Gene: tps144100 (Thalassiosira pseudonana)

Overview top

Gene Identifier
tps144100
Transcript Identifier
tps144100.1
Gene Type
Coding gene
Location
4 : 2316752-2318224 : positive

Family Information

Homologous gene family
HOM02SEM000091
(246 genes in 12 species)
specific family

Descriptions

gene_descr
predicted protein
eggnog_description
Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity)

Identifiers

Type Value
pidEED93105
old_giTHAPSDRAFT_22495
UniprotB8C0Q2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009719
IEA
EggNOGmapperresponse to endogenous stimulus
GO:0051329
IEA
EggNOGmappermitotic interphase
GO:0006898
IEA
EggNOGmapperreceptor-mediated endocytosis
GO:0008361
IEA
EggNOGmapperregulation of cell size
GO:0009790
IEA
EggNOGmapperembryo development
GO:0006357
IEA
EggNOGmapperregulation of transcription by RNA polymerase II
GO:0071900
IEA
EggNOGmapperregulation of protein serine/threonine kinase activity
GO:0060429
IEA
EggNOGmapperepithelium development
GO:0040010
IEA
EggNOGmapperpositive regulation of growth rate
GO:0000711
IEA
EggNOGmappermeiotic DNA repair synthesis
GO:0061025
IEA
EggNOGmappermembrane fusion
GO:0051783
IEA
EggNOGmapperregulation of nuclear division
GO:0000754
IEA
EggNOGmapperadaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion
GO:0006302
IEA
EggNOGmapperdouble-strand break repair
GO:0042981
IEA
EggNOGmapperregulation of apoptotic process
GO:0009249
IEA
EggNOGmapperprotein lipoylation
GO:0007417
IEA
EggNOGmappercentral nervous system development
GO:0007283
IEA
EggNOGmapperspermatogenesis
GO:0031572
IEA
EggNOGmapperG2 DNA damage checkpoint
GO:0010243
IEA
EggNOGmapperresponse to organonitrogen compound
GO:0007096
IEA
EggNOGmapperregulation of exit from mitosis
GO:2000045
IEA
EggNOGmapperregulation of G1/S transition of mitotic cell cycle
GO:0002119
IEA
EggNOGmappernematode larval development
GO:0000321
IEA
EggNOGmapperre-entry into mitotic cell cycle after pheromone arrest
GO:0007095
IEA
EggNOGmappermitotic G2 DNA damage checkpoint
GO:0042144
IEA
EggNOGmappervacuole fusion, non-autophagic
GO:0007127
IEA
EggNOGmappermeiosis I
GO:0018065
IEA
EggNOGmapperprotein-cofactor linkage
GO:0007143
IEA
EggNOGmapperfemale meiotic nuclear division
GO:0040018
IEA
EggNOGmapperpositive regulation of multicellular organism growth
GO:2000134
IEA
EggNOGmappernegative regulation of G1/S transition of mitotic cell cycle
GO:0000083
IEA
EggNOGmapperregulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0043066
IEA
EggNOGmappernegative regulation of apoptotic process
GO:0016049
IEA
EggNOGmappercell growth
GO:0009653
IEA
EggNOGmapperanatomical structure morphogenesis
GO:0000079
IEA
EggNOGmapperregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000731
IEA
EggNOGmapperDNA synthesis involved in DNA repair
GO:0048646
IEA
EggNOGmapperanatomical structure formation involved in morphogenesis
GO:0006949
IEA
EggNOGmappersyncytium formation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016538
IEA
EggNOGmappercyclin-dependent protein serine/threonine kinase regulator activity
GO:0019904
IEA
EggNOGmapperprotein domain specific binding
GO:0016874
IEA
EggNOGmapperligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
EggNOGmappernucleus
GO:0005634
IEA
InterPronucleus
GO:0030425
IEA
EggNOGmapperdendrite
GO:0000307
IEA
EggNOGmappercyclin-dependent protein kinase holoenzyme complex
GO:0009507
IEA
EggNOGmapperchloroplast
GO:0005829
IEA
EggNOGmappercytosol
GO:0005739
IEA
EggNOGmappermitochondrion
GO:0048471
IEA
EggNOGmapperperinuclear region of cytoplasm
GO:0005700
IEA
EggNOGmapperpolytene chromosome
GO:0043025
IEA
EggNOGmapperneuronal cell body

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013763Cyclin-like
IPR006671Cyclin, N-terminal
IPR004367Cyclin, C-terminal domain

No MapMan annotations defined for this gene.
KeggID Description
K03801lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
K17423MRPL42; large subunit ribosomal protein L42
K06646CLN3; G1/S-specific cyclin CLN3
K06650CLN2; G1/S-specific cyclin CLN2
K10145CCNG1; cyclin G1
K10146CCNG2; cyclin G2
K12760CLN1; G1/S-specific cyclin CLN1
No chloroplast target sequence found.