Gene: tps62480 (Thalassiosira pseudonana)

Overview top

Gene Identifier
tps62480
Transcript Identifier
tps62480.1
Gene Type
Coding gene
Location
1 : 2176246-2177553 : negative

Family Information

Homologous gene family
HOM02SEM000739
(59 genes in 19 species)
specific family
Orthologous gene family
ORTHO02SEM000742
(59 genes in 19 species)
specific family

Descriptions

gene_descr
hypothetical protein
eggnog_description
transporter

Identifiers

Type Value
pidEED96570
old_giTHAPSDRAFT_31372
UniprotB8BRN5
STRING35128.Thaps31372

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006810
IEA
InterProtransport
GO:0071702
IEA
PLAZA Integrative Orthologyorganic substance transport AT2G32040
GO:0051958
IEA
EggNOGmappermethotrexate transport
GO:0042493
IEA
PLAZA Integrative Orthologyresponse to drug AT2G32040
GO:0042886
IEA
PLAZA Integrative Orthologyamide transport AT2G32040
GO:0071705
IEA
PLAZA Integrative Orthologynitrogen compound transport AT2G32040
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT2G32040
GO:0015849
IEA
PLAZA Integrative Orthologyorganic acid transport AT2G32040
GO:0006811
IEA
PLAZA Integrative Orthologyion transport AT2G32040
GO:0006820
IEA
PLAZA Integrative Orthologyanion transport AT2G32040
GO:0015893
IEA
PLAZA Integrative Orthologydrug transport AT2G32040
GO:0015711
IEA
PLAZA Integrative Orthologyorganic anion transport AT2G32040
GO:0046942
IEA
PLAZA Integrative Orthologycarboxylic acid transport AT2G32040
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT2G32040
GO:0006835
IEA
EggNOGmapperdicarboxylic acid transport
GO:0015885
IEA
EggNOGmapper5-formyltetrahydrofolate transport
GO:0006865
IEA
EggNOGmapperamino acid transport
GO:0015884
IEA
EggNOGmapperfolic acid transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042887
IEA
PLAZA Integrative Orthologyamide transmembrane transporter activity AT2G32040
GO:0090482
IEA
PLAZA Integrative Orthologyvitamin transmembrane transporter activity AT2G32040
GO:0005342
IEA
PLAZA Integrative Orthologyorganic acid transmembrane transporter activity AT2G32040
GO:0022857
IEA
PLAZA Integrative Orthologytransmembrane transporter activity AT2G32040
GO:0008517
IEA
EggNOGmapperfolic acid transmembrane transporter activity
GO:0015238
IEA
PLAZA Integrative Orthologydrug transmembrane transporter activity AT2G32040
GO:0015318
IEA
PLAZA Integrative Orthologyinorganic molecular entity transmembrane transporter activity AT2G32040
GO:0008509
IEA
PLAZA Integrative Orthologyanion transmembrane transporter activity AT2G32040
GO:0046943
IEA
PLAZA Integrative Orthologycarboxylic acid transmembrane transporter activity AT2G32040
GO:0008514
IEA
PLAZA Integrative Orthologyorganic anion transmembrane transporter activity AT2G32040
GO:0072349
IEA
PLAZA Integrative Orthologymodified amino acid transmembrane transporter activity AT2G32040
GO:0005310
IEA
PLAZA Integrative Orthologydicarboxylic acid transmembrane transporter activity AT2G32040
GO:0015350
IEA
EggNOGmappermethotrexate transmembrane transporter activity
GO:0015075
IEA
PLAZA Integrative Orthologyion transmembrane transporter activity AT2G32040
GO:0015231
IEA
EggNOGmapper5-formyltetrahydrofolate transmembrane transporter activity
GO:0051184
IEA
EggNOGmappercofactor transmembrane transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
EggNOGmapperintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT2G32040
GO:0031967
IEA
PLAZA Integrative Orthologyorganelle envelope AT2G32040
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular AT2G32040
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part AT2G32040
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part AT2G32040
GO:0044464
IEA
PLAZA Integrative Orthologycell part AT2G32040
GO:0009941
IEA
EggNOGmapperchloroplast envelope
GO:0031975
IEA
PLAZA Integrative Orthologyenvelope AT2G32040
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT2G32040
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part AT2G32040
GO:0009526
IEA
PLAZA Integrative Orthologyplastid envelope AT2G32040
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part AT2G32040
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT2G32040
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT2G32040
GO:0005623
IEA
PLAZA Integrative Orthologycell AT2G32040
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle AT2G32040
GO:0044435
IEA
PLAZA Integrative Orthologyplastid part AT2G32040
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle AT2G32040
GO:0044434
IEA
PLAZA Integrative Orthologychloroplast part AT2G32040
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle AT2G32040
GO:0031969
IEA
EggNOGmapperchloroplast membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004324Folate-biopterin transporter
IPR020846Major facilitator superfamily domain

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.