At1g30490.1 68408.m03374 HD-Zip transcription factor Athb-9
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec10096 | igr3289#chr5#x1=16380038#l=5991_3654-3794 | TCGGACCAGGCTTCATTCCCCTCA | 4 | ath-MIR166e |
| 2 | prec10608 | igr3459#chr5#x1=17123821#l=3126_727+1085 | TCGGACCAGGCTTCATTCCCCTCA | 4 |
Gene Sequence:
cugccucgcu uuugcuccuu uuaccucuuu ccaucuuuca aucuccuuug agagagagag 60 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 caaaugaaaa aaacccaaaa aacucuuuuc uccaaccauu accaucucau gaacacucuc 120 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 acaggaggcu cucucuucuc agagagccua cccaucuaau auuucuucau cugagucucu 180 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 uuuacuucuc ucaaaguauc gaucuuuauu cuucuuuuug uaaacccucu cucucucucu 240 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 gauuucuacu gaccuguuug gaagauAUGA UGGCUCAUCA CUCCAUGGAC GAUAGAGACU 300 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUCCUGAUAA AGGAUUUGAU UCCGGCAAGU ACGUUAGAUA CACGCCGGAA CAAGUUGAAG 360 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUCUUGAGAG AGUUUAUGCU GAGUGUCCUA AACCUAGCUC UCUGAGAAGA CAACAGCUUA 420 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UUCGUGAAUG UCCCAUUCUC UGUAACAUCG AGCCUCGACA GAUCAAAGUU UGGUUCCAGA 480 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AUCGCAGAUG UCGAGAGAAG CAGAGGAAAG AGUCAGCUCG UCUUCAGACA GUGAACAGGA 540 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AGCUGAGUGC UAUGAACAAG CUUUUGAUGG AAGAGAAUGA UCGUUUGCAG AAGCAAGUCU 600 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CCAACUUGGU UUAUGAGAAU GGAUUCAUGA AACAUCGAAU CCACACUGCU UCUGGGACGA 660 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CCACAGACAA CAGCUGUGAG UCUGUGGUCG UGAGUGGUCA GCAACGUCAG CAGCAAAACC 720 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CAACACAUCA GCAUCCUCAG CGUGAUGUUA ACAACCCAGC UAAUCUUCUC UCGAUUGCGG 780 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AGGAGACCUU GGCGGAGUUC CUUUGCAAGG CUACAGGAAC UGCUGUCGAC UGGGUCCAGA 840 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UGAUUGGGAU GAAGCCUGGU CCGGAUUCUA UUGGUAUCGU AGCUGUUUCA CGCAACUGCA 900 ********** ********** ****...... .......... .......... .......... prec10096 ********** ********** ****...... .......... .......... .......... prec10608 GUGGAAUAGC AGCACGUGCC UGUGGCCUCG UGAGUUUAGA ACCCAUGAAG GUCGCUGAAA 960 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UCCUCAAAGA UCGUCCAUCU UGGUUCCGUG ACUGUCGAUG UGUCGAGACU CUGAAUGUUA 1020 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UACCCACUGG AAAUGGUGGU ACUAUCGAGC UUGUCAACAC UCAGAUUUAU GCUCCUACAA 1080 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CAUUAGCAGC AGCUCGUGAC UUUUGGACGC UGAGAUAUAG UACAAGUCUA GAAGAUGGAA 1140 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GCUAUGUGGU CUGUGAGAGA UCACUCACUU CUGCAACUGG UGGCCCCAAU GGUCCACUUU 1200 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUUCAAGCUU CGUGAGAGCC AAAAUGCUGU CAAGCGGGUU UCUUAUCCGU CCUUGUGAUG 1260 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GUGGUGGUUC CAUUAUUCAC AUCGUUGAUC AUGUGGACUU GGAUGUCUCA AGUGUUCCUG 1320 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AAGUCCUCAG GCCUCUUUAU GAGUCUUCCA AAAUCCUUGC UCAAAAAAUG ACUGUCGCUG 1380 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUCUGAGACA UGUGCGCCAA AUUGCUCAAG AGACUAGUGG AGAAGUCCAG UAUAGUGGUG 1440 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GACGCCAGCC UGCAGUUUUA AGGACUUUCA GCCAGAGACU CUGCCGGGGU UUCAAUGAUG 1500 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUGUAAAUGG UUUUGUCGAU GAUGGAUGGU CUCCAAUGAG UAGUGAUGGA GGAGAGGAUA 1560 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UUACGAUCAU GAUUAACUCU UCCUCUGCUA AAUUUGCUGG CUCCCAAUAC GGUAGCUCAU 1620 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UUCUUCCAAG UUUUGGAAGU GGUGUCCUCU GUGCCAAAGC UUCUAUGCUG UUGCAGAAUG 1680 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UUCCACCCCU UGUAUUGAUU CGGUUCCUGA GAGAACACCG AGCUGAAUGG GCAGACUAUG 1740 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GUGUCGAUGC CUAUUCUGCU GCAUCUCUCA GAGCAACUCC AUAUGCUGUU CCAUGCGUCA 1800 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GAACCGGUGG GUUCCCGAGU AACCAAGUCA UUCUUCCUCU CGCACAGACA CUCGAACAUG 1860 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AAGAGUUUCU CGAAGUGGUU AGACUUGGAG GUCAUGCUUA CUCACCUGAA GACAUGGGCU 1920 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UAUCCCGGGA UAUGUAUUUA CUGCAGCUUU GUAGCGGCGU UGAUGAAAAU GUGGUUGGAG 1980 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GUUGUGCUCA GCUUGUCUUU GCCCCAAUCG AUGAAUCAUU UGCUGAUGAU GCACCUUUGC 2040 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UUCCUUCUGG UUUCCGUGUC AUACCACUCG ACCAAAAAAC AAAUCCGAAU GAUCAUCAAU 2100 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUGCAAGUCG AACACGGGAU CUAGCAUCGU CCCUAGAUGG UUCCACCAAA ACCGAUUCGG 2160 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AAACAAACUC UAGAUUGGUC UUAACAAUAG CCUUCCAGUU CACGUUUGAU AACCAUUCCA 2220 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GAGACAAUGU UGCUACAAUG GCGAGACAGU AUGUGAGGAA CGUUGUUGGU UCGAUUCAGA 2280 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GAGUGGCUCU AGCCAUUACG CCUCGUCCUG GCUCAAUGCA ACUUCCCACU UCCCCUGAAG 2340 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUCUCACUCU UGUCCGUUGG AUCACCCGUA GUUACAGUAU UCAUACAGGU GCAGAUCUGU 2400 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 UUGGAGCUGA UUCUCAGUCC UGUGGAGGAG ACACAUUGCU UAAGCAACUC UGGGACCAUA 2460 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 GUGAUGCCAU AUUGUGCUGC UCCCUGAAAA CUAAUGCCUC ACCGGUAUUC ACAUUUGCAA 2520 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 ACCAAGCUGG UUUAGACAUG CUUGAAACUA CACUUGUGGC ACUUCAGGAU AUAAUGCUCG 2580 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 ACAAAACACU UGAUGACUCU GGUCGUAGAG CUCUUUGCUC CGAGUUCGCC AAGAUCAUGC 2640 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 AGCAGGGAUA UGCGAAUCUU CCGGCAGGAA UAUGUGUGUC GAGCAUGGGC AGACCGGUUU 2700 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CGUAUGAGCA AGCGACGGUG UGGAAAGUUG UUGAUGACAA CGAAUCAAAC CACUGCUUGG 2760 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 CUUUUACCCU CGUUAGUUGG UCGUUUGUUU GAugaaggaa aagguugguu auguuagaua 2820 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 uuaaaaguua ggggauguug uuuuuggcua agguuuguug aauuagagag uccauaacuc 2880 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 uauauguaau auggaaaaau ucugaugaua aucucuuuaa ucaauuauga cauuauguau 2940 .......... .......... .......... .......... .......... .......... prec10096 .......... .......... .......... .......... .......... .......... prec10608 ggcaagauau uuauuuuuau uuauguuuug gacuuguuuc guuuu 2985 .......... .......... .......... .......... ..... prec10096 .......... .......... .......... .......... ..... prec10608