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Functional clusters
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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps211660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps211660
Thalassiosira pseudonana
1.1e-92
340.5
162
100.0
tho592300
Thalassiosira oceanica
2.4e-26
120.2
118
50.0
CC00G57010
Cyclotella cryptica
1.3e-24
114.4
115
44.3
tps71590
Thalassiosira pseudonana
6.6e-24
112.1
113
44.2
CC00G26170
Cyclotella cryptica
1.5e-23
110.9
147
40.1
CC00G64720
Cyclotella cryptica
1.5e-23
110.9
150
40.7
fso168420
Fistulifera solaris
2.5e-23
110.2
127
43.3
fso151960
Fistulifera solaris
1.6e-22
107.5
127
41.7
sya00G43360
Synedra acus
6.2e-22
105.5
111
45.0
CC00G198070
Cyclotella cryptica
8.1e-22
105.1
147
39.5
Sro107_g054050
Seminavis robusta
1.1e-21
104.8
127
39.4
sya00G205170
Synedra acus
1.1e-21
104.8
151
39.7
tho196600
Thalassiosira oceanica
3.1e-21
103.2
108
43.5
CC00G125810
Cyclotella cryptica
2.0e-20
100.5
115
37.4
ptri32460
Phaeodactylum tricornutum
3.4e-20
99.8
124
42.7
ptri229170
Phaeodactylum tricornutum
3.4e-20
99.8
122
40.2
Sro506_g156280
Seminavis robusta
7.6e-20
98.6
119
38.7
Sro1228_g254370
Seminavis robusta
9.9e-20
98.2
107
43.0
tho194020
Thalassiosira oceanica
9.9e-20
98.2
127
34.6
tps169550
Thalassiosira pseudonana
9.9e-20
98.2
154
38.3
fso33230
Fistulifera solaris
2.2e-19
97.1
103
43.7
sya00G242440
Synedra acus
2.9e-19
96.7
127
40.2
tps38520
Thalassiosira pseudonana
2.9e-19
96.7
127
34.6
CC00G196020
Cyclotella cryptica
3.8e-19
96.3
126
34.9
tho20540
Thalassiosira oceanica
3.8e-19
96.3
123
35.8
fso123550
Fistulifera solaris
4.9e-19
95.9
118
33.9
ptri223580
Phaeodactylum tricornutum
6.4e-19
95.5
119
34.5
tps150290
Thalassiosira pseudonana
6.4e-19
95.5
109
37.6
fso54280
Fistulifera solaris
1.4e-18
94.4
118
33.1
Sro374_g129180
Seminavis robusta
1.9e-18
94.0
140
36.4
ptri223660
Phaeodactylum tricornutum
4.2e-18
92.8
112
37.5
CC00G172280
Cyclotella cryptica
7.1e-18
92.0
145
36.6
ptri21090
Phaeodactylum tricornutum
7.1e-18
92.0
121
40.5
tho314880
Thalassiosira oceanica
7.1e-18
92.0
117
35.9
ptri226930
Phaeodactylum tricornutum
1.6e-17
90.9
160
33.8
PSNMU-V1.4_AUG-EV-PASAV3_0005510
Pseudo-nitzschia multistriata
2.1e-17
90.5
142
36.6
gene16545
Fragilariopsis cylindrus
3.5e-17
89.7
126
33.3
sya00G52670
Synedra acus
3.5e-17
89.7
107
44.9
ps00G168960
Pseudo-nitzschia multiseries
6.0e-17
89.0
116
37.9
Sro1512_g278790
Seminavis robusta
6.0e-17
89.0
110
40.0
gene13799
Fragilariopsis cylindrus
7.8e-17
88.6
125
37.6
ps00G155910
Pseudo-nitzschia multiseries
7.8e-17
88.6
119
35.3
Sro748_g196620
Seminavis robusta
7.8e-17
88.6
129
34.1
sya00G17600
Synedra acus
7.8e-17
88.6
125
34.4
CC00G136890
Cyclotella cryptica
1.0e-16
88.2
112
38.4
ps00G01920
Pseudo-nitzschia multiseries
1.0e-16
88.2
125
34.4
CC00G09230
Cyclotella cryptica
1.3e-16
87.8
119
40.3
ptri211550
Phaeodactylum tricornutum
1.3e-16
87.8
110
39.1
Sro245_g097390
Seminavis robusta
1.3e-16
87.8
139
37.4
PSNMU-V1.4_AUG-EV-PASAV3_0074230
Pseudo-nitzschia multistriata
1.7e-16
87.4
128
36.7
Sro975_g226830
Seminavis robusta
1.7e-16
87.4
121
35.5
tps209500
Thalassiosira pseudonana
1.7e-16
87.4
120
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0030110
Pseudo-nitzschia multistriata
2.3e-16
87.0
125
33.6
Sro672_g185130
Seminavis robusta
2.3e-16
87.0
125
36.0
CC00G96200
Cyclotella cryptica
5.1e-16
85.9
132
31.8
gene6749
Fragilariopsis cylindrus
5.1e-16
85.9
124
32.3
Sro776_g200900
Seminavis robusta
5.1e-16
85.9
118
36.4
tps170710
Thalassiosira pseudonana
5.1e-16
85.9
113
35.4
gene6405
Fragilariopsis cylindrus
6.6e-16
85.5
128
33.6
fso89100
Fistulifera solaris
6.6e-16
85.5
126
38.1
sya00G264280
Synedra acus
6.6e-16
85.5
130
33.8
sya00G256570
Synedra acus
8.7e-16
85.1
114
36.0
tps170450
Thalassiosira pseudonana
8.7e-16
85.1
128
39.1
ps00G185300
Pseudo-nitzschia multiseries
1.1e-15
84.7
117
37.6
sya00G25330
Synedra acus
1.1e-15
84.7
120
38.3
CC00G13180
Cyclotella cryptica
1.5e-15
84.3
125
36.8
fso08560
Fistulifera solaris
1.5e-15
84.3
115
37.4
Sro299_g111520
Seminavis robusta
1.9e-15
84.0
124
35.5
sya00G53380
Synedra acus
1.9e-15
84.0
110
37.3
tps64700
Thalassiosira pseudonana
1.9e-15
84.0
152
34.2
fso98040
Fistulifera solaris
2.5e-15
83.6
118
34.7
sya00G117100
Synedra acus
2.5e-15
83.6
120
38.3
tps126430
Thalassiosira pseudonana
2.5e-15
83.6
155
33.5
CC00G13870
Cyclotella cryptica
3.3e-15
83.2
139
33.8
gene9793
Fragilariopsis cylindrus
3.3e-15
83.2
118
32.2
Sro458_g147090
Seminavis robusta
5.6e-15
82.4
110
39.1
fso143640
Fistulifera solaris
7.3e-15
82.0
154
30.5
sya00G230590
Synedra acus
7.3e-15
82.0
126
37.3
tps120810
Thalassiosira pseudonana
7.3e-15
82.0
110
34.5
tps97340
Thalassiosira pseudonana
9.6e-15
81.6
162
29.6
gene7436
Fragilariopsis cylindrus
1.2e-14
81.3
117
38.5
fso90480
Fistulifera solaris
1.2e-14
81.3
120
38.3
fso113910
Fistulifera solaris
1.2e-14
81.3
110
35.5
ptri228830
Phaeodactylum tricornutum
1.2e-14
81.3
115
36.5
sya00G128810
Synedra acus
1.2e-14
81.3
126
36.5
fso62790
Fistulifera solaris
1.6e-14
80.9
118
33.9
Sro176_g077270
Seminavis robusta
1.6e-14
80.9
115
28.7
fso11540
Fistulifera solaris
2.1e-14
80.5
110
35.5
Sro57_g033130
Seminavis robusta
2.1e-14
80.5
162
30.9
gene17789
Fragilariopsis cylindrus
2.8e-14
80.1
110
38.2
Sro299_g111490
Seminavis robusta
2.8e-14
80.1
120
39.2
fso39760
Fistulifera solaris
3.6e-14
79.7
112
40.2
Sro560_g166640
Seminavis robusta
3.6e-14
79.7
121
33.1
CC00G134640
Cyclotella cryptica
4.7e-14
79.3
117
35.9
fso109690
Fistulifera solaris
4.7e-14
79.3
120
38.3
PSNMU-V1.4_AUG-EV-PASAV3_0081540
Pseudo-nitzschia multistriata
4.7e-14
79.3
116
35.3
Sro844_g209850
Seminavis robusta
4.7e-14
79.3
151
32.5
ps00G192350
Pseudo-nitzschia multiseries
6.2e-14
79.0
107
40.2
Sro3210_g345280
Seminavis robusta
6.2e-14
79.0
125
32.8
Sro1353_g265400
Seminavis robusta
6.2e-14
79.0
120
38.3
Sro299_g111270
Seminavis robusta
6.2e-14
79.0
125
32.8
fso123570
Fistulifera solaris
8.1e-14
78.6
107
35.5
sya00G242400
Synedra acus
8.1e-14
78.6
108
34.3
CC00G113840
Cyclotella cryptica
1.1e-13
78.2
114
34.2
fso15630
Fistulifera solaris
1.1e-13
78.2
129
32.6
Sro299_g111510
Seminavis robusta
1.4e-13
77.8
126
36.5
gene16432
Fragilariopsis cylindrus
1.8e-13
77.4
132
34.1
fso125600
Fistulifera solaris
1.8e-13
77.4
120
36.7
ps00G135050
Pseudo-nitzschia multiseries
1.8e-13
77.4
119
34.5
Sro776_g200870
Seminavis robusta
1.8e-13
77.4
137
29.2
Sro756_g197840
Seminavis robusta
2.4e-13
77.0
127
33.1
AA0017G01530
Aureococcus anophagefferens
3.1e-13
76.6
122
27.0
tps144100
Thalassiosira pseudonana
3.1e-13
76.6
113
33.6
tps32140
Thalassiosira pseudonana
4.0e-13
76.3
114
33.3
CC00G47830
Cyclotella cryptica
5.3e-13
75.9
123
32.5
CC00G79300
Cyclotella cryptica
5.3e-13
75.9
123
32.5
Sro1087_g239840
Seminavis robusta
6.9e-13
75.5
125
32.8
tps64680
Thalassiosira pseudonana
6.9e-13
75.5
122
33.6
ps00G78480
Pseudo-nitzschia multiseries
9.0e-13
75.1
130
34.6
tps64720
Thalassiosira pseudonana
1.2e-12
74.7
131
34.4
ps00G96090
Pseudo-nitzschia multiseries
1.5e-12
74.3
152
28.3
AA0008G00810
Aureococcus anophagefferens
2.0e-12
73.9
103
35.9
CC00G32860
Cyclotella cryptica
2.6e-12
73.6
109
36.7
CC00G152580
Cyclotella cryptica
2.6e-12
73.6
109
36.7
Sro299_g111340
Seminavis robusta
2.6e-12
73.6
116
31.9
gene3187
Fragilariopsis cylindrus
3.4e-12
73.2
128
35.9
ptri21940
Phaeodactylum tricornutum
3.4e-12
73.2
140
30.7
gene10828
Fragilariopsis cylindrus
5.8e-12
72.4
135
30.4
tps31050
Thalassiosira pseudonana
5.8e-12
72.4
122
32.0
tps105880
Thalassiosira pseudonana
5.8e-12
72.4
125
33.6
fso140540
Fistulifera solaris
9.9e-12
71.6
125
30.4
AA0009G02010
Aureococcus anophagefferens
1.3e-11
