCUGC 480 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 CUAACAGUUC GACUCACUUG GUGGCUAAGA GAAUCGCGUU AGGACAAAUC GUUCUUAUAU 540 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AUGUUAUUGG UUAUAUCAAA GGAGCUAAGA CUGAUCCAGU UAUGCACCCU CUUCAAGUCG 600 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 CGGCUAGCAC CGCGCUUGGU GUUGUAGCUU GCGUUCUUGC ACUACUCGUC CCACUACCUC 660 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GCUUGGCUAC UUGCGAGGUG AAACAAAGCU GCAAAGAGCU UGGUCAAAAU GUAACAACGA 720 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GAGUGAAGUU GUAUAUGAAG GCUUUUUGCU CCGAUGAUAG CAUGUCAGCA ACGGCUUCAG 780 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UCUCACAGGC UCGAGUGUUG GCUCGUUCUU CCUCCAAGCU UUAUCAAACA CUCAAACGUU 840 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 ACCAACCAAG CAUGACAUGG GAGAGGCUUC CAUUUAAGAU AUGGAGGUGG CAAAACGUGA 900 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AUGAUAACAA AGGAGAGAAA CUACAAAGCA UGGAAAUUGC UCUUAGAGGA AUGGAAAUGG 960 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UAGUAGCAAG CAAAUCUCCU AUUCCUUCGA GCUUACUUGC GGGUGAAGUA AAAGAAGAUC 1020 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UCAAGAAUAU ACAAGAACGU GUGAUUCUCU CAAUUAAAAG AGUGAAUAAU AGUUCGCAAC 1080 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 CGUCAGUAAC ACCAGAAUCU GAUCCGAAAA ACCCCGAUGA GUGCCUCCAA ACACUUCAGG 1140 .......... .......... .......... ........** ********** ********.. prec16988 .......... .......... .......... ........** ********** ********.. prec17162 .......... .......... .......... ........** ********** ********.. prec4296 AAAUCCCGGG AACGCCUCAA GAUUUGCCCU UUUACUUCUU CUUGUUCUGC AUCAGGCUCC 1200 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UUGAAACCAU CAUAAUAGCU AAACCGGAGG AGAACAAAGU CAAGGUCUUA GAAAACAAAU 1260 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UCAAGACGAG GUCUUGGAUA AGUGAUUGGG ACAGCAAGAA AAUUAUGCCG GCGCUAAAGC 1320 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UAUCACUCUC AUUAGGCUUA GCGAUUUUGC UAGGUUCGAU GUUUAGUAAG CCAAACGGUU 1380 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AUUGGGCUGG UUUACCCGUA GCAGUCAGCU UCGCAGCGGC CAGAGAGGCG ACGUUUAAAG 1440 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UGACGAAUGU GAAGGCACAA GGGACAGUGA UAGGGACAGU GUAUGGAGUG AUGGGCUGUU 1500 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UUGUGUUUCA GAAGUUUUUG ACGGUUCGGU UUCUUUCUUU GCUUCCAUGG UUUCUCUUCU 1560 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 CUAGCUUCUU AAGCAGGAGC AAGAUGUACG GGCAAGCCGG AGGGAUAUCA GCGGCCAUAG 1620 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GGGCCGUUUU GAUUCUCGGA AGAAAGAAUU UCGGGCCACC AAGCGAGUUC GCGAUCGAGA 1680 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GAAUUAUCGA GACUUUUAUU GGGUUGUCUU GUUCGAUCAU GGUGGAGCUU GUCUUUCAGC 1740 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 CUACAAGAGC CGCUAACAUA GCAAAACUUG AGCUCUCUAG AAGCUUCCAC GCUUUGUACG 1800 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AGUGUGCAAG CUUGUUUGGA GCUAAAGCGA GUAAAGCAGA UAUAAUGGAA AGUCAAAAGA 1860 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AGUUGAGAAG UCAUUUAAAU GAGCUCAAGA AGUUCACAGC AGAAGCCCAU GCAGAGCCAA 1920 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GUUUCUGGUU UUCGCCUUUC AACUUUUCUU GCUACGAAAA GCUGUUCAAG UCAUUGUCUA 1980 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AAAUGGCUGA UCUAUUGCAA UUCAGCGGUU ACGCCAUAGG CUUUCUUGGA GAACAAGGAA 2040 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AAACAAAAUC ACCGCAGUGU AAGGAGAUUC UAAGCAACGU AGACAAAGAU CUCAAGAGUC 2100 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UAACAGAAAG CAUAGGUCUU UUAGCCAAAU CAUUCGAGGA AAUCACACUU CUAAAAUCAC 2160 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UAGACGCACU CGAAAAGGCG CUCGCCAAGA GCGACAACAC CUCAUGGGAC AUUGAGCUCG 2220 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GGAAGACACC GAACCCUAGC UUCUCAACCG CCGUGAGCGA GCCGGAGAAG AUUUUAGAAA 2280 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 CGUAUCUCCA GCAUUGCAGA AGCGUGGCGG AUGGACUAUU CCGUGUGGAA GAAGAUGGAG 2340 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AAGAAGAGGU UGAAGUGGAC AAGAGUGAGG UUGUGUUGAG UUUGUGUGCA UUAGGGUUUU 2400 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 GUGUGGAGAG AAUUGGGAAA GAGACAAGAG AGAUUGAGGA GAUGGUUAAA GAGGUUGUGC 2460 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 AAUCGGAAAA UCCUUCAAGC CAUGUUAACU UGCAUGAGAU CUCUUGCAAA AUACGUUCUU 2520 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 UGUAUAAAUG Auaauauuuu accauugaua aacaacaaau ggcgugugaa agacgaaaac 2580 .......... .......... .......... .......... .......... .......... prec16988 .......... .......... .......... .......... .......... .......... prec17162 .......... .......... .......... .......... .......... .......... prec4296 guuuguuuuu uugguu 2596 .......... ...... prec16988 .......... ...... prec17162 .......... ...... prec4296