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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps62480
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps62480
Thalassiosira pseudonana
7.5e-240
830.9
436
100.0
ps00G72050
Pseudo-nitzschia multiseries
2.9e-159
563.1
439
67.7
Sro1704_g292350
Seminavis robusta
5.2e-156
552.4
477
62.3
Sro1912_g304970
Seminavis robusta
8.8e-156
551.6
477
62.3
gene3152
Fragilariopsis cylindrus
1.1e-155
551.2
440
65.5
PSNMU-V1.4_AUG-EV-PASAV3_0074050
Pseudo-nitzschia multistriata
3.7e-154
546.2
450
65.3
PSNMU-V1.4_AUG-EV-PASAV3_0017470
Pseudo-nitzschia multistriata
4.5e-152
539.3
450
64.7
ptri76260
Phaeodactylum tricornutum
1.9e-150
533.9
434
63.4
sya00G252880
Synedra acus
3.2e-150
533.1
437
65.0
fso39460
Fistulifera solaris
5.2e-148
525.8
432
64.1
fso109370
Fistulifera solaris
2.6e-147
523.5
432
63.2
gene8206
Fragilariopsis cylindrus
2.4e-137
490.3
397
64.5
Naga_100005g53
Nannochloropsis gaditana
8.8e-132
471.9
434
57.4
Ec-02_005800
Ectocarpus siliculosus
7.0e-129
462.2
434
56.2
Pp3c22_1880
Physcomitrella patens
1.6e-120
434.5
435
52.4
Pp3c19_4580
Physcomitrella patens
1.3e-119
431.4
438
52.5
AT2G32040
Arabidopsis thaliana
6.4e-114
412.5
441
48.8
CM14G03180
Cyanidioschyzon merolae
6.4e-114
412.5
455
48.1
Pp3c10_2680
Physcomitrella patens
6.0e-112
406.0
440
49.3
ccr24800
Chondrus crispus
3.0e-111
403.7
435
47.6
CC00G177780
Cyclotella cryptica
8.3e-106
385.6
257
77.8
emh496500
Emiliania huxleyi
3.9e-95
350.1
449
45.0
AA0011G00190
Aureococcus anophagefferens
8.4e-82
305.8
441
41.7
Cre01.g007737
Chlamydomonas reinhardtii
8.7e-79
295.8
446
40.6
pte470920
Paramecium tetraurelia
4.8e-61
236.9
426
34.0
pte544980
Paramecium tetraurelia
1.1e-60
235.7
425
33.6
pte581520
Paramecium tetraurelia
1.1e-60
235.7
426
34.0
pte309560
Paramecium tetraurelia
2.6e-59
231.1
421
33.7
pte555540
Paramecium tetraurelia
1.2e-56
222.2
435
31.7
pte496580
Paramecium tetraurelia
1.9e-54
214.9
420
30.5
Cre14.g615900
Chlamydomonas reinhardtii
3.3e-54
214.2
645
28.4
Pp3c25_9740
Physcomitrella patens
9.1e-52
206.1
427
31.1
pte164090
Paramecium tetraurelia
1.2e-51
205.7
420
29.0
pte563920
Paramecium tetraurelia
1.2e-51
205.7
420
32.6
pte571930
Paramecium tetraurelia
1.2e-51
205.7
420
32.6
Cre06.g311000
Chlamydomonas reinhardtii
3.8e-50
200.7
728
24.7
AT5G25050
Arabidopsis thaliana
1.1e-46
189.1
435
29.9
AT1G79710
Arabidopsis thaliana
1.5e-46
188.7
434
31.1
CC00G145070
Cyclotella cryptica
2.6e-46
188.0
115
80.0
Naga_100076g12
Nannochloropsis gaditana
6.5e-42
173.3
471
28.9
AT5G54860
Arabidopsis thaliana
1.4e-39
165.6
472
27.1
Pp3c1_14900
Physcomitrella patens
3.9e-39
164.1
442
29.6
AT5G25040
Arabidopsis thaliana
5.2e-39
163.7
436
27.5
AT5G10820
Arabidopsis thaliana
1.7e-37
158.7
429
26.8
pte495010
Paramecium tetraurelia
3.7e-37
157.5
374
29.4
Pp3c18_11000
Physcomitrella patens
8.2e-37
156.4
431
27.4
Cre03.g162450
Chlamydomonas reinhardtii
2.2e-34
148.3
509
27.5
Ec-04_002850
Ectocarpus siliculosus
6.1e-32
140.2
436
28.4
Pp3c21_8500
Physcomitrella patens
1.5e-30
135.6
423
27.2
Pp3c1_36490
Physcomitrella patens
3.3e-30
134.4
477
26.0
Naga_100040g39
Nannochloropsis gaditana
9.7e-30
132.9
372
27.4
sya00G151360
Synedra acus
9.7e-30
132.9
440
25.2
fso164950
Fistulifera solaris
1.7e-29
132.1
432
27.3
fso138940
Fistulifera solaris
2.2e-29
131.7
432
27.3
Naga_100007g116
Nannochloropsis gaditana
2.2e-29
131.7
390
25.9
sya00G37910
Synedra acus
2.2e-29
131.7
432
26.6
ptri75060
Phaeodactylum tricornutum
2.8e-29
131.3
453
27.4
AT1G04570
Arabidopsis thaliana
1.6e-27
125.6
418
28.9
AT1G64890
Arabidopsis thaliana
2.0e-27
125.2
421
27.6
gene2300
Fragilariopsis cylindrus
2.0e-27
125.2
450
26.7
CC00G87780
Cyclotella cryptica
4.5e-27
124.0
462
25.3
ps00G191520
Pseudo-nitzschia multiseries
4.5e-27
124.0
454
26.0
Ec-08_001180
Ectocarpus siliculosus
7.7e-27
123.2
433
27.0
AA0010G02330
Aureococcus anophagefferens
1.0e-26
122.9
400
29.5
tps156500
Thalassiosira pseudonana
1.0e-26
122.9
405
26.2
fso102370
Fistulifera solaris
2.9e-26
121.3
443
25.3
fso192340
Fistulifera solaris
2.9e-26
121.3
442
24.9
fso154610
Fistulifera solaris
8.5e-26
119.8
456
25.4
Ec-10_000510
Ectocarpus siliculosus
1.5e-25
119.0
434
25.3
Sro84_g044770
Seminavis robusta
5.5e-25
117.1
433
25.6
ptri36870
Phaeodactylum tricornutum
1.6e-24
115.5
459
25.3
fso187500
Fistulifera solaris
4.7e-24
114.0
456
24.6
emh549850
Emiliania huxleyi
8.0e-24
113.2
283
31.8
emh288360
Emiliania huxleyi
1.5e-22
109.0
98
52.0
Sro130_g062000
Seminavis robusta
5.7e-22
107.1
452
24.8
AT2G33280
Arabidopsis thaliana
1.7e-21
105.5
378
27.5
Sro1997_g310080
Seminavis robusta
4.1e-20
100.9
440
22.7
AA0010G03100
Aureococcus anophagefferens
5.4e-20
100.5
436
24.8
ccr56620
Chondrus crispus
4.5e-19
97.4
430
24.9
emh540610
Emiliania huxleyi
6.8e-15
83.6
446
24.0
CC00G33790
Cyclotella cryptica
1.7e-13
79.0
480
23.5
emh565100
Emiliania huxleyi
1.8e-12
75.5
126
31.7
emh22610
Emiliania huxleyi
2.7e-11
71.6
75
48.0
tps205230
Thalassiosira pseudonana
2.8e-08
61.6
455
21.3
CC00G47860
Cyclotella cryptica
2.3e-07
58.5
179
27.4
tho150100
Thalassiosira oceanica
1.5e-06
55.8
181
23.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (10 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing