Gene Ontology terms associated with a binding site

Binding site
Motif_468
Name
WRKY43;WRKY38;WRKY26
Description
Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
#Associated genes
30
#Associated GO terms
640
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell13 (43.33%)4112002003
GO:0044464cell part13 (43.33%)4112002003
GO:0005622intracellular12 (40.00%)4112001003
GO:0044424intracellular part12 (40.00%)4112001003
GO:0005737cytoplasm11 (36.67%)3112001003
GO:0043231intracellular membrane-bounded organelle11 (36.67%)4112001002
GO:0043229intracellular organelle11 (36.67%)4112001002
GO:0043227membrane-bounded organelle11 (36.67%)4112001002
GO:0043226organelle11 (36.67%)4112001002
GO:0044444cytoplasmic part9 (30.00%)3112000002
GO:0016020membrane9 (30.00%)3112001001
GO:0044446intracellular organelle part8 (26.67%)3102000002
GO:0044422organelle part8 (26.67%)3102000002
GO:0071944cell periphery5 (16.67%)0012001001
GO:0005634nucleus5 (16.67%)1001001002
GO:0031090organelle membrane5 (16.67%)3101000000
GO:0005886plasma membrane5 (16.67%)0012001001
GO:0016021integral to membrane4 (13.33%)3100000000
GO:0070013intracellular organelle lumen4 (13.33%)0002000002
GO:0031224intrinsic to membrane4 (13.33%)3100000000
GO:0044425membrane part4 (13.33%)3100000000
GO:0031974membrane-enclosed lumen4 (13.33%)0002000002
GO:0005739mitochondrion4 (13.33%)2101000000
GO:0043233organelle lumen4 (13.33%)0002000002
GO:0009507chloroplast3 (10.00%)1101000000
GO:0031301integral to organelle membrane3 (10.00%)2100000000
GO:0005779integral to peroxisomal membrane3 (10.00%)2100000000
GO:0043232intracellular non-membrane-bounded organelle3 (10.00%)0001000002
GO:0031300intrinsic to organelle membrane3 (10.00%)2100000000
GO:0031231intrinsic to peroxisomal membrane3 (10.00%)2100000000
GO:0032991macromolecular complex3 (10.00%)0000000003
GO:0042579microbody3 (10.00%)2100000000
GO:0031903microbody membrane3 (10.00%)2100000000
GO:0044438microbody part3 (10.00%)2100000000
GO:0043228non-membrane-bounded organelle3 (10.00%)0001000002
GO:0031981nuclear lumen3 (10.00%)0001000002
GO:0044428nuclear part3 (10.00%)0001000002
GO:0005730nucleolus3 (10.00%)0001000002
GO:0005778peroxisomal membrane3 (10.00%)2100000000
GO:0044439peroxisomal part3 (10.00%)2100000000
GO:0005777peroxisome3 (10.00%)2100000000
GO:0009536plastid3 (10.00%)1101000000
GO:0043234protein complex3 (10.00%)0000000003
GO:0005783endoplasmic reticulum2 (6.67%)0011000000
GO:0005794Golgi apparatus1 (3.33%)1000000000
GO:0044431Golgi apparatus part1 (3.33%)1000000000
GO:0000139Golgi membrane1 (3.33%)1000000000
GO:0031209SCAR complex1 (3.33%)0000000001
GO:0030054cell junction1 (3.33%)0001000000
GO:0005911cell-cell junction1 (3.33%)0001000000
GO:0000785chromatin1 (3.33%)0000000001
GO:0044427chromosomal part1 (3.33%)0000000001
GO:0005694chromosome1 (3.33%)0000000001
GO:0044430cytoskeletal part1 (3.33%)0000000001
GO:0005856cytoskeleton1 (3.33%)0000000001
GO:0005829cytosol1 (3.33%)0001000000
GO:0012505endomembrane system1 (3.33%)1000000000
GO:0005788endoplasmic reticulum lumen1 (3.33%)0001000000
GO:0044432endoplasmic reticulum part1 (3.33%)0001000000
GO:0015630microtubule cytoskeleton1 (3.33%)0000000001
GO:0000790nuclear chromatin1 (3.33%)0000000001
GO:0000228nuclear chromosome1 (3.33%)0000000001
GO:0044454nuclear chromosome part1 (3.33%)0000000001
GO:0030874nucleolar chromatin1 (3.33%)0000000001
GO:0044452nucleolar part1 (3.33%)0000000001
GO:0005731nucleolus organizer region1 (3.33%)0000000001
GO:0009524phragmoplast1 (3.33%)0000000001
GO:0009506plasmodesma1 (3.33%)0001000000
GO:0030427site of polarized growth1 (3.33%)0000000001
GO:0005819spindle1 (3.33%)0000000001
GO:0055044symplast1 (3.33%)0001000000
GO:0005774vacuolar membrane1 (3.33%)0001000000
GO:0044437vacuolar part1 (3.33%)0001000000
GO:0005773vacuole1 (3.33%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process15 (50.00%)3112012005
GO:0044699single-organism process14 (46.67%)3110212004
GO:0050896response to stimulus12 (40.00%)2112202002
GO:0008152metabolic process11 (36.67%)2012021003
GO:0044763single-organism cellular process11 (36.67%)2110012004
GO:0065007biological regulation10 (33.33%)3101001004
GO:0044237cellular metabolic process10 (33.33%)2012011003
GO:0071704organic substance metabolic process10 (33.33%)2012011003
GO:0048856anatomical structure development9 (30.00%)1000202004
GO:0032502developmental process9 (30.00%)1000202004
GO:0032501multicellular organismal process9 (30.00%)1000202004
GO:0044767single-organism developmental process9 (30.00%)1000202004
GO:0016043cellular component organization8 (26.67%)2110001003
GO:0071840cellular component organization or biogenesis8 (26.67%)2110001003
GO:0007275multicellular organismal development8 (26.67%)1000202003
GO:0044238primary metabolic process8 (26.67%)1002011003
GO:0050789regulation of biological process8 (26.67%)2001001004
GO:0009628response to abiotic stimulus8 (26.67%)1110202001
GO:0044707single-multicellular organism process8 (26.67%)1000202003
GO:0006996organelle organization7 (23.33%)2100001003
GO:0030154cell differentiation6 (20.00%)0000002004
GO:0048869cellular developmental process6 (20.00%)0000002004
GO:0044260cellular macromolecule metabolic process6 (20.00%)1002001002
GO:0043170macromolecule metabolic process6 (20.00%)1002001002
GO:0050794regulation of cellular process6 (20.00%)1000001004
GO:0000003reproduction6 (20.00%)0000201003
GO:0048731system development6 (20.00%)1000201002
GO:0009058biosynthetic process5 (16.67%)1011001001
GO:0006725cellular aromatic compound metabolic process5 (16.67%)0010001003
GO:0044249cellular biosynthetic process5 (16.67%)1011001001
GO:0034641cellular nitrogen compound metabolic process5 (16.67%)0010001003
GO:0003006developmental process involved in reproduction5 (16.67%)0000201002
GO:0046483heterocycle metabolic process5 (16.67%)0010001003
GO:0006807nitrogen compound metabolic process5 (16.67%)0010001003
GO:1901360organic cyclic compound metabolic process5 (16.67%)0010001003
GO:1901576organic substance biosynthetic process5 (16.67%)1011001001
GO:0065008regulation of biological quality5 (16.67%)2101000001
GO:0022414reproductive process5 (16.67%)0000201002
GO:0042221response to chemical5 (16.67%)1011001001
GO:0009416response to light stimulus5 (16.67%)0000202001
GO:0009314response to radiation5 (16.67%)0000202001
GO:0044710single-organism metabolic process5 (16.67%)1010010002
GO:0051716cellular response to stimulus4 (13.33%)1010000002
GO:0010467gene expression4 (13.33%)0001001002
GO:0051704multi-organism process4 (13.33%)0011001001
GO:0006139nucleobase-containing compound metabolic process4 (13.33%)0000001003
GO:0009791post-embryonic development4 (13.33%)0000201001
GO:0090066regulation of anatomical structure size4 (13.33%)2100000001
GO:0032535regulation of cellular component size4 (13.33%)2100000001
GO:0016070RNA metabolic process3 (10.00%)0000001002
GO:0009653anatomical structure morphogenesis3 (10.00%)1000000002
GO:0019438aromatic compound biosynthetic process3 (10.00%)0010001001
GO:0048468cell development3 (10.00%)0000000003
GO:0034645cellular macromolecule biosynthetic process3 (10.00%)0001001001
GO:0044271cellular nitrogen compound biosynthetic process3 (10.00%)0010001001
GO:0048610cellular process involved in reproduction3 (10.00%)0000000003
GO:0044267cellular protein metabolic process3 (10.00%)0002000001
GO:0070887cellular response to chemical stimulus3 (10.00%)1010000001
GO:0048229gametophyte development3 (10.00%)0000001002
GO:0018130heterocycle biosynthetic process3 (10.00%)0010001001
GO:0009059macromolecule biosynthetic process3 (10.00%)0001001001
GO:0090304nucleic acid metabolic process3 (10.00%)0000001002
GO:0048513organ development3 (10.00%)1000000002
GO:0048285organelle fission3 (10.00%)2100000000
GO:1901362organic cyclic compound biosynthetic process3 (10.00%)0010001001
GO:0016559peroxisome fission3 (10.00%)2100000000
GO:0007031peroxisome organization3 (10.00%)2100000000
GO:0019538protein metabolic process3 (10.00%)0002000001
GO:0010468regulation of gene expression3 (10.00%)0000001002
GO:0060255regulation of macromolecule metabolic process3 (10.00%)0000001002
GO:0019222regulation of metabolic process3 (10.00%)0000001002
GO:0044375regulation of peroxisome size3 (10.00%)2100000000
GO:0048608reproductive structure development3 (10.00%)0000201000
GO:0061458reproductive system development3 (10.00%)0000201000
GO:0009607response to biotic stimulus3 (10.00%)0011001000
GO:0080167response to karrikin3 (10.00%)1110000000
GO:0010033response to organic substance3 (10.00%)1000001001
GO:0051707response to other organism3 (10.00%)0011001000
GO:0044702single organism reproductive process3 (10.00%)0000001002
GO:0044281small molecule metabolic process3 (10.00%)1010000001
GO:0009888tissue development3 (10.00%)1000000002
GO:0032774RNA biosynthetic process2 (6.67%)0000001001
GO:1901135carbohydrate derivative metabolic process2 (6.67%)0010000001
GO:0009056catabolic process2 (6.67%)1000000001
GO:0007154cell communication2 (6.67%)1000000001
GO:0000902cell morphogenesis2 (6.67%)0000000002
GO:0000904cell morphogenesis involved in differentiation2 (6.67%)0000000002
GO:0071554cell wall organization or biogenesis2 (6.67%)1010000000
GO:0044248cellular catabolic process2 (6.67%)1000000001
GO:0032989cellular component morphogenesis2 (6.67%)0000000002
GO:0044255cellular lipid metabolic process2 (6.67%)1000010000
GO:0071310cellular response to organic substance2 (6.67%)1000000001
GO:0007010cytoskeleton organization2 (6.67%)0000000002
GO:0006952defense response2 (6.67%)0011000000
GO:0048589developmental growth2 (6.67%)1000000001
GO:0009553embryo sac development2 (6.67%)0000001001
GO:1901657glycosyl compound metabolic process2 (6.67%)0010000001
GO:0040007growth2 (6.67%)1000000001
GO:0006955immune response2 (6.67%)0011000000
GO:0002376immune system process2 (6.67%)0011000000
GO:0045087innate immune response2 (6.67%)0011000000
GO:0006629lipid metabolic process2 (6.67%)1000010000
GO:0030258lipid modification2 (6.67%)1000010000
GO:0051179localization2 (6.67%)0010000001
GO:0033036macromolecule localization2 (6.67%)0010000001
GO:0009561megagametogenesis2 (6.67%)0000001001
GO:0048507meristem development2 (6.67%)1000000001
GO:0055046microgametogenesis2 (6.67%)0000000002
GO:0034654nucleobase-containing compound biosynthetic process2 (6.67%)0000001001
GO:0006082organic acid metabolic process2 (6.67%)1010000000
GO:1901575organic substance catabolic process2 (6.67%)1000000001
GO:1901564organonitrogen compound metabolic process2 (6.67%)0010000001
GO:0019637organophosphate metabolic process2 (6.67%)0000010001
GO:0055114oxidation-reduction process2 (6.67%)1010000000
GO:0043436oxoacid metabolic process2 (6.67%)1010000000
GO:0006796phosphate-containing compound metabolic process2 (6.67%)0000010001
GO:0006793phosphorus metabolic process2 (6.67%)0000010001
GO:0009648photoperiodism2 (6.67%)0000200000
GO:0048573photoperiodism, flowering2 (6.67%)0000200000
GO:0009555pollen development2 (6.67%)0000000002
GO:0048518positive regulation of biological process2 (6.67%)0001000001
GO:2001141regulation of RNA biosynthetic process2 (6.67%)0000001001
GO:0051252regulation of RNA metabolic process2 (6.67%)0000001001
GO:0009889regulation of biosynthetic process2 (6.67%)0000001001
GO:0031326regulation of cellular biosynthetic process2 (6.67%)0000001001
GO:2000112regulation of cellular macromolecule biosynthetic process2 (6.67%)0000001001
GO:0031323regulation of cellular metabolic process2 (6.67%)0000001001
GO:0050793regulation of developmental process2 (6.67%)1000000001
GO:0010556regulation of macromolecule biosynthetic process2 (6.67%)0000001001
GO:0048509regulation of meristem development2 (6.67%)1000000001
GO:2000026regulation of multicellular organismal development2 (6.67%)1000000001
GO:0051239regulation of multicellular organismal process2 (6.67%)1000000001
GO:0051171regulation of nitrogen compound metabolic process2 (6.67%)0000001001
GO:0019219regulation of nucleobase-containing compound metabolic process2 (6.67%)0000001001
GO:0080090regulation of primary metabolic process2 (6.67%)0000001001
GO:0006355regulation of transcription, DNA-dependent2 (6.67%)0000001001
GO:0009719response to endogenous stimulus2 (6.67%)1000001000
GO:0009620response to fungus2 (6.67%)0010001000
GO:0009725response to hormone2 (6.67%)1000001000
GO:0033993response to lipid2 (6.67%)1000001000
GO:1901700response to oxygen-containing compound2 (6.67%)1000001000
GO:0006950response to stress2 (6.67%)0011000000
GO:0048367shoot system development2 (6.67%)0000001001
GO:0007165signal transduction2 (6.67%)1000000001
GO:0023052signaling2 (6.67%)1000000001
GO:0044700single organism signaling2 (6.67%)1000000001
GO:0044711single-organism biosynthetic process2 (6.67%)1010000000
GO:0044712single-organism catabolic process2 (6.67%)1000000001
GO:0006351transcription, DNA-templated2 (6.67%)0000001001
GO:0010228vegetative to reproductive phase transition of meristem2 (6.67%)0000200000
GO:0006184GTP catabolic process1 (3.33%)0000000001
GO:0046039GTP metabolic process1 (3.33%)0000000001
GO:0016246RNA interference1 (3.33%)0000000001
GO:0006396RNA processing1 (3.33%)0000000001
GO:0016144S-glycoside biosynthetic process1 (3.33%)0010000000
GO:0016143S-glycoside metabolic process1 (3.33%)0010000000
GO:0030036actin cytoskeleton organization1 (3.33%)0000000001
GO:0007015actin filament organization1 (3.33%)0000000001
GO:0030041actin filament polymerization1 (3.33%)0000000001
GO:0030029actin filament-based process1 (3.33%)0000000001
GO:0045010actin nucleation1 (3.33%)0000000001
GO:0008154actin polymerization or depolymerization1 (3.33%)0000000001
GO:0009943adaxial/abaxial axis specification1 (3.33%)1000000000
GO:0009955adaxial/abaxial pattern specification1 (3.33%)1000000000
GO:0048532anatomical structure arrangement1 (3.33%)1000000000
GO:0019439aromatic compound catabolic process1 (3.33%)0000000001
GO:0009798axis specification1 (3.33%)1000000000
GO:0052543callose deposition in cell wall1 (3.33%)0010000000
GO:0052545callose localization1 (3.33%)0010000000
GO:1901137carbohydrate derivative biosynthetic process1 (3.33%)0010000000
GO:1901136carbohydrate derivative catabolic process1 (3.33%)0000000001
GO:0046394carboxylic acid biosynthetic process1 (3.33%)1000000000
GO:0046395carboxylic acid catabolic process1 (3.33%)1000000000
GO:0019752carboxylic acid metabolic process1 (3.33%)1000000000
GO:0007049cell cycle1 (3.33%)0000000001
GO:0022402cell cycle process1 (3.33%)0000000001
GO:0016049cell growth1 (3.33%)0000000001
GO:0009932cell tip growth1 (3.33%)0000000001
GO:0044036cell wall macromolecule metabolic process1 (3.33%)1000000000
GO:0042545cell wall modification1 (3.33%)0010000000
GO:0071555cell wall organization1 (3.33%)0010000000
GO:0052386cell wall thickening1 (3.33%)0010000000
GO:0022607cellular component assembly1 (3.33%)0000000001
GO:0044085cellular component biogenesis1 (3.33%)0000000001
GO:0044242cellular lipid catabolic process1 (3.33%)1000000000
GO:0051641cellular localization1 (3.33%)0010000000
GO:0034622cellular macromolecular complex assembly1 (3.33%)0000000001
GO:0070727cellular macromolecule localization1 (3.33%)0010000000
GO:0044270cellular nitrogen compound catabolic process1 (3.33%)0000000001
GO:0022412cellular process involved in reproduction in multicellular organism1 (3.33%)0000000001
GO:0043623cellular protein complex assembly1 (3.33%)0000000001
GO:0006464cellular protein modification process1 (3.33%)0000000001
GO:0036294cellular response to decreased oxygen levels1 (3.33%)0010000000
GO:0071359cellular response to dsRNA1 (3.33%)0000000001
GO:0071495cellular response to endogenous stimulus1 (3.33%)1000000000
GO:0071370cellular response to gibberellin stimulus1 (3.33%)1000000000
GO:0032870cellular response to hormone stimulus1 (3.33%)1000000000
GO:0071456cellular response to hypoxia1 (3.33%)0010000000
GO:0071396cellular response to lipid1 (3.33%)1000000000
GO:1901699cellular response to nitrogen compound1 (3.33%)0000000001
GO:0071407cellular response to organic cyclic compound1 (3.33%)0000000001
GO:0071453cellular response to oxygen levels1 (3.33%)0010000000
GO:1901701cellular response to oxygen-containing compound1 (3.33%)1000000000
GO:0033554cellular response to stress1 (3.33%)0010000000
GO:0016568chromatin modification1 (3.33%)0000000001
GO:0006325chromatin organization1 (3.33%)0000000001
GO:0051276chromosome organization1 (3.33%)0000000001
GO:0007623circadian rhythm1 (3.33%)1000000000
GO:0016569covalent chromatin modification1 (3.33%)0000000001
GO:0052542defense response by callose deposition1 (3.33%)0010000000
GO:0052544defense response by callose deposition in cell wall1 (3.33%)0010000000
GO:0052482defense response by cell wall thickening1 (3.33%)0010000000
GO:0042742defense response to bacterium1 (3.33%)0010000000
GO:0050832defense response to fungus1 (3.33%)0010000000
GO:0002213defense response to insect1 (3.33%)0010000000
GO:0098542defense response to other organism1 (3.33%)0010000000
GO:0070988demethylation1 (3.33%)0000000001
GO:0016311dephosphorylation1 (3.33%)0000010000
GO:0009855determination of bilateral symmetry1 (3.33%)1000000000
GO:0048588developmental cell growth1 (3.33%)0000000001
GO:0060560developmental growth involved in morphogenesis1 (3.33%)0000000001
GO:0016102diterpenoid biosynthetic process1 (3.33%)1000000000
GO:0016101diterpenoid metabolic process1 (3.33%)1000000000
GO:0031050dsRNA fragmentation1 (3.33%)0000000001
GO:0009559embryo sac central cell differentiation1 (3.33%)0000001000
GO:0009913epidermal cell differentiation1 (3.33%)0000000001
GO:0008544epidermis development1 (3.33%)0000000001
GO:0030855epithelial cell differentiation1 (3.33%)0000000001
GO:0060429epithelium development1 (3.33%)0000000001
GO:0051234establishment of localization1 (3.33%)0000000001
GO:0045184establishment of protein localization1 (3.33%)0000000001
GO:0045229external encapsulating structure organization1 (3.33%)0010000000
GO:0006635fatty acid beta-oxidation1 (3.33%)1000000000
GO:0009062fatty acid catabolic process1 (3.33%)1000000000
GO:0006631fatty acid metabolic process1 (3.33%)1000000000
GO:0019395fatty acid oxidation1 (3.33%)1000000000
GO:0007143female meiosis1 (3.33%)0000000001
GO:0009908flower development1 (3.33%)0000001000
GO:0007276gamete generation1 (3.33%)0000000001
GO:0016458gene silencing1 (3.33%)0000000001
GO:0031047gene silencing by RNA1 (3.33%)0000000001
GO:0035195gene silencing by miRNA1 (3.33%)0000000001
GO:0009740gibberellic acid mediated signaling pathway1 (3.33%)1000000000
GO:0009686gibberellin biosynthetic process1 (3.33%)1000000000
GO:0010476gibberellin mediated signaling pathway1 (3.33%)1000000000
GO:0009685gibberellin metabolic process1 (3.33%)1000000000
GO:0019761glucosinolate biosynthetic process1 (3.33%)0010000000
GO:0019760glucosinolate metabolic process1 (3.33%)0010000000
GO:0046486glycerolipid metabolic process1 (3.33%)0000010000
GO:0006650glycerophospholipid metabolic process1 (3.33%)0000010000
GO:0019758glycosinolate biosynthetic process1 (3.33%)0010000000
GO:0019757glycosinolate metabolic process1 (3.33%)0010000000
GO:1901659glycosyl compound biosynthetic process1 (3.33%)0010000000
GO:1901658glycosyl compound catabolic process1 (3.33%)0000000001
GO:1901069guanosine-containing compound catabolic process1 (3.33%)0000000001
GO:1901068guanosine-containing compound metabolic process1 (3.33%)0000000001
GO:0046700heterocycle catabolic process1 (3.33%)0000000001
GO:0033169histone H3-K9 demethylation1 (3.33%)0000000001
GO:0016577histone demethylation1 (3.33%)0000000001
GO:0070076histone lysine demethylation1 (3.33%)0000000001
GO:0016570histone modification1 (3.33%)0000000001
GO:0009755hormone-mediated signaling pathway1 (3.33%)1000000000
GO:0009759indole glucosinolate biosynthetic process1 (3.33%)0010000000
GO:0042343indole glucosinolate metabolic process1 (3.33%)0010000000
GO:0042435indole-containing compound biosynthetic process1 (3.33%)0010000000
GO:0042430indole-containing compound metabolic process1 (3.33%)0010000000
GO:0009682induced systemic resistance1 (3.33%)0010000000
GO:0051701interaction with host1 (3.33%)0001000000
GO:0044419interspecies interaction between organisms1 (3.33%)0001000000
GO:0035556intracellular signal transduction1 (3.33%)0000000001
GO:0008299isoprenoid biosynthetic process1 (3.33%)1000000000
GO:0006720isoprenoid metabolic process1 (3.33%)1000000000
GO:0000741karyogamy1 (3.33%)0000001000
GO:0048366leaf development1 (3.33%)0000000001
GO:0008610lipid biosynthetic process1 (3.33%)1000000000
GO:0016042lipid catabolic process1 (3.33%)1000000000
GO:0034440lipid oxidation1 (3.33%)1000000000
GO:0065003macromolecular complex assembly1 (3.33%)0000000001
GO:0043933macromolecular complex subunit organization1 (3.33%)0000000001
GO:0043412macromolecule modification1 (3.33%)0000000001
GO:0048232male gamete generation1 (3.33%)0000000001
GO:0007140male meiosis1 (3.33%)0000000001
GO:0007126meiosis1 (3.33%)0000000001
GO:0051321meiotic cell cycle1 (3.33%)0000000001
GO:0035266meristem growth1 (3.33%)1000000000
GO:0010014meristem initiation1 (3.33%)1000000000
GO:0010073meristem maintenance1 (3.33%)1000000000
GO:0009933meristem structural organization1 (3.33%)1000000000
GO:0010586miRNA metabolic process1 (3.33%)0000000001
GO:0000226microtubule cytoskeleton organization1 (3.33%)0000000001
GO:0007017microtubule-based process1 (3.33%)0000000001
GO:0044003modification by symbiont of host morphology or physiology1 (3.33%)0001000000
GO:0035821modification of morphology or physiology of other organism1 (3.33%)0001000000
GO:0051817modification of morphology or physiology of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052255modulation by organism of defense response of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052552modulation by organism of immune response of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052306modulation by organism of innate immune response in other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052031modulation by symbiont of host defense response1 (3.33%)0001000000
GO:0052553modulation by symbiont of host immune response1 (3.33%)0001000000
GO:0052167modulation by symbiont of host innate immune response1 (3.33%)0001000000
GO:0072329monocarboxylic acid catabolic process1 (3.33%)1000000000
GO:0032787monocarboxylic acid metabolic process1 (3.33%)1000000000
GO:0044706multi-multicellular organism process1 (3.33%)0000000001
GO:0044703multi-organism reproductive process1 (3.33%)0000000001
GO:0032504multicellular organism reproduction1 (3.33%)0000000001
GO:0048609multicellular organismal reproductive process1 (3.33%)0000000001
GO:0034660ncRNA metabolic process1 (3.33%)0000000001
GO:0048519negative regulation of biological process1 (3.33%)0000000001
GO:0045596negative regulation of cell differentiation1 (3.33%)0000000001
GO:0048523negative regulation of cellular process1 (3.33%)0000000001
GO:0051093negative regulation of developmental process1 (3.33%)0000000001
GO:0010629negative regulation of gene expression1 (3.33%)0000000001
GO:0010605negative regulation of macromolecule metabolic process1 (3.33%)0000000001
GO:0009892negative regulation of metabolic process1 (3.33%)0000000001
GO:0034655nucleobase-containing compound catabolic process1 (3.33%)0000000001
GO:0055086nucleobase-containing small molecule metabolic process1 (3.33%)0000000001
GO:0009164nucleoside catabolic process1 (3.33%)0000000001
GO:0009116nucleoside metabolic process1 (3.33%)0000000001
GO:1901292nucleoside phosphate catabolic process1 (3.33%)0000000001
GO:0006753nucleoside phosphate metabolic process1 (3.33%)0000000001
GO:0009143nucleoside triphosphate catabolic process1 (3.33%)0000000001
GO:0009141nucleoside triphosphate metabolic process1 (3.33%)0000000001
GO:0009166nucleotide catabolic process1 (3.33%)0000000001
GO:0009117nucleotide metabolic process1 (3.33%)0000000001
GO:0006997nucleus organization1 (3.33%)0000001000
GO:0048284organelle fusion1 (3.33%)0000001000
GO:0016053organic acid biosynthetic process1 (3.33%)1000000000
GO:0016054organic acid catabolic process1 (3.33%)1000000000
GO:1901361organic cyclic compound catabolic process1 (3.33%)0000000001
GO:0071702organic substance transport1 (3.33%)0000000001
GO:1901566organonitrogen compound biosynthetic process1 (3.33%)0010000000
GO:1901565organonitrogen compound catabolic process1 (3.33%)0000000001
GO:0046434organophosphate catabolic process1 (3.33%)0000000001
GO:0052257pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052033pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1 (3.33%)0001000000
GO:0052308pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052169pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response1 (3.33%)0001000000
GO:0007389pattern specification process1 (3.33%)1000000000
GO:0010087phloem or xylem histogenesis1 (3.33%)1000000000
GO:0046856phosphatidylinositol dephosphorylation1 (3.33%)0000010000
GO:0046488phosphatidylinositol metabolic process1 (3.33%)0000010000
GO:0046839phospholipid dephosphorylation1 (3.33%)0000010000
GO:0006644phospholipid metabolic process1 (3.33%)0000010000
GO:0048827phyllome development1 (3.33%)0000000001
GO:0010197polar nucleus fusion1 (3.33%)0000001000
GO:0009944polarity specification of adaxial/abaxial axis1 (3.33%)1000000000
GO:0048235pollen sperm cell differentiation1 (3.33%)0000000001
GO:0048868pollen tube development1 (3.33%)0000000001
GO:0009860pollen tube growth1 (3.33%)0000000001
GO:0009856pollination1 (3.33%)0000000001
GO:0033037polysaccharide localization1 (3.33%)0010000000
GO:0052510positive regulation by organism of defense response of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052555positive regulation by organism of immune response of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052305positive regulation by organism of innate immune response in other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0052509positive regulation by symbiont of host defense response1 (3.33%)0001000000
GO:0052556positive regulation by symbiont of host immune response1 (3.33%)0001000000
GO:0052166positive regulation by symbiont of host innate immune response1 (3.33%)0001000000
GO:0030838positive regulation of actin filament polymerization1 (3.33%)0000000001
GO:0051130positive regulation of cellular component organization1 (3.33%)0000000001
GO:0048522positive regulation of cellular process1 (3.33%)0000000001
GO:0051495positive regulation of cytoskeleton organization1 (3.33%)0000000001
GO:0031349positive regulation of defense response1 (3.33%)0001000000
GO:0050778positive regulation of immune response1 (3.33%)0001000000
GO:0002684positive regulation of immune system process1 (3.33%)0001000000
GO:0045089positive regulation of innate immune response1 (3.33%)0001000000
GO:0010638positive regulation of organelle organization1 (3.33%)0000000001
GO:0031334positive regulation of protein complex assembly1 (3.33%)0000000001
GO:0032273positive regulation of protein polymerization1 (3.33%)0000000001
GO:0048584positive regulation of response to stimulus1 (3.33%)0001000000
GO:0016441posttranscriptional gene silencing1 (3.33%)0000000001
GO:0035194posttranscriptional gene silencing by RNA1 (3.33%)0000000001
GO:0010608posttranscriptional regulation of gene expression1 (3.33%)0000000001
GO:0010599production of lsiRNA involved in RNA interference1 (3.33%)0000000001
GO:0035196production of miRNAs involved in gene silencing by miRNA1 (3.33%)0000000001
GO:0030422production of siRNA involved in RNA interference1 (3.33%)0000000001
GO:0070918production of small RNA involved in gene silencing by RNA1 (3.33%)0000000001
GO:0010267production of ta-siRNAs involved in RNA interference1 (3.33%)0000000001
GO:0006461protein complex assembly1 (3.33%)0000000001
GO:0070271protein complex biogenesis1 (3.33%)0000000001
GO:0071822protein complex subunit organization1 (3.33%)0000000001
GO:0008214protein dealkylation1 (3.33%)0000000001
GO:0006482protein demethylation1 (3.33%)0000000001
GO:0006457protein folding1 (3.33%)0001000000
GO:0008104protein localization1 (3.33%)0000000001
GO:0036211protein modification process1 (3.33%)0000000001
GO:0051258protein polymerization1 (3.33%)0000000001
GO:0015031protein transport1 (3.33%)0000000001
GO:0006152purine nucleoside catabolic process1 (3.33%)0000000001
GO:0042278purine nucleoside metabolic process1 (3.33%)0000000001
GO:0009146purine nucleoside triphosphate catabolic process1 (3.33%)0000000001
GO:0009144purine nucleoside triphosphate metabolic process1 (3.33%)0000000001
GO:0006195purine nucleotide catabolic process1 (3.33%)0000000001
GO:0006163purine nucleotide metabolic process1 (3.33%)0000000001
GO:0046130purine ribonucleoside catabolic process1 (3.33%)0000000001
GO:0046128purine ribonucleoside metabolic process1 (3.33%)0000000001
GO:0009207purine ribonucleoside triphosphate catabolic process1 (3.33%)0000000001
GO:0009205purine ribonucleoside triphosphate metabolic process1 (3.33%)0000000001
GO:0009154purine ribonucleotide catabolic process1 (3.33%)0000000001
GO:0009150purine ribonucleotide metabolic process1 (3.33%)0000000001
GO:0072523purine-containing compound catabolic process1 (3.33%)0000000001
GO:0072521purine-containing compound metabolic process1 (3.33%)0000000001
GO:0003002regionalization1 (3.33%)1000000000
GO:0032956regulation of actin cytoskeleton organization1 (3.33%)0000000001
GO:0030832regulation of actin filament length1 (3.33%)0000000001
GO:0030833regulation of actin filament polymerization1 (3.33%)0000000001
GO:0032970regulation of actin filament-based process1 (3.33%)0000000001
GO:0008064regulation of actin polymerization or depolymerization1 (3.33%)0000000001
GO:0045595regulation of cell differentiation1 (3.33%)0000000001
GO:0044087regulation of cellular component biogenesis1 (3.33%)0000000001
GO:0051128regulation of cellular component organization1 (3.33%)0000000001
GO:0051493regulation of cytoskeleton organization1 (3.33%)0000000001
GO:0031347regulation of defense response1 (3.33%)0001000000
GO:0040034regulation of development, heterochronic1 (3.33%)0000000001
GO:0048638regulation of developmental growth1 (3.33%)1000000000
GO:0040029regulation of gene expression, epigenetic1 (3.33%)0000000001
GO:0040008regulation of growth1 (3.33%)1000000000
GO:0050776regulation of immune response1 (3.33%)0001000000
GO:0002682regulation of immune system process1 (3.33%)0001000000
GO:0045088regulation of innate immune response1 (3.33%)0001000000
GO:0010075regulation of meristem growth1 (3.33%)1000000000
GO:0033043regulation of organelle organization1 (3.33%)0000000001
GO:0043254regulation of protein complex assembly1 (3.33%)0000000001
GO:0032271regulation of protein polymerization1 (3.33%)0000000001
GO:0048583regulation of response to stimulus1 (3.33%)0001000000
GO:0080134regulation of response to stress1 (3.33%)0001000000
GO:1902183regulation of shoot apical meristem development1 (3.33%)0000000001
GO:0010119regulation of stomatal movement1 (3.33%)0000000001
GO:0009737response to abscisic acid1 (3.33%)0000001000
GO:0097305response to alcohol1 (3.33%)0000001000
GO:0009617response to bacterium1 (3.33%)0010000000
GO:0046686response to cadmium ion1 (3.33%)0001000000
GO:0010201response to continuous far red light stimulus by the high-irradiance response system1 (3.33%)0000001000
GO:0036293response to decreased oxygen levels1 (3.33%)0010000000
GO:0052173response to defenses of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0043331response to dsRNA1 (3.33%)0000000001
GO:0010218response to far red light1 (3.33%)0000001000
GO:0009739response to gibberellin stimulus1 (3.33%)1000000000
GO:0075136response to host1 (3.33%)0001000000
GO:0052200response to host defenses1 (3.33%)0001000000
GO:0052572response to host immune response1 (3.33%)0001000000
GO:0001666response to hypoxia1 (3.33%)0010000000
GO:0052564response to immune response of other organism involved in symbiotic interaction1 (3.33%)0001000000
GO:0010035response to inorganic substance1 (3.33%)0001000000
GO:0009625response to insect1 (3.33%)0010000000
GO:0010038response to metal ion1 (3.33%)0001000000
GO:1901698response to nitrogen compound1 (3.33%)0000000001
GO:0014070response to organic cyclic compound1 (3.33%)0000000001
GO:0070482response to oxygen levels1 (3.33%)0010000000
GO:0009639response to red or far red light1 (3.33%)0000001000
GO:0009608response to symbiont1 (3.33%)0000001000
GO:0009610response to symbiotic fungus1 (3.33%)0000001000
GO:0048511rhythmic process1 (3.33%)1000000000
GO:0042454ribonucleoside catabolic process1 (3.33%)0000000001
GO:0009119ribonucleoside metabolic process1 (3.33%)0000000001
GO:0009203ribonucleoside triphosphate catabolic process1 (3.33%)0000000001
GO:0009199ribonucleoside triphosphate metabolic process1 (3.33%)0000000001
GO:0009261ribonucleotide catabolic process1 (3.33%)0000000001
GO:0009259ribonucleotide metabolic process1 (3.33%)0000000001
GO:0019693ribose phosphate metabolic process1 (3.33%)0000000001
GO:0019748secondary metabolic process1 (3.33%)0010000000
GO:0044550secondary metabolite biosynthetic process1 (3.33%)0010000000
GO:0019953sexual reproduction1 (3.33%)0000000001
GO:1902182shoot apical meristem development1 (3.33%)0000000001
GO:0043588skin development1 (3.33%)0000000001
GO:0007264small GTPase mediated signal transduction1 (3.33%)0000000001
GO:0044283small molecule biosynthetic process1 (3.33%)1000000000
GO:0044282small molecule catabolic process1 (3.33%)1000000000
GO:0035019somatic stem cell maintenance1 (3.33%)0000000001
GO:0065001specification of axis polarity1 (3.33%)1000000000
GO:0009799specification of symmetry1 (3.33%)1000000000
GO:0048864stem cell development1 (3.33%)0000000001
GO:0048863stem cell differentiation1 (3.33%)0000000001
GO:0019827stem cell maintenance1 (3.33%)0000000001
GO:0010118stomatal movement1 (3.33%)0000000001
GO:0044272sulfur compound biosynthetic process1 (3.33%)0010000000
GO:0006790sulfur compound metabolic process1 (3.33%)0010000000
GO:0044403symbiosis, encompassing mutualism through parasitism1 (3.33%)0001000000
GO:0016114terpenoid biosynthetic process1 (3.33%)1000000000
GO:0006721terpenoid metabolic process1 (3.33%)1000000000
GO:0006412translation1 (3.33%)0001000000
GO:0006414translational elongation1 (3.33%)0001000000
GO:0006810transport1 (3.33%)0000000001
GO:0010026trichome differentiation1 (3.33%)0000000001
GO:0010090trichome morphogenesis1 (3.33%)0000000001
GO:0009826unidimensional cell growth1 (3.33%)0000000001
GO:0010050vegetative phase change1 (3.33%)0000000001
GO:0010089xylem development1 (3.33%)1000000000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding18 (60.00%)2113303005
GO:0005515protein binding11 (36.67%)2102003003
GO:1901363heterocyclic compound binding9 (30.00%)0012101004
GO:0097159organic cyclic compound binding9 (30.00%)0012101004
GO:0003824catalytic activity7 (23.33%)1012010002
GO:0043167ion binding7 (23.33%)0012101002
GO:0003676nucleic acid binding7 (23.33%)0002101003
GO:0043169cation binding4 (13.33%)0010101001
GO:0016787hydrolase activity4 (13.33%)0002010001
GO:0042802identical protein binding4 (13.33%)2100001000
GO:0046872metal ion binding4 (13.33%)0010101001
GO:1901265nucleoside phosphate binding4 (13.33%)0002100001
GO:0000166nucleotide binding4 (13.33%)0002100001
GO:0036094small molecule binding4 (13.33%)0002100001
GO:0046914transition metal ion binding4 (13.33%)0010101001
GO:0003677DNA binding3 (10.00%)0000001002
GO:0043168anion binding3 (10.00%)0002000001
GO:0097367carbohydrate derivative binding3 (10.00%)0002000001
GO:0016817hydrolase activity, acting on acid anhydrides3 (10.00%)0002000001
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides3 (10.00%)0002000001
GO:0001882nucleoside binding3 (10.00%)0002000001
GO:0017111nucleoside-triphosphatase activity3 (10.00%)0002000001
GO:0001883purine nucleoside binding3 (10.00%)0002000001
GO:0017076purine nucleotide binding3 (10.00%)0002000001
GO:0032550purine ribonucleoside binding3 (10.00%)0002000001
GO:0035639purine ribonucleoside triphosphate binding3 (10.00%)0002000001
GO:0032555purine ribonucleotide binding3 (10.00%)0002000001
GO:0016462pyrophosphatase activity3 (10.00%)0002000001
GO:0032549ribonucleoside binding3 (10.00%)0002000001
GO:0032553ribonucleotide binding3 (10.00%)0002000001
GO:0008270zinc ion binding3 (10.00%)0000101001
GO:0005525GTP binding2 (6.67%)0001000001
GO:0003924GTPase activity2 (6.67%)0001000001
GO:0003723RNA binding2 (6.67%)0001000001
GO:0030246carbohydrate binding2 (6.67%)0000200000
GO:0003682chromatin binding2 (6.67%)0000000002
GO:0019001guanyl nucleotide binding2 (6.67%)0001000001
GO:0032561guanyl ribonucleotide binding2 (6.67%)0001000001
GO:0005524ATP binding1 (3.33%)0001000000
GO:0004004ATP-dependent RNA helicase activity1 (3.33%)0001000000
GO:0008026ATP-dependent helicase activity1 (3.33%)0001000000
GO:0016887ATPase activity1 (3.33%)0001000000
GO:0042623ATPase activity, coupled1 (3.33%)0001000000
GO:0003724RNA helicase activity1 (3.33%)0001000000
GO:0008186RNA-dependent ATPase activity1 (3.33%)0001000000
GO:0016881acid-amino acid ligase activity1 (3.33%)0000000001
GO:0030554adenyl nucleotide binding1 (3.33%)0001000000
GO:0032559adenyl ribonucleotide binding1 (3.33%)0001000000
GO:0016759cellulose synthase activity1 (3.33%)1000000000
GO:0019899enzyme binding1 (3.33%)0000000001
GO:0046527glucosyltransferase activity1 (3.33%)1000000000
GO:0031072heat shock protein binding1 (3.33%)0001000000
GO:0004386helicase activity1 (3.33%)0001000000
GO:0020037heme binding1 (3.33%)0010000000
GO:0005506iron ion binding1 (3.33%)0010000000
GO:0019900kinase binding1 (3.33%)0000000001
GO:0016874ligase activity1 (3.33%)0000000001
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (3.33%)0000000001
GO:0035198miRNA binding1 (3.33%)0000000001
GO:0060089molecular transducer activity1 (3.33%)0000001000
GO:0004497monooxygenase activity1 (3.33%)0010000000
GO:0001071nucleic acid binding transcription factor activity1 (3.33%)0000001000
GO:0016491oxidoreductase activity1 (3.33%)0010000000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1 (3.33%)0010000000
GO:0046983protein dimerization activity1 (3.33%)0000001000
GO:0046982protein heterodimerization activity1 (3.33%)0000001000
GO:0042803protein homodimerization activity1 (3.33%)0000001000
GO:0019901protein kinase binding1 (3.33%)0000000001
GO:0070035purine NTP-dependent helicase activity1 (3.33%)0001000000
GO:0043565sequence-specific DNA binding1 (3.33%)0000001000
GO:0003700sequence-specific DNA binding transcription factor activity1 (3.33%)0000001000
GO:0004871signal transducer activity1 (3.33%)0000001000
GO:0046906tetrapyrrole binding1 (3.33%)0010000000
GO:0016740transferase activity1 (3.33%)1000000000
GO:0016757transferase activity, transferring glycosyl groups1 (3.33%)1000000000
GO:0016758transferase activity, transferring hexosyl groups1 (3.33%)1000000000
GO:0003746translation elongation factor activity1 (3.33%)0001000000
GO:0008135translation factor activity, nucleic acid binding1 (3.33%)0001000000
GO:0051082unfolded protein binding1 (3.33%)0001000000