71.2
116
31.9
CC00G21330
Cyclotella cryptica
1.3e-11
71.2
139
34.5
fso143570
Fistulifera solaris
1.3e-11
71.2
117
34.2
fso180330
Fistulifera solaris
1.3e-11
71.2
121
31.4
fso184000
Fistulifera solaris
1.3e-11
71.2
108
35.2
tho110160
Thalassiosira oceanica
1.3e-11
71.2
121
30.6
ptri158990
Phaeodactylum tricornutum
1.7e-11
70.9
126
31.0
sya00G204800
Synedra acus
1.7e-11
70.9
139
29.5
tho132960
Thalassiosira oceanica
1.7e-11
70.9
114
37.7
tps31090
Thalassiosira pseudonana
1.7e-11
70.9
120
30.8
Sro299_g111360
Seminavis robusta
2.2e-11
70.5
136
33.1
Sro1294_g260200
Seminavis robusta
2.2e-11
70.5
111
37.8
Sro2349_g324350
Seminavis robusta
2.9e-11
70.1
134
32.1
Sro427_g140660
Seminavis robusta
2.9e-11
70.1
134
32.1
tho222020
Thalassiosira oceanica
2.9e-11
70.1
139
32.4
CC00G127850
Cyclotella cryptica
3.8e-11
69.7
111
31.5
ptri64980
Phaeodactylum tricornutum
3.8e-11
69.7
124
29.0
Sro555_g165810
Seminavis robusta
3.8e-11
69.7
173
28.3
tps29430
Thalassiosira pseudonana
4.9e-11
69.3
119
31.1
tps106360
Thalassiosira pseudonana
4.9e-11
69.3
118
36.4
CC00G11110
Cyclotella cryptica
6.4e-11
68.9
126
32.5
CC00G139230
Cyclotella cryptica
6.4e-11
68.9
127
28.3
CC00G124300
Cyclotella cryptica
8.4e-11
68.6
146
26.0
CC00G154580
Cyclotella cryptica
8.4e-11
68.6
121
30.6
fso184930
Fistulifera solaris
8.4e-11
68.6
121
31.4
fso179420
Fistulifera solaris
1.1e-10
68.2
108
32.4
Pp3c15_17470
Physcomitrella patens
1.1e-10
68.2
118
32.2
Sro2055_g312830
Seminavis robusta
1.1e-10
68.2
162
32.7
CC00G51700
Cyclotella cryptica
1.4e-10
67.8
103
35.9
tps192360
Thalassiosira pseudonana
1.9e-10
67.4
130
30.8
tps29530
Thalassiosira pseudonana
3.2e-10
66.6
119
30.3
CC00G175600
Cyclotella cryptica
4.2e-10
66.2
110
31.8
sya00G02940
Synedra acus
4.2e-10
66.2
122
31.1
sya00G05790
Synedra acus
4.2e-10
66.2
114
29.8
tps118120
Thalassiosira pseudonana
4.2e-10
66.2
89
37.1
tps102120
Thalassiosira pseudonana
7.1e-10
65.5
116
33.6
CC00G11640
Cyclotella cryptica
9.3e-10
65.1
126
29.4
FBgn0010315
Drosophila melanogaster
1.2e-09
64.7
134
29.9
tho256100
Thalassiosira oceanica
1.2e-09
64.7
115
31.3
tps105860
Thalassiosira pseudonana
1.2e-09
64.7
112
35.7
CC00G20710
Cyclotella cryptica
2.7e-09
63.5
156
33.3
fso182460
Fistulifera solaris
2.7e-09
63.5
113
32.7
ps00G49760
Pseudo-nitzschia multiseries
2.7e-09
63.5
163
28.8
ptri09700
Phaeodactylum tricornutum
2.7e-09
63.5
120
25.8
CC00G82150
Cyclotella cryptica
3.5e-09
63.2
84
42.9
fso195520
Fistulifera solaris
3.5e-09
63.2
122
27.0
sya00G156000
Synedra acus
3.5e-09
63.2
129
33.3
AA0012G01350
Aureococcus anophagefferens
4.6e-09
62.8
107
30.8
tho224000
Thalassiosira oceanica
4.6e-09
62.8
106
34.0
fso181370
Fistulifera solaris
6.0e-09
62.4
113
31.0
ps00G113470
Pseudo-nitzschia multiseries
6.0e-09
62.4
109
33.0
tps217010
Thalassiosira pseudonana
6.0e-09
62.4
96
37.5
CC00G122630
Cyclotella cryptica
7.8e-09
62.0
121
30.6
PSNMU-V1.4_AUG-EV-PASAV3_0066060
Pseudo-nitzschia multistriata
7.8e-09
62.0
176
25.6
tho390780
Thalassiosira oceanica
7.8e-09
62.0
125
28.8
tho421300
Thalassiosira oceanica
1.3e-08
61.2
115
28.7
tps109520
Thalassiosira pseudonana
1.3e-08
61.2
133
28.6
fso180370
Fistulifera solaris
2.3e-08
60.5
140
27.1
Sro1087_g239830
Seminavis robusta
3.0e-08
60.1
129
28.7
fso139480
Fistulifera solaris
3.9e-08
59.7
110
28.2
tho25160
Thalassiosira oceanica
3.9e-08
59.7
143
26.6
fso184970
Fistulifera solaris
6.6e-08
58.9
140
27.1
tho66420
Thalassiosira oceanica
6.6e-08
58.9
118
34.7
tps225460
Thalassiosira pseudonana
6.6e-08
58.9
116
31.9
CC00G168640
Cyclotella cryptica
1.1e-07
58.2
135
28.1
gene5301
Fragilariopsis cylindrus
1.1e-07
58.2
113
31.0
CC00G06430
Cyclotella cryptica
1.9e-07
57.4
115
27.8
tho183840
Thalassiosira oceanica
1.9e-07
57.4
108
29.6
WBGene00000870
Caenorhabditis elegans
2.5e-07
57.0
114
27.2
tho270080
Thalassiosira oceanica
2.5e-07
57.0
143
28.0
AT2G22490
Arabidopsis thaliana
3.3e-07
56.6
122
30.3
PSNMU-V1.4_AUG-EV-PASAV3_0054510
Pseudo-nitzschia multistriata
3.3e-07
56.6
120
26.7
tps204250
Thalassiosira pseudonana
3.3e-07
56.6
155
23.2
Naga_100139g11
Nannochloropsis gaditana
5.6e-07
55.8
125
25.6
sya00G242410
Synedra acus
5.6e-07
55.8
81
38.3
ENSG00000110092
Homo sapiens
7.3e-07
55.5
127
22.0
pte540220
Paramecium tetraurelia
9.6e-07
55.1
125
26.4
tho332820
Thalassiosira oceanica
9.6e-07
55.1
157
27.4
ps00G57180
Pseudo-nitzschia multiseries
1.6e-06
54.3
62
40.3
gene20940
Fragilariopsis cylindrus
2.1e-06
53.9
120
25.0
gene10181
Fragilariopsis cylindrus
2.1e-06
53.9
120
25.0
tho102120
Thalassiosira oceanica
2.1e-06
53.9
128
24.2
tho191880
Thalassiosira oceanica
4.8e-06
52.8
66
37.9
tps225440
Thalassiosira pseudonana
6.2e-06
52.4
104
30.8
ENSG00000113328
Homo sapiens
8.1e-06
52.0
109
28.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (12 genes)
Thalassiosira pseudonana (31 genes)
Thalassiosira oceanica (19 genes)
Pseudo-nitzschia multiseries (11 genes)
Fistulifera solaris (30 genes)
Fragilariopsis cylindrus (13 genes)
Cyclotella cryptica (32 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (32 genes)
Synedra acus (18 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